RNA–Protein interactions for RNA: YDL229W

SSB1, Transcript of Cytoplasmic ATPase that is a ribosome-associated molecular chaperone, yeastyeast

Gene SSB1, Length 1,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSB1YDL229W PPX1P38698 397 aa4.86□□□□□ -1.63
SSB1YDL229W RTC4P53850 401 aa4.86□□□□□ -1.63
SSB1YDL229W MDM1Q01846 1127 aa4.86□□□□□ -1.63
SSB1YDL229W PNG1Q02890 363 aa4.86□□□□□ -1.63
SSB1YDL229W MPC54Q08550 464 aa4.86□□□□□ -1.63
SSB1YDL229W STU1P38198 1513 aa4.86□□□□□ -1.63
SSB1YDL229W RKR1Q04781 1562 aa4.86□□□□□ -1.63
SSB1YDL229W TY2B-LR1P0C2J3 1770 aa4.86□□□□□ -1.63
SSB1YDL229W TY2B-FP0CX63 1770 aa4.86□□□□□ -1.63
SSB1YDL229W TY2B-GR2P0CX64 1770 aa4.86□□□□□ -1.63
SSB1YDL229W TY2B-CP25384 1770 aa4.86□□□□□ -1.63
SSB1YDL229W TY2B-DR2Q03494 1770 aa4.86□□□□□ -1.63
SSB1YDL229W TY1B-DR1Q03855 1755 aa4.86□□□□□ -1.63
SSB1YDL229W TY2B-DR3Q07791 1770 aaKnown RBP4.86□□□□□ -1.63
SSB1YDL229W TY2B-OR1Q12113 1770 aa4.86□□□□□ -1.63
SSB1YDL229W TY2B-DR1Q12472 1770 aa4.86□□□□□ -1.63
SSB1YDL229W TY2B-OR2Q12501 1770 aa4.86□□□□□ -1.63
SSB1YDL229W PCT1P13259 424 aa4.86□□□□□ -1.63
SSB1YDL229W SEC15P22224 910 aa4.86□□□□□ -1.63
SSB1YDL229W CDC3P32457 520 aaKnown RBP4.86□□□□□ -1.63
SSB1YDL229W HIR2P32480 875 aa4.86□□□□□ -1.63
SSB1YDL229W IES1P43579 692 aa4.86□□□□□ -1.63
SSB1YDL229W UBX2Q04228 584 aa4.86□□□□□ -1.63
SSB1YDL229W ARV1Q06541 321 aa4.86□□□□□ -1.63
SSB1YDL229W NUP145P49687 1317 aa4.85□□□□□ -1.63
SSB1YDL229W SPP41P38904 1435 aa4.85□□□□□ -1.63
SSB1YDL229W ARL1P38116 183 aaKnown RBP4.85□□□□□ -1.63
SSB1YDL229W TCD1P38756 429 aa4.85□□□□□ -1.63
SSB1YDL229W SSZ1P38788 538 aaKnown RBP4.85□□□□□ -1.63
SSB1YDL229W GGA2P38817 585 aaKnown RBP4.85□□□□□ -1.63
SSB1YDL229W MEF2P39677 819 aa4.85□□□□□ -1.63
SSB1YDL229W MET10P39692 1035 aa4.85□□□□□ -1.63
SSB1YDL229W PEX21P50091 288 aa4.85□□□□□ -1.63
SSB1YDL229W MSN5P52918 1224 aa4.85□□□□□ -1.63
SSB1YDL229W CWH41P53008 833 aa4.85□□□□□ -1.63
SSB1YDL229W VTI1Q04338 217 aa4.85□□□□□ -1.63
SSB1YDL229W YMR111CQ04461 462 aaPredicted RBP4.85□□□□□ -1.63
SSB1YDL229W SML1Q04964 104 aa4.85□□□□□ -1.63
SSB1YDL229W COG4Q06096 861 aa4.85□□□□□ -1.63
SSB1YDL229W CSR1Q06705 408 aaKnown RBP4.85□□□□□ -1.63
SSB1YDL229W PET494P07390 489 aaPredicted RBP4.84□□□□□ -1.63
SSB1YDL229W PET123P17558 318 aa4.84□□□□□ -1.63
SSB1YDL229W PHO84P25297 587 aaKnown RBP4.84□□□□□ -1.63
SSB1YDL229W MRE11P32829 692 aa4.84□□□□□ -1.63
SSB1YDL229W NIP100P33420 868 aa4.84□□□□□ -1.63
SSB1YDL229W STN1P38960 494 aa4.84□□□□□ -1.63
SSB1YDL229W ITT1Q04638 464 aa4.84□□□□□ -1.63
SSB1YDL229W YIL002W-AQ3E7Z5 69 aa4.84□□□□□ -1.63
SSB1YDL229W YOR1P53049 1477 aa4.84□□□□□ -1.64
