RNA–Protein interactions for RNA: YDR392W

SPT3, Transcript of Subunit of the SAGA and SAGA-like transcriptional regulatory complexes, yeastyeast

Gene SPT3, Length 1,014 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT3YDR392W RPA14P50106 137 aa7.77□□□□□ -1.17
SPT3YDR392W KIN4Q01919 800 aa7.77□□□□□ -1.17
SPT3YDR392W ALR1Q08269 859 aa7.77□□□□□ -1.17
SPT3YDR392W YKL222CP35995 705 aa7.76□□□□□ -1.17
SPT3YDR392W BUB1P41695 1021 aaKnown RBP RIP-Chip data7.76□□□□□ -1.17not detected
SPT3YDR392W YPR097WQ06839 1073 aa7.76□□□□□ -1.17
SPT3YDR392W PRP5P21372 849 aaPredicted RBP7.75□□□□□ -1.17
SPT3YDR392W DLD1P32891 587 aa7.75□□□□□ -1.17
SPT3YDR392W YKR075CP36155 307 aa7.75□□□□□ -1.17
SPT3YDR392W MMP1Q12372 583 aa7.75□□□□□ -1.17
SPT3YDR392W COBP00163 385 aa7.74□□□□□ -1.17
SPT3YDR392W YJR115WP47152 169 aa7.73□□□□□ -1.17
SPT3YDR392W YNR021WP53723 404 aaKnown RBP7.73□□□□□ -1.17
SPT3YDR392W LCB5Q06147 687 aaKnown RBP7.73□□□□□ -1.17
SPT3YDR392W YDL206WQ12424 762 aa7.73□□□□□ -1.17
SPT3YDR392W RET1P22276 1149 aaKnown RBP7.72□□□□□ -1.17
SPT3YDR392W SCJ1P25303 377 aa7.72□□□□□ -1.17
SPT3YDR392W KIP2P28743 706 aa7.72□□□□□ -1.17
SPT3YDR392W MSB3P48566 633 aaPredicted RBP7.72□□□□□ -1.17
SPT3YDR392W CUP1-1P0CX80 61 aa7.71□□□□□ -1.18
SPT3YDR392W CUP1-2P0CX81 61 aa7.71□□□□□ -1.18
SPT3YDR392W TEL1P38110 2787 aa7.71□□□□□ -1.18
SPT3YDR392W TRM1P15565 570 aaKnown RBP7.7□□□□□ -1.18
SPT3YDR392W RTG2P32608 588 aaKnown RBP7.7□□□□□ -1.18
SPT3YDR392W TOS1P38288 455 aa7.7□□□□□ -1.18
SPT3YDR392W FBP1P09201 348 aa7.69□□□□□ -1.18
SPT3YDR392W UGA3P26370 528 aa7.69□□□□□ -1.18
SPT3YDR392W YIL089WP40500 205 aa7.69□□□□□ -1.18
SPT3YDR392W NYV1Q12255 253 aa7.69□□□□□ -1.18
SPT3YDR392W IXR1P33417 597 aa7.68□□□□□ -1.18
SPT3YDR392W ERT1P38140 529 aa7.67□□□□□ -1.18
SPT3YDR392W EAR1Q03212 550 aa7.67□□□□□ -1.18
SPT3YDR392W TAF7Q05021 590 aa7.67□□□□□ -1.18
SPT3YDR392W CWH41P53008 833 aa7.66□□□□□ -1.18
SPT3YDR392W YRF1-4O13559 1382 aa7.66□□□□□ -1.18
SPT3YDR392W YKL133CP36066 463 aa7.65□□□□□ -1.18
SPT3YDR392W BUG1Q12191 341 aa7.65□□□□□ -1.18
SPT3YDR392W GLC3P32775 704 aa7.64□□□□□ -1.19
SPT3YDR392W MRT4P33201 236 aaKnown RBP7.64□□□□□ -1.19
SPT3YDR392W RRT14P40470 206 aa7.64□□□□□ -1.19
SPT3YDR392W HPC2Q01448 625 aa7.64□□□□□ -1.19
SPT3YDR392W BUD21Q08492 214 aaPredicted RBP7.64□□□□□ -1.19
SPT3YDR392W YIL177CP40434 1758 aa7.64□□□□□ -1.19
SPT3YDR392W YJL225CP40889 1758 aa7.64□□□□□ -1.19
SPT3YDR392W ESS1P22696 170 aa7.63□□□□□ -1.19
SPT3YDR392W YLR346CQ06139 101 aa7.63□□□□□ -1.19
SPT3YDR392W TCB1Q12466 1186 aa7.63□□□□□ -1.19
SPT3YDR392W RPS9BP05755 195 aaKnown RBP7.62□□□□□ -1.19
