RNA–Protein interactions for RNA: ENST00000592097.5

NEDD4L-234, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4L, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-234ENST00000592097 RGS17Q9UGC6 210 aaPredicted RBP11.77□□□□□ -0.53
NEDD4L-234ENST00000592097 PZPP20742 1482 aa11.76□□□□□ -0.53
NEDD4L-234ENST00000592097 ROBO1Q9Y6N7 1651 aa11.76□□□□□ -0.53
NEDD4L-234ENST00000592097 NLRP1Q9C000 1473 aa11.76□□□□□ -0.53
NEDD4L-234ENST00000592097 PLPP6Q8IY26 295 aa11.75□□□□□ -0.53
NEDD4L-234ENST00000592097 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.75□□□□□ -0.53
NEDD4L-234ENST00000592097 TNRQ92752 1358 aa11.75□□□□□ -0.53
NEDD4L-234ENST00000592097 PLEKHH2Q8IVE3 1493 aa11.73□□□□□ -0.53
NEDD4L-234ENST00000592097 ARHGAP35Q9NRY4 1499 aa11.72□□□□□ -0.53
NEDD4L-234ENST00000592097 SPAG9O60271 1321 aaKnown RBP11.72□□□□□ -0.53
NEDD4L-234ENST00000592097 PHLPP1O60346 1717 aa11.72□□□□□ -0.53
NEDD4L-234ENST00000592097 POTEB2H3BUK9 544 aa11.71□□□□□ -0.53
NEDD4L-234ENST00000592097 POTEJP0CG39 1038 aa11.71□□□□□ -0.53
NEDD4L-234ENST00000592097 UBR1Q8IWV7 1749 aa11.71□□□□□ -0.54
NEDD4L-234ENST00000592097 LRRC9Q6ZRR7 1453 aa11.7□□□□□ -0.54
NEDD4L-234ENST00000592097 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.7□□□□□ -0.54
NEDD4L-234ENST00000592097 POTEAQ6S8J7 498 aa11.7□□□□□ -0.54
NEDD4L-234ENST00000592097 EMILIN3Q9NT22 766 aa11.7□□□□□ -0.54
NEDD4L-234ENST00000592097 ATP1B4Q9UN42 357 aaPredicted RBP11.69□□□□□ -0.54
NEDD4L-234ENST00000592097 KIAA1107Q9UPP5 1409 aa11.68□□□□□ -0.54
NEDD4L-234ENST00000592097 MAMSTRQ6ZN01 415 aa11.67□□□□□ -0.54
NEDD4L-234ENST00000592097 ANKLE2Q86XL3 938 aa11.67□□□□□ -0.54
NEDD4L-234ENST00000592097 GGT6Q6P531 493 aa11.66□□□□□ -0.54
NEDD4L-234ENST00000592097 FAM135BQ49AJ0 1406 aa11.65□□□□□ -0.54
NEDD4L-234ENST00000592097 TIAM1Q13009 1591 aa11.65□□□□□ -0.54
NEDD4L-234ENST00000592097 MAP3K1Q13233 1512 aa11.65□□□□□ -0.55
NEDD4L-234ENST00000592097 GPATCH8Q9UKJ3 1502 aaKnown RBP11.65□□□□□ -0.55
NEDD4L-234ENST00000592097 SHPRHQ149N8 1683 aa11.65□□□□□ -0.55
NEDD4L-234ENST00000592097 COL16A1Q07092 1604 aaPredicted RBP11.64□□□□□ -0.55
NEDD4L-234ENST00000592097 SCAF11Q99590 1463 aaKnown RBP11.64□□□□□ -0.55
NEDD4L-234ENST00000592097 SLC34A2O95436 690 aa11.64□□□□□ -0.55
NEDD4L-234ENST00000592097 SCUBE2Q9NQ36 999 aa11.64□□□□□ -0.55
