RNA–Protein interactions for RNA: YLL011W

SOF1, Transcript of Protein required for biogenesis of 40S (small) ribosomal subunit, yeastyeast

Gene SOF1, Length 1,470 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOF1YLL011W YEN1P40028 759 aa5.62□□□□□ -1.51
SOF1YLL011W MSH4P40965 878 aaPredicted RBP5.62□□□□□ -1.51
SOF1YLL011W TIM54P47045 478 aa5.62□□□□□ -1.51
SOF1YLL011W TY1A-JR2P47099 440 aa5.62□□□□□ -1.51
SOF1YLL011W SUT1P53032 299 aaKnown RBP5.62□□□□□ -1.51
SOF1YLL011W GDE1Q02979 1223 aa5.62□□□□□ -1.51
SOF1YLL011W TY1A-DR1Q03856 440 aa5.62□□□□□ -1.51
SOF1YLL011W CAB1Q04430 367 aa5.62□□□□□ -1.51
SOF1YLL011W TY1A-ML1Q04706 440 aaKnown RBP5.62□□□□□ -1.51
SOF1YLL011W TY1A-BRQ12217 440 aa5.62□□□□□ -1.51
SOF1YLL011W TY1A-NL2Q12470 440 aa5.62□□□□□ -1.51
SOF1YLL011W TY1A-GR2Q12485 440 aa5.62□□□□□ -1.51
SOF1YLL011W SEC2P17065 759 aa5.61□□□□□ -1.51
SOF1YLL011W FAA3P39002 694 aa5.61□□□□□ -1.51
SOF1YLL011W SAM37P50110 327 aa5.61□□□□□ -1.51
SOF1YLL011W CDC55Q00362 526 aa5.61□□□□□ -1.51
SOF1YLL011W JIP4Q03361 876 aa5.61□□□□□ -1.51
SOF1YLL011W UTP14Q04500 899 aaKnown RBP5.61□□□□□ -1.51
SOF1YLL011W PPM2Q08282 695 aa5.61□□□□□ -1.51
SOF1YLL011W PHO8P11491 566 aa5.6□□□□□ -1.51
SOF1YLL011W VAC17P25591 423 aa5.6□□□□□ -1.51
SOF1YLL011W KTR2P33550 425 aa5.6□□□□□ -1.51
SOF1YLL011W EAP1P36041 632 aaKnown RBP5.6□□□□□ -1.51
SOF1YLL011W NAB3P38996 802 aaKnown RBP RIP-Chip data5.6□□□□□ -1.51not detected
SOF1YLL011W FAA4P47912 694 aaKnown RBP5.6□□□□□ -1.51
SOF1YLL011W YNL011CP53980 444 aa5.6□□□□□ -1.51
SOF1YLL011W BUD4P47136 1447 aa5.6□□□□□ -1.51
SOF1YLL011W SWI5P08153 709 aa5.59□□□□□ -1.51
SOF1YLL011W GRX7P38068 203 aa5.59□□□□□ -1.51
SOF1YLL011W YHL008CP38750 627 aa5.59□□□□□ -1.51
SOF1YLL011W KXD1P53158 218 aa5.59□□□□□ -1.51
SOF1YLL011W NAN1Q02931 896 aaKnown RBP5.59□□□□□ -1.51
SOF1YLL011W TDA5Q06417 326 aaKnown RBP5.59□□□□□ -1.51
SOF1YLL011W ATG20Q07528 640 aa5.59□□□□□ -1.51
SOF1YLL011W GIN4Q12263 1142 aa5.59□□□□□ -1.51
SOF1YLL011W HXK1P04806 485 aaKnown RBP5.58□□□□□ -1.52
SOF1YLL011W SSD1P24276 1250 aaKnown RBP RIP-Chip data5.58□□□□□ -1.52not detected
SOF1YLL011W CIC1P38779 376 aaKnown RBP5.58□□□□□ -1.52
SOF1YLL011W FKH1P40466 484 aa5.58□□□□□ -1.52
SOF1YLL011W THO2P53552 1597 aaKnown RBP5.58□□□□□ -1.52
SOF1YLL011W SRM1P21827 482 aa5.58□□□□□ -1.52
SOF1YLL011W NOP2P40991 618 aaKnown RBP5.58□□□□□ -1.52
SOF1YLL011W ZDS1P50111 915 aaKnown RBP5.58□□□□□ -1.52
SOF1YLL011W NOC3Q07896 663 aaPredicted RBP5.58□□□□□ -1.52
SOF1YLL011W YLR125WQ12138 136 aa5.58□□□□□ -1.52
SOF1YLL011W HIR3P47171 1648 aa5.57□□□□□ -1.52
SOF1YLL011W CRP1P38845 465 aaKnown RBP5.57□□□□□ -1.52