SPT3YDR392W AIM7Q12156 149 aa7.62□□□□□ -1.19
SPT3YDR392W PTK2P47116 818 aaKnown RBP7.61□□□□□ -1.19
SPT3YDR392W UTP22P53254 1237 aaPredicted RBP7.61□□□□□ -1.19
SPT3YDR392W YDL176WQ12027 708 aa7.6□□□□□ -1.19
SPT3YDR392W YJU3P28321 313 aa7.59□□□□□ -1.19
SPT3YDR392W RSC30P38781 883 aa7.59□□□□□ -1.19
SPT3YDR392W TYW1Q08960 810 aaKnown RBP7.59□□□□□ -1.19
SPT3YDR392W VAC17P25591 423 aa7.58□□□□□ -1.2
SPT3YDR392W NUP85P46673 744 aa7.58□□□□□ -1.2
SPT3YDR392W ATG20Q07528 640 aa7.58□□□□□ -1.2
SPT3YDR392W TOP1P04786 769 aa7.57□□□□□ -1.2
SPT3YDR392W BSD2P38356 321 aa7.56□□□□□ -1.2
SPT3YDR392W OPT2Q06593 877 aa7.56□□□□□ -1.2
SPT3YDR392W ACO2P39533 789 aa7.55□□□□□ -1.2
SPT3YDR392W CSN12P47130 423 aa7.55□□□□□ -1.2
SPT3YDR392W RIM15P43565 1770 aa7.55□□□□□ -1.2
SPT3YDR392W FAB1P34756 2278 aa7.55□□□□□ -1.2
SPT3YDR392W ENP1P38333 483 aaKnown RBP7.54□□□□□ -1.2
SPT3YDR392W PKH3Q03306 898 aaPredicted RBP7.54□□□□□ -1.2
SPT3YDR392W FAS2P19097 1887 aaKnown RBP7.53□□□□□ -1.2
SPT3YDR392W FIG2P25653 1609 aa7.53□□□□□ -1.2
SPT3YDR392W ARG8P18544 423 aa7.53□□□□□ -1.2
SPT3YDR392W YLL066CQ99208 1374 aa7.53□□□□□ -1.2
SPT3YDR392W ARG82P07250 355 aa7.52□□□□□ -1.21
SPT3YDR392W KTR1P27810 393 aaKnown RBP7.52□□□□□ -1.21
SPT3YDR392W GLY1P37303 387 aaKnown RBP7.52□□□□□ -1.21
SPT3YDR392W CAF120P53836 1060 aa7.51□□□□□ -1.21
SPT3YDR392W CAB1Q04430 367 aa7.51□□□□□ -1.21
SPT3YDR392W HVG1P0CE11 249 aa7.5□□□□□ -1.21
SPT3YDR392W MIP1P15801 1254 aa7.5□□□□□ -1.21
SPT3YDR392W ATG13Q06628 738 aa7.5□□□□□ -1.21
SPT3YDR392W CHZ1P40019 153 aaPredicted RBP7.49□□□□□ -1.21
SPT3YDR392W PEA2P40091 420 aa7.48□□□□□ -1.21
SPT3YDR392W EMW1P42842 904 aaKnown RBP7.48□□□□□ -1.21
SPT3YDR392W SCW11P53189 542 aa7.48□□□□□ -1.21
SPT3YDR392W LSC2P53312 427 aa7.48□□□□□ -1.21
SPT3YDR392W SHC1P39000 512 aa7.47□□□□□ -1.21
SPT3YDR392W AAD14P42884 376 aa7.47□□□□□ -1.21
SPT3YDR392W YNR014WP53719 212 aa7.47□□□□□ -1.21
SPT3YDR392W UBP2Q01476 1272 aa7.47□□□□□ -1.21
SPT3YDR392W RIX7Q07844 837 aaKnown RBP7.46□□□□□ -1.22
SPT3YDR392W RAD4P14736 754 aa7.45□□□□□ -1.22
SPT3YDR392W CPS1P27614 576 aa7.45□□□□□ -1.22
SPT3YDR392W TY1A-BLQ12266 440 aa7.45□□□□□ -1.22
SPT3YDR392W GCN1P33892 2672 aaKnown RBP7.44□□□□□ -1.22
SPT3YDR392W MOT2P34909 587 aaKnown RBP7.44□□□□□ -1.22
SPT3YDR392W FIG4P42837 879 aa7.44□□□□□ -1.22
SPT3YDR392W SLM3Q12093 417 aa7.44□□□□□ -1.22
SPT3YDR392W RAD59Q12223 238 aa7.44□□□□□ -1.22
SPT3YDR392W PAH1P32567 862 aa7.42□□□□□ -1.22
SPT3YDR392W CWC15Q03772 175 aaKnown RBP7.41□□□□□ -1.22
SPT3YDR392W YIR007WP40566 764 aa7.4□□□□□ -1.22
Retrieved 100 of 5,963 RNA–protein pairs in 26 ms