NEDD4L-234ENST00000592097 FYCO1Q9BQS8 1478 aa11.63□□□□□ -0.55
NEDD4L-234ENST00000592097 SPDYE16A6NNV3 312 aaPredicted RBP11.63□□□□□ -0.55
NEDD4L-234ENST00000592097 PDIA6Q15084 440 aa11.63□□□□□ -0.55
NEDD4L-234ENST00000592097 OXER1Q8TDS5 423 aa11.63□□□□□ -0.55
NEDD4L-234ENST00000592097 CEP152O94986 1710 aa11.63□□□□□ -0.55
NEDD4L-234ENST00000592097 SRCAPQ6ZRS2 3230 aa11.62□□□□□ -0.55
NEDD4L-234ENST00000592097 TESPA1A2RU30 521 aaPredicted RBP11.62□□□□□ -0.55
NEDD4L-234ENST00000592097 DPYSL4O14531 572 aa11.62□□□□□ -0.55
NEDD4L-234ENST00000592097 THEMISQ8N1K5 641 aaPredicted RBP11.62□□□□□ -0.55
NEDD4L-234ENST00000592097 NWD1Q149M9 1564 aa11.62□□□□□ -0.55
NEDD4L-234ENST00000592097 CASKIN1Q8WXD9 1431 aa11.61□□□□□ -0.55
NEDD4L-234ENST00000592097 MIA2Q96PC5 1412 aa11.61□□□□□ -0.55
NEDD4L-234ENST00000592097 SEMA3EO15041 775 aa11.61□□□□□ -0.55
NEDD4L-234ENST00000592097 PTCD2Q8WV60 388 aaKnown RBP11.61□□□□□ -0.55
NEDD4L-234ENST00000592097 SLIT1O75093 1534 aa11.6□□□□□ -0.55
NEDD4L-234ENST00000592097 EIF2AK4Q9P2K8 1649 aaKnown RBP11.6□□□□□ -0.55
NEDD4L-234ENST00000592097 CDK12Q9NYV4 1490 aaPredicted RBP11.6□□□□□ -0.55
NEDD4L-234ENST00000592097 ZNF777Q9ULD5 760 aaPredicted RBP11.6□□□□□ -0.55
NEDD4L-234ENST00000592097 RTEL1-TNFRSF6BF6WH68 1400 aa11.6□□□□□ -0.55
NEDD4L-234ENST00000592097 ERVK-7P63135 1459 aa11.59□□□□□ -0.55
NEDD4L-234ENST00000592097 UPF1Q92900 1129 aaKnown RBP eCLIP11.59□□□□□ -0.55
NEDD4L-234ENST00000592097 LRP6O75581 1613 aa11.59□□□□□ -0.55
NEDD4L-234ENST00000592097 ABCC3O15438 1527 aa11.59□□□□□ -0.55
NEDD4L-234ENST00000592097 KDM5AP29375 1690 aaKnown RBP11.59□□□□□ -0.55
NEDD4L-234ENST00000592097 NKTRP30414 1462 aaKnown RBP11.58□□□□□ -0.56
NEDD4L-234ENST00000592097 MAP3K9P80192 1104 aa11.58□□□□□ -0.56
NEDD4L-234ENST00000592097 CAMSAP2Q08AD1 1489 aa11.57□□□□□ -0.56
NEDD4L-234ENST00000592097 ARHGAP23Q9P227 1491 aa11.57□□□□□ -0.56
NEDD4L-234ENST00000592097 JCADQ9P266 1359 aa11.57□□□□□ -0.56
NEDD4L-234ENST00000592097 TULP1O00294 542 aaPredicted RBP11.57□□□□□ -0.56
NEDD4L-234ENST00000592097 FBXO31Q5XUX0 539 aaPredicted RBP11.57□□□□□ -0.56
NEDD4L-234ENST00000592097 SLAIN1Q8ND83 568 aa11.57□□□□□ -0.56
NEDD4L-234ENST00000592097 HNRNPMP52272 730 aaKnown RBP eCLIP11.56□□□□□ -0.56
NEDD4L-234ENST00000592097 CCDC141Q6ZP82 1450 aa11.56□□□□□ -0.56