SOF1YLL011W SPF1P39986 1215 aaKnown RBP5.57□□□□□ -1.52
SOF1YLL011W HXT10P43581 546 aa5.57□□□□□ -1.52
SOF1YLL011W CDC34P14682 295 aa5.56□□□□□ -1.52
SOF1YLL011W THI4P32318 326 aa5.56□□□□□ -1.52
SOF1YLL011W YKL069WP36088 180 aa5.56□□□□□ -1.52
SOF1YLL011W ELP4Q02884 456 aaKnown RBP5.56□□□□□ -1.52
SOF1YLL011W DAL4Q04895 635 aa5.56□□□□□ -1.52
SOF1YLL011W OPI10Q08202 246 aa5.56□□□□□ -1.52
SOF1YLL011W MDS3P53094 1487 aa5.55□□□□□ -1.52
SOF1YLL011W YHR020WP38708 688 aaKnown RBP5.55□□□□□ -1.52
SOF1YLL011W CHZ1P40019 153 aaPredicted RBP5.55□□□□□ -1.52
SOF1YLL011W RRN7P40992 514 aa5.55□□□□□ -1.52
SOF1YLL011W MRPS18P42847 217 aa5.55□□□□□ -1.52
SOF1YLL011W TYW3P53177 273 aa5.55□□□□□ -1.52
SOF1YLL011W DNM1P54861 757 aa5.55□□□□□ -1.52
SOF1YLL011W BSC2Q05611 235 aa5.55□□□□□ -1.52
SOF1YLL011W KIP2P28743 706 aa5.54□□□□□ -1.52
SOF1YLL011W UTR2P32623 467 aa5.54□□□□□ -1.52
SOF1YLL011W SEC6P32844 805 aa5.54□□□□□ -1.52
SOF1YLL011W TIF11P38912 153 aaKnown RBP5.54□□□□□ -1.52
SOF1YLL011W ECM16Q04217 1267 aaKnown RBP5.54□□□□□ -1.52
SOF1YLL011W BUD20Q08004 166 aaPredicted RBP5.54□□□□□ -1.52
SOF1YLL011W FLC1Q08967 793 aa5.54□□□□□ -1.52
SOF1YLL011W BMT6Q12291 365 aa5.54□□□□□ -1.52
SOF1YLL011W ERR1P0CX10 437 aa5.53□□□□□ -1.52
SOF1YLL011W ERR2P0CX11 437 aa5.53□□□□□ -1.52
SOF1YLL011W MRPL33P20084 86 aa5.53□□□□□ -1.52
SOF1YLL011W PRE9P23638 258 aaKnown RBP5.53□□□□□ -1.52
SOF1YLL011W RRD1P40454 393 aaKnown RBP5.53□□□□□ -1.52
SOF1YLL011W MCD1Q12158 566 aa5.53□□□□□ -1.52
SOF1YLL011W CCP1P00431 361 aa5.52□□□□□ -1.53
SOF1YLL011W SMC1P32908 1225 aa5.52□□□□□ -1.53
SOF1YLL011W DUT1P33317 147 aa5.52□□□□□ -1.53
SOF1YLL011W HXT5P38695 592 aa5.52□□□□□ -1.53
SOF1YLL011W RSP5P39940 809 aaKnown RBP5.52□□□□□ -1.53
SOF1YLL011W YGR053CP53234 283 aa5.52□□□□□ -1.53
SOF1YLL011W FOL1P53848 824 aa5.52□□□□□ -1.53
SOF1YLL011W RSC4Q02206 625 aa5.52□□□□□ -1.53
SOF1YLL011W INP54Q08227 384 aaKnown RBP5.52□□□□□ -1.53
SOF1YLL011W FAL1Q12099 399 aaKnown RBP5.52□□□□□ -1.53
SOF1YLL011W NOP14Q99207 810 aaKnown RBP5.52□□□□□ -1.53
SOF1YLL011W ADR1P07248 1323 aa5.52□□□□□ -1.53
SOF1YLL011W KAR1P11927 433 aa5.51□□□□□ -1.53
SOF1YLL011W ENP1P38333 483 aaKnown RBP5.51□□□□□ -1.53
SOF1YLL011W HXT8P40886 569 aa5.51□□□□□ -1.53
SOF1YLL011W YDL121CQ07541 149 aa5.51□□□□□ -1.53
SOF1YLL011W YGR125WP53273 1036 aa5.51□□□□□ -1.53
SOF1YLL011W DAT1P13483 248 aaKnown RBP5.5□□□□□ -1.53
SOF1YLL011W GAL11P19659 1081 aa5.5□□□□□ -1.53
SOF1YLL011W BAS1P22035 811 aa5.5□□□□□ -1.53
SOF1YLL011W RAD27P26793 382 aa5.5□□□□□ -1.53
SOF1YLL011W TPD3P31383 635 aa5.5□□□□□ -1.53
SOF1YLL011W PRP40P33203 583 aaKnown RBP5.5□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 33.2 ms