SSB1YDL229W SEC14P24280 304 aaKnown RBP4.83□□□□□ -1.64
SSB1YDL229W RRP1P35178 278 aaPredicted RBP4.83□□□□□ -1.64
SSB1YDL229W MET1P36150 593 aa4.83□□□□□ -1.64
SSB1YDL229W APD1P38281 316 aa4.83□□□□□ -1.64
SSB1YDL229W ETP1P38748 585 aaKnown RBP4.83□□□□□ -1.64
SSB1YDL229W SAP1P39955 897 aaKnown RBP4.83□□□□□ -1.64
SSB1YDL229W YER034WP40022 185 aaKnown RBP4.83□□□□□ -1.64
SSB1YDL229W BUD27P43573 796 aaKnown RBP RIP-Chip data4.83□□□□□ -1.64not detected
SSB1YDL229W ESF2P53743 316 aaKnown RBP4.83□□□□□ -1.64
SSB1YDL229W MRS2Q01926 470 aa4.83□□□□□ -1.64
SSB1YDL229W SVL3Q03088 825 aaKnown RBP4.83□□□□□ -1.64
SSB1YDL229W ERB1Q04660 807 aaKnown RBP4.83□□□□□ -1.64
SSB1YDL229W ENT2Q05785 613 aa4.83□□□□□ -1.64
SSB1YDL229W YIG1Q08956 461 aa4.83□□□□□ -1.64
SSB1YDL229W MRPL25P23369 157 aa4.83□□□□□ -1.64
SSB1YDL229W CDC48P25694 835 aaKnown RBP4.83□□□□□ -1.64
SSB1YDL229W PAP1P29468 568 aaKnown RBP4.83□□□□□ -1.64
SSB1YDL229W SWC3P31376 625 aa4.83□□□□□ -1.64
SSB1YDL229W RTG2P32608 588 aaKnown RBP4.83□□□□□ -1.64
SSB1YDL229W CSE1P33307 960 aa4.83□□□□□ -1.64
SSB1YDL229W PTH2P34222 208 aa4.83□□□□□ -1.64
SSB1YDL229W SWD1P39706 426 aa4.83□□□□□ -1.64
SSB1YDL229W MET18P40469 1032 aa4.83□□□□□ -1.64
SSB1YDL229W YFR006WP43590 535 aa4.83□□□□□ -1.64
SSB1YDL229W YAF9P53930 226 aa4.83□□□□□ -1.64
SSB1YDL229W HOS3Q02959 697 aaKnown RBP4.83□□□□□ -1.64
SSB1YDL229W SNZ1Q03148 297 aa4.83□□□□□ -1.64
SSB1YDL229W KRE28Q04431 385 aa4.83□□□□□ -1.64
SSB1YDL229W IRC3Q06683 689 aa4.83□□□□□ -1.64
SSB1YDL229W MMS22Q06164 1454 aa4.83□□□□□ -1.64
SSB1YDL229W LEU1P07264 779 aaKnown RBP4.82□□□□□ -1.64
SSB1YDL229W TPM1P17536 199 aaKnown RBP4.82□□□□□ -1.64
SSB1YDL229W GDT1P38301 280 aaPredicted RBP4.82□□□□□ -1.64
SSB1YDL229W PET100P38958 111 aa4.82□□□□□ -1.64
SSB1YDL229W HOT1Q03213 719 aa4.82□□□□□ -1.64
SSB1YDL229W DNL4Q08387 944 aaPredicted RBP4.82□□□□□ -1.64
SSB1YDL229W SSK22P25390 1331 aaPredicted RBP4.82□□□□□ -1.64
SSB1YDL229W IKI3Q06706 1349 aaKnown RBP4.82□□□□□ -1.64
SSB1YDL229W TY1B-DR3Q99231 1755 aa4.82□□□□□ -1.64
SSB1YDL229W VMA1P17255 1071 aaKnown RBP4.81□□□□□ -1.64
SSB1YDL229W APN1P22936 367 aa4.81□□□□□ -1.64
SSB1YDL229W SMY2P32909 740 aaKnown RBP4.81□□□□□ -1.64
SSB1YDL229W VPS35P34110 944 aa4.81□□□□□ -1.64
SSB1YDL229W RTT107P38850 1070 aa4.81□□□□□ -1.64
SSB1YDL229W UTP18P40362 594 aaPredicted RBP4.81□□□□□ -1.64
SSB1YDL229W RIC1P40395 1056 aa4.81□□□□□ -1.64
SSB1YDL229W MAD1P40957 749 aa4.81□□□□□ -1.64
SSB1YDL229W LAM5P43560 674 aa4.81□□□□□ -1.64
SSB1YDL229W ALD4P46367 519 aaKnown RBP4.81□□□□□ -1.64
SSB1YDL229W ARP5P53946 755 aa4.81□□□□□ -1.64
SSB1YDL229W AAD16Q02895 342 aa4.81□□□□□ -1.64
Retrieved 100 of 5,963 RNA–protein pairs in 8.5 ms