RNA–Protein interactions for RNA: YBR200W

BEM1, Transcript of Protein containing SH3-domains, yeastyeast

Gene BEM1, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BEM1YBR200W PXR1P53335 271 aaPredicted RBP8.64□□□□□ -1.03
BEM1YBR200W YNL050CP53952 270 aa8.64□□□□□ -1.03
BEM1YBR200W TCB1Q12466 1186 aa8.64□□□□□ -1.03
BEM1YBR200W TY1B-AO13527 1196 aaKnown RBP8.63□□□□□ -1.03
BEM1YBR200W SWH1P35845 1188 aa8.63□□□□□ -1.03
BEM1YBR200W YNG2P38806 282 aaKnown RBP8.63□□□□□ -1.03
BEM1YBR200W CCT5P40413 562 aaKnown RBP8.63□□□□□ -1.03
BEM1YBR200W UBP10P53874 792 aaPredicted RBP8.63□□□□□ -1.03
BEM1YBR200W YOR389WQ08912 624 aa8.63□□□□□ -1.03
BEM1YBR200W MSB4Q12317 492 aa8.63□□□□□ -1.03
BEM1YBR200W SUP35P05453 685 aaKnown RBP8.62□□□□□ -1.03
BEM1YBR200W RAD3P06839 778 aa8.62□□□□□ -1.03
BEM1YBR200W MCM1P11746 286 aa8.62□□□□□ -1.03
BEM1YBR200W HOS4P40480 1083 aa8.62□□□□□ -1.03
BEM1YBR200W LEM3P42838 414 aa8.62□□□□□ -1.03
BEM1YBR200W SPO1P53541 631 aa8.62□□□□□ -1.03
BEM1YBR200W TAP42Q04372 366 aa8.62□□□□□ -1.03
BEM1YBR200W RSF2P46974 1380 aa8.62□□□□□ -1.03
BEM1YBR200W ZUO1P32527 433 aaKnown RBP8.62□□□□□ -1.03
BEM1YBR200W NPR3P38742 1146 aa8.62□□□□□ -1.03
BEM1YBR200W JSN1P47135 1091 aaKnown RBP RIP-Chip data8.62□□□□□ -1.03not detected
BEM1YBR200W YKL068W-AQ3E826 78 aa8.62□□□□□ -1.03
BEM1YBR200W TY4B-PA0A0B7P3V8 1104 aa8.61□□□□□ -1.03
BEM1YBR200W TRL1P09880 827 aaKnown RBP8.61□□□□□ -1.03
BEM1YBR200W PSE1P32337 1089 aaKnown RBP8.61□□□□□ -1.03
BEM1YBR200W RIM101P33400 625 aa8.61□□□□□ -1.03
BEM1YBR200W RRD1P40454 393 aaKnown RBP8.61□□□□□ -1.03
BEM1YBR200W YGL082WP53155 381 aa8.61□□□□□ -1.03
BEM1YBR200W ORM2Q06144 216 aa8.61□□□□□ -1.03
BEM1YBR200W NDL1Q06568 189 aa8.61□□□□□ -1.03
BEM1YBR200W MDM38Q08179 573 aa8.61□□□□□ -1.03
BEM1YBR200W SLM3Q12093 417 aa8.61□□□□□ -1.03
BEM1YBR200W NFI1Q12216 726 aa8.61□□□□□ -1.03
BEM1YBR200W COBP00163 385 aa8.6□□□□□ -1.03
BEM1YBR200W ATE1P16639 503 aa8.6□□□□□ -1.03
BEM1YBR200W HSP104P31539 908 aaKnown RBP8.6□□□□□ -1.03
BEM1YBR200W ELM1P32801 640 aa8.6□□□□□ -1.03
BEM1YBR200W AIM20P40451 204 aa8.6□□□□□ -1.03
BEM1YBR200W GGA1Q06336 557 aa8.6□□□□□ -1.03
BEM1YBR200W HIM1Q06674 414 aa8.6□□□□□ -1.03
BEM1YBR200W SEC39Q12745 709 aa8.6□□□□□ -1.03
BEM1YBR200W VAS1P07806 1104 aaKnown RBP8.59□□□□□ -1.03
BEM1YBR200W BRL1P38770 471 aa8.59□□□□□ -1.03
BEM1YBR200W LAM6Q08001 693 aa8.59□□□□□ -1.03
BEM1YBR200W PUS1Q12211 544 aaKnown RBP8.59□□□□□ -1.03
BEM1YBR200W DUR1,2P32528 1835 aaKnown RBP8.59□□□□□ -1.03
BEM1YBR200W PDI1P17967 522 aaKnown RBP8.59□□□□□ -1.03
BEM1YBR200W YKR075CP36155 307 aa8.59□□□□□ -1.03
BEM1YBR200W ISW1P38144 1129 aa8.59□□□□□ -1.03