NEDD4L-234ENST00000592097 DHX29Q7Z478 1369 aaKnown RBP11.55□□□□□ -0.56
NEDD4L-234ENST00000592097 TBC1D12O60347 775 aa11.55□□□□□ -0.56
NEDD4L-234ENST00000592097 SMYD5Q6GMV2 418 aa11.55□□□□□ -0.56
NEDD4L-234ENST00000592097 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.55□□□□□ -0.56
NEDD4L-234ENST00000592097 OTUD5Q96G74 571 aa11.55□□□□□ -0.56
NEDD4L-234ENST00000592097 PIK3C2BO00750 1634 aa11.55□□□□□ -0.56
NEDD4L-234ENST00000592097 MROH1Q8NDA8 1641 aa11.55□□□□□ -0.56
NEDD4L-234ENST00000592097 PRDM15P57071 1507 aaPredicted RBP11.55□□□□□ -0.56
NEDD4L-234ENST00000592097 EHBP1L1Q8N3D4 1523 aa11.55□□□□□ -0.56
NEDD4L-234ENST00000592097 FGD6Q6ZV73 1430 aa11.54□□□□□ -0.56
NEDD4L-234ENST00000592097 AHDC1Q5TGY3 1603 aaPredicted RBP11.54□□□□□ -0.56
NEDD4L-234ENST00000592097 MBD5Q9P267 1494 aa11.54□□□□□ -0.56
NEDD4L-234ENST00000592097 TMEM94Q12767 1356 aa11.54□□□□□ -0.56
NEDD4L-234ENST00000592097 CCNB3Q8WWL7 1395 aa11.54□□□□□ -0.56
NEDD4L-234ENST00000592097 NCOA2Q15596 1464 aa11.53□□□□□ -0.56
NEDD4L-234ENST00000592097 CFAP65Q6ZU64 1925 aaKnown RBP11.52□□□□□ -0.56
NEDD4L-234ENST00000592097 TRIM52Q96A61 297 aa11.52□□□□□ -0.57
NEDD4L-234ENST00000592097 WASHC2CQ9Y4E1 1318 aa11.52□□□□□ -0.57
NEDD4L-234ENST00000592097 ARHGEF5Q12774 1597 aa11.51□□□□□ -0.57
NEDD4L-234ENST00000592097 PTGER2P43116 358 aa11.51□□□□□ -0.57
NEDD4L-234ENST00000592097 DOK7Q18PE1 504 aa11.51□□□□□ -0.57
NEDD4L-234ENST00000592097 ZNF772Q68DY9 489 aaPredicted RBP11.51□□□□□ -0.57
NEDD4L-234ENST00000592097 LMOD2Q6P5Q4 547 aa11.51□□□□□ -0.57
NEDD4L-234ENST00000592097 CFDP1Q9UEE9 299 aaPredicted RBP11.51□□□□□ -0.57
NEDD4L-234ENST00000592097 KIF3BO15066 747 aa11.5□□□□□ -0.57
NEDD4L-234ENST00000592097 SPATA31A6Q5VVP1 1343 aa11.5□□□□□ -0.57
NEDD4L-234ENST00000592097 RGS12O14924 1447 aa11.5□□□□□ -0.57
NEDD4L-234ENST00000592097 DIP2AQ14689 1571 aa11.5□□□□□ -0.57
NEDD4L-234ENST00000592097 EVI5O60447 810 aa11.49□□□□□ -0.57
NEDD4L-234ENST00000592097 HOXB3P14651 431 aaPredicted RBP11.49□□□□□ -0.57
NEDD4L-234ENST00000592097 MLLT3P42568 568 aaPredicted RBP11.49□□□□□ -0.57
NEDD4L-234ENST00000592097 TPRNQ4KMQ1 711 aa11.49□□□□□ -0.57
NEDD4L-234ENST00000592097 MEX3CQ5U5Q3 659 aaKnown RBP11.49□□□□□ -0.57
NEDD4L-234ENST00000592097 PCDHGA4Q9Y5G9 962 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms