RNA–Protein interactions for RNA: ENST00000592097.5

NEDD4L-234, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4L, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-234ENST00000592097 AEBP2Q6ZN18 517 aaPredicted RBP24.79■■□□□ 1.56
NEDD4L-234ENST00000592097 CHIC1Q5VXU3 224 aa24.49■■□□□ 1.51
NEDD4L-234ENST00000592097 PHF23Q9BUL5 403 aaPredicted RBP21.54■■□□□ 1.04
NEDD4L-234ENST00000592097 SENP3Q9H4L4 574 aaPredicted RBP21.04■□□□□ 0.96
NEDD4L-234ENST00000592097 PLPPR3Q6T4P5 718 aa20■□□□□ 0.79
NEDD4L-234ENST00000592097 FOXD1Q16676 465 aa19.46■□□□□ 0.71
NEDD4L-234ENST00000592097 PPP6R1Q9UPN7 881 aa18.89■□□□□ 0.61
NEDD4L-234ENST00000592097 ADRA2BP18089 450 aa18.87■□□□□ 0.61
NEDD4L-234ENST00000592097 PIAS4Q8N2W9 510 aaPredicted RBP18.4■□□□□ 0.54
NEDD4L-234ENST00000592097 NISCHQ9Y2I1 1504 aa18.35■□□□□ 0.53
NEDD4L-234ENST00000592097 MSH5O43196 834 aa17.9■□□□□ 0.46
NEDD4L-234ENST00000592097 PPP4R3CPQ6ZMV5 832 aa17.63■□□□□ 0.41
NEDD4L-234ENST00000592097 KCNA4P22459 653 aa17.46■□□□□ 0.39
NEDD4L-234ENST00000592097 SCAF1Q9H7N4 1312 aaKnown RBP17.34■□□□□ 0.37
NEDD4L-234ENST00000592097 ABCC9O60706 1549 aa17.26■□□□□ 0.35
NEDD4L-234ENST00000592097 NCBP3Q53F19 620 aaKnown RBP17.26■□□□□ 0.35
NEDD4L-234ENST00000592097 CNKSR2Q8WXI2 1034 aa17.11■□□□□ 0.33
NEDD4L-234ENST00000592097 MAPK8IP2Q13387 824 aaPredicted RBP17.03■□□□□ 0.32
NEDD4L-234ENST00000592097 POTEDQ86YR6 584 aa17.02■□□□□ 0.32
NEDD4L-234ENST00000592097 NPM3O75607 178 aaKnown RBP16.99■□□□□ 0.31
NEDD4L-234ENST00000592097 CCDC180Q9P1Z9 1646 aa16.97■□□□□ 0.31
NEDD4L-234ENST00000592097 DMRT2Q9Y5R5 561 aa16.85■□□□□ 0.29
NEDD4L-234ENST00000592097 RNF216Q9NWF9 866 aaPredicted RBP16.73■□□□□ 0.27
NEDD4L-234ENST00000592097 SLC4A1APQ9BWU0 796 aaKnown RBP16.69■□□□□ 0.26
NEDD4L-234ENST00000592097 HOXD11P31277 338 aaPredicted RBP16.61■□□□□ 0.25
NEDD4L-234ENST00000592097 DNAJC5BQ9UF47 199 aa16.6■□□□□ 0.25
NEDD4L-234ENST00000592097 EHMT2Q96KQ7 1210 aa16.41■□□□□ 0.22
NEDD4L-234ENST00000592097 RB1CC1Q8TDY2 1594 aa16.32■□□□□ 0.2
NEDD4L-234ENST00000592097 CSRNP3Q8WYN3 585 aa16.19■□□□□ 0.18
NEDD4L-234ENST00000592097 ZBTB22O15209 634 aa16.08■□□□□ 0.16
NEDD4L-234ENST00000592097 UNC13AQ9UPW8 1703 aa16.07■□□□□ 0.16
NEDD4L-234ENST00000592097 FOXD4L1Q9NU39 408 aa16.05■□□□□ 0.16
NEDD4L-234ENST00000592097 NACADO15069 1562 aa16.03■□□□□ 0.16
NEDD4L-234ENST00000592097 SLC4A2P04920 1241 aa15.98■□□□□ 0.15
NEDD4L-234ENST00000592097 DCAF8L1A6NGE4 600 aa15.97■□□□□ 0.15
NEDD4L-234ENST00000592097 BICRAQ9NZM4 1560 aa15.82■□□□□ 0.12
NEDD4L-234ENST00000592097 PABPN1Q86U42 306 aaKnown RBP eCLIP15.79■□□□□ 0.12
NEDD4L-234ENST00000592097 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.75■□□□□ 0.116e-7■□□□□ 11.2
NEDD4L-234ENST00000592097 MYCNP04198 464 aaPredicted RBP15.72■□□□□ 0.11
NEDD4L-234ENST00000592097 CC2D2AQ9P2K1 1620 aa15.67■□□□□ 0.1
NEDD4L-234ENST00000592097 SHROOM4Q9ULL8 1493 aa15.66■□□□□ 0.1
NEDD4L-234ENST00000592097 CECR2Q9BXF3 1484 aa15.64■□□□□ 0.09
NEDD4L-234ENST00000592097 DNAJC5Q9H3Z4 198 aa15.63■□□□□ 0.09
NEDD4L-234ENST00000592097 MYO15BQ96JP2 1530 aa15.62■□□□□ 0.09
NEDD4L-234ENST00000592097 U3KPZ7 1027 aaPredicted RBP15.55■□□□□ 0.08
NEDD4L-234ENST00000592097 ATXN8OSP0DMR3 200 aa15.52■□□□□ 0.08
NEDD4L-234ENST00000592097 EIF4G1Q04637 1599 aaKnown RBP15.5■□□□□ 0.07
NEDD4L-234ENST00000592097 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.49■□□□□ 0.07
NEDD4L-234ENST00000592097 HNRNPUL2Q1KMD3 747 aaKnown RBP15.49■□□□□ 0.07
NEDD4L-234ENST00000592097 DCAF8L2P0C7V8 631 aa15.44■□□□□ 0.06
NEDD4L-234ENST00000592097 SAMD1Q6SPF0 538 aaPredicted RBP15.43■□□□□ 0.06
NEDD4L-234ENST00000592097 RNF39Q9H2S5 420 aa15.35■□□□□ 0.05
NEDD4L-234ENST00000592097 SCRIBQ14160 1630 aa15.3■□□□□ 0.04
NEDD4L-234ENST00000592097 APLP2Q06481 763 aa15.28■□□□□ 0.04
NEDD4L-234ENST00000592097 CUX2O14529 1486 aa15.23■□□□□ 0.03
NEDD4L-234ENST00000592097 ATF5Q9Y2D1 282 aaPredicted RBP15.22■□□□□ 0.03
NEDD4L-234ENST00000592097 C1QBPQ07021 282 aaKnown RBP15.2■□□□□ 0.02
NEDD4L-234ENST00000592097 DCAF1Q9Y4B6 1507 aa15.2■□□□□ 0.02
NEDD4L-234ENST00000592097 ZCCHC6Q5VYS8 1495 aaKnown RBP15.15■□□□□ 0.02
NEDD4L-234ENST00000592097 CACNB1Q02641 598 aaPredicted RBP15.08■□□□□ 0
NEDD4L-234ENST00000592097 SPINK5Q9NQ38 1064 aaPredicted RBP15.01□□□□□ -0.01
NEDD4L-234ENST00000592097 ERCC6Q03468 1493 aa15.01□□□□□ -0.01
NEDD4L-234ENST00000592097 ZNF219Q9P2Y4 722 aaPredicted RBP15□□□□□ -0.01
NEDD4L-234ENST00000592097 CAPN15O75808 1086 aa14.93□□□□□ -0.02
NEDD4L-234ENST00000592097 TRHP20396 242 aaPredicted RBP14.9□□□□□ -0.02