BEM1YBR200W DMA1P38823 416 aa8.59□□□□□ -1.03
BEM1YBR200W SEC9P40357 651 aa8.59□□□□□ -1.03
BEM1YBR200W MVP1P40959 511 aaKnown RBP8.59□□□□□ -1.03
BEM1YBR200W COG4Q06096 861 aa8.59□□□□□ -1.03
BEM1YBR200W TRS33Q99394 268 aa8.59□□□□□ -1.03
BEM1YBR200W PSO2P30620 661 aa8.58□□□□□ -1.04
BEM1YBR200W PRP40P33203 583 aaKnown RBP8.58□□□□□ -1.04
BEM1YBR200W YKL133CP36066 463 aa8.58□□□□□ -1.04
BEM1YBR200W ARP5P53946 755 aa8.58□□□□□ -1.04
BEM1YBR200W CSI1Q04368 295 aa8.58□□□□□ -1.04
BEM1YBR200W SGD1Q06132 899 aa8.58□□□□□ -1.04
BEM1YBR200W CFT2Q12102 859 aaPredicted RBP8.58□□□□□ -1.04
BEM1YBR200W GYP7P48365 746 aa8.57□□□□□ -1.04
BEM1YBR200W PEX14P53112 341 aa8.57□□□□□ -1.04
BEM1YBR200W CDC16P09798 840 aa8.56□□□□□ -1.04
BEM1YBR200W RPL19AP0CX82 189 aaKnown RBP8.56□□□□□ -1.04
BEM1YBR200W RPL19BP0CX83 189 aaPredicted RBP8.56□□□□□ -1.04
BEM1YBR200W FRS2P15625 503 aaKnown RBP8.56□□□□□ -1.04
BEM1YBR200W CLN1P20437 546 aa8.56□□□□□ -1.04
BEM1YBR200W TTI1P36097 1038 aa8.56□□□□□ -1.04
BEM1YBR200W YKR023WP36119 530 aaKnown RBP8.56□□□□□ -1.04
BEM1YBR200W BDP1P46678 594 aa8.56□□□□□ -1.04
BEM1YBR200W YIL177CP40434 1758 aa8.56□□□□□ -1.04
BEM1YBR200W YJL225CP40889 1758 aa8.56□□□□□ -1.04
BEM1YBR200W SLD2P34252 453 aa8.56□□□□□ -1.04
BEM1YBR200W NDC80P40460 691 aa8.56□□□□□ -1.04
BEM1YBR200W IAH1P41734 238 aa8.56□□□□□ -1.04
BEM1YBR200W GYL1Q04322 720 aa8.56□□□□□ -1.04
BEM1YBR200W SPT5P27692 1063 aaKnown RBP8.55□□□□□ -1.04
BEM1YBR200W PRX1P34227 261 aaKnown RBP8.55□□□□□ -1.04
BEM1YBR200W YMR1P47147 688 aaKnown RBP RIP-Chip data8.55□□□□□ -1.04not detected
BEM1YBR200W RPS24AP0CX31 135 aaKnown RBP8.54□□□□□ -1.04
BEM1YBR200W RPS24BP0CX32 135 aaKnown RBP8.54□□□□□ -1.04
BEM1YBR200W GRX4P32642 244 aa8.54□□□□□ -1.04
BEM1YBR200W RIO2P40160 425 aaKnown RBP8.54□□□□□ -1.04
BEM1YBR200W YPL225WQ08971 146 aaKnown RBP8.54□□□□□ -1.04
BEM1YBR200W MRPL32P25348 183 aa8.53□□□□□ -1.04
BEM1YBR200W PUP2P32379 260 aa8.53□□□□□ -1.04
BEM1YBR200W XKS1P42826 600 aa8.53□□□□□ -1.04
BEM1YBR200W RTF1P53064 558 aa8.53□□□□□ -1.04
BEM1YBR200W SRT1Q03175 343 aa8.53□□□□□ -1.04
BEM1YBR200W SRC1Q03707 834 aa8.53□□□□□ -1.04
BEM1YBR200W ARR1Q06596 294 aa8.53□□□□□ -1.04
BEM1YBR200W RPS19AP07280 144 aaKnown RBP8.53□□□□□ -1.04
BEM1YBR200W RPS19BP07281 144 aaPredicted RBP8.53□□□□□ -1.04
BEM1YBR200W PET123P17558 318 aa8.53□□□□□ -1.04
BEM1YBR200W OSW7P43611 510 aa8.53□□□□□ -1.04
BEM1YBR200W RCF1Q03713 159 aa8.53□□□□□ -1.04
BEM1YBR200W GLE1Q12315 538 aa8.53□□□□□ -1.04
BEM1YBR200W TFG1P41895 735 aaPredicted RBP8.52□□□□□ -1.05
BEM1YBR200W MTR4P47047 1073 aaKnown RBP8.52□□□□□ -1.05
Retrieved 100 of 5,963 RNA–protein pairs in 43 ms