RNA–Protein interactions for RNA: ENST00000396101.7

LST1-212, leukocyte specific transcript 1, humanhuman

TSL 1 (best) BASIC

Gene LST1, Length 459 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LST1-212ENST00000396101 SMYD5Q6GMV2 418 aa17.22■□□□□ 0.35
LST1-212ENST00000396101 FMN1Q68DA7 1419 aa17.21■□□□□ 0.35
LST1-212ENST00000396101 SOWAHBA6NEL2 793 aa17.21■□□□□ 0.35
LST1-212ENST00000396101 PNMA3Q9UL41 463 aa17.21■□□□□ 0.35
LST1-212ENST00000396101 CLIP1P30622 1438 aa17.21■□□□□ 0.34
LST1-212ENST00000396101 GPR37O15354 613 aa17.2■□□□□ 0.34
LST1-212ENST00000396101 PTPN5P54829 565 aa17.2■□□□□ 0.34
LST1-212ENST00000396101 BCAMP50895 628 aa17.19■□□□□ 0.34
LST1-212ENST00000396101 NUDT18Q6ZVK8 323 aa17.19■□□□□ 0.34
LST1-212ENST00000396101 CD109Q6YHK3 1445 aa17.19■□□□□ 0.34
LST1-212ENST00000396101 FCHSD2O94868 740 aa17.17■□□□□ 0.34
LST1-212ENST00000396101 CDK13Q14004 1512 aaKnown RBP17.15■□□□□ 0.34
LST1-212ENST00000396101 EYA1Q99502 592 aa17.14■□□□□ 0.33
LST1-212ENST00000396101 MAP3K4Q9Y6R4 1608 aa17.13■□□□□ 0.33
LST1-212ENST00000396101 CDK11AQ9UQ88 783 aaPredicted RBP17.12■□□□□ 0.33
LST1-212ENST00000396101 PPRC1Q5VV67 1664 aaKnown RBP17.12■□□□□ 0.33
LST1-212ENST00000396101 COL17A1Q9UMD9 1497 aaPredicted RBP17.12■□□□□ 0.33
LST1-212ENST00000396101 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.11■□□□□ 0.33
LST1-212ENST00000396101 SAMD7Q7Z3H4 446 aa17.1■□□□□ 0.33
LST1-212ENST00000396101 LRCH3Q96II8 777 aa17.1■□□□□ 0.33
LST1-212ENST00000396101 ADGRG1Q9Y653 693 aa17.1■□□□□ 0.33
LST1-212ENST00000396101 CEP162Q5TB80 1403 aa17.1■□□□□ 0.33
LST1-212ENST00000396101 HIC1Q14526 733 aa17.09■□□□□ 0.33
LST1-212ENST00000396101 CASKIN1Q8WXD9 1431 aa17.09■□□□□ 0.33
LST1-212ENST00000396101 TEX14Q8IWB6 1497 aa17.09■□□□□ 0.33
LST1-212ENST00000396101 KDM6BO15054 1643 aa17.08■□□□□ 0.32
LST1-212ENST00000396101 MAGI3Q5TCQ9 1506 aa17.08■□□□□ 0.32
LST1-212ENST00000396101 WBP1LQ9NX94 342 aa17.07■□□□□ 0.32
LST1-212ENST00000396101 HECW1Q76N89 1606 aa17.06■□□□□ 0.32
LST1-212ENST00000396101 CFAP43Q8NDM7 1665 aa17.05■□□□□ 0.32
LST1-212ENST00000396101 FECHP22830 423 aa17.04■□□□□ 0.32
LST1-212ENST00000396101 PLA2G2EQ9NZK7 142 aa17.04■□□□□ 0.32
LST1-212ENST00000396101 TSR3Q9UJK0 312 aaKnown RBP17.04■□□□□ 0.32
LST1-212ENST00000396101 HPS5Q9UPZ3 1129 aa17.04■□□□□ 0.32
LST1-212ENST00000396101 ABCA9Q8IUA7 1624 aa17.03■□□□□ 0.32
LST1-212ENST00000396101 FAM161AQ3B820 660 aa17.03■□□□□ 0.32
LST1-212ENST00000396101 GNPATO15228 680 aa17.02■□□□□ 0.32
LST1-212ENST00000396101 RAPGEF3O95398 923 aa17.02■□□□□ 0.32
LST1-212ENST00000396101 GPIHBP1Q8IV16 184 aa17.02■□□□□ 0.32
LST1-212ENST00000396101 PCF11O94913 1555 aaKnown RBP17.02■□□□□ 0.31
LST1-212ENST00000396101 NYAP1Q6ZVC0 841 aa17.01■□□□□ 0.31
LST1-212ENST00000396101 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.01■□□□□ 0.31
LST1-212ENST00000396101 TROQ12816 1431 aaPredicted RBP17■□□□□ 0.31
LST1-212ENST00000396101 FYCO1Q9BQS8