NEDD4L-234ENST00000592097 THOC2Q8NI27 1593 aaKnown RBP14.83□□□□□ -0.04
NEDD4L-234ENST00000592097 POLA2Q14181 598 aa14.75□□□□□ -0.05
NEDD4L-234ENST00000592097 TRIM41Q8WV44 630 aa14.71□□□□□ -0.05
NEDD4L-234ENST00000592097 HMGXB3Q12766 1538 aa14.7□□□□□ -0.06
NEDD4L-234ENST00000592097 NCAPD3P42695 1498 aa14.69□□□□□ -0.06
NEDD4L-234ENST00000592097 DSG3P32926 999 aa14.68□□□□□ -0.06
NEDD4L-234ENST00000592097 KIF21AQ7Z4S6 1674 aa14.65□□□□□ -0.06
NEDD4L-234ENST00000592097 SMARCA2P51531 1590 aa14.65□□□□□ -0.06
NEDD4L-234ENST00000592097 NESP48681 1621 aa14.65□□□□□ -0.06
NEDD4L-234ENST00000592097 ABCB7O75027 752 aa14.64□□□□□ -0.07
NEDD4L-234ENST00000592097 LAMC3Q9Y6N6 1575 aa14.61□□□□□ -0.07
NEDD4L-234ENST00000592097 MKRN4PQ13434 485 aaPredicted RBP14.6□□□□□ -0.07
NEDD4L-234ENST00000592097 ZBTB12Q9Y330 459 aaPredicted RBP14.6□□□□□ -0.07
NEDD4L-234ENST00000592097 FBLN2P98095 1184 aa14.59□□□□□ -0.07
NEDD4L-234ENST00000592097 FKBP8Q14318 412 aa14.59□□□□□ -0.07
NEDD4L-234ENST00000592097 ATAD2BQ9ULI0 1458 aa14.57□□□□□ -0.08
NEDD4L-234ENST00000592097 BAZ1AQ9NRL2 1556 aaPredicted RBP14.56□□□□□ -0.08
NEDD4L-234ENST00000592097 SMARCA4P51532 1647 aa14.55□□□□□ -0.08
NEDD4L-234ENST00000592097 BAZ1BQ9UIG0 1483 aaKnown RBP14.47□□□□□ -0.09
NEDD4L-234ENST00000592097 WDR62O43379 1518 aa14.44□□□□□ -0.1
NEDD4L-234ENST00000592097 PEG3Q9GZU2 1588 aa14.41□□□□□ -0.1
NEDD4L-234ENST00000592097 PDS5BQ9NTI5 1447 aa14.41□□□□□ -0.1
NEDD4L-234ENST00000592097 MRC2Q9UBG0 1479 aa14.39□□□□□ -0.11
NEDD4L-234ENST00000592097 SPDYE4A6NLX3 237 aa14.38□□□□□ -0.11
NEDD4L-234ENST00000592097 RIMBP3CA6NJZ7 1639 aa14.34□□□□□ -0.11
NEDD4L-234ENST00000592097 RIMBP3BA6NNM3 1639 aa14.34□□□□□ -0.11
NEDD4L-234ENST00000592097 RIMBP3Q9UFD9 1639 aa14.34□□□□□ -0.11
NEDD4L-234ENST00000592097 PROM2Q8N271 834 aa14.26□□□□□ -0.13
NEDD4L-234ENST00000592097 OSCARQ8IYS5 282 aa14.24□□□□□ -0.13
NEDD4L-234ENST00000592097 CEP164Q9UPV0 1460 aa14.23□□□□□ -0.13
NEDD4L-234ENST00000592097 SPDYE2BA6NHP3 402 aa14.21□□□□□ -0.13
NEDD4L-234ENST00000592097 SPDYE6P0CI01 402 aa14.21□□□□□ -0.13
NEDD4L-234ENST00000592097 SPDYE2Q495Y8 402 aa14.21□□□□□ -0.13
NEDD4L-234ENST00000592097 ARHGEF11O15085 1522 aa14.18□□□□□ -0.14
NEDD4L-234ENST00000592097 CADPSQ9ULU8 1353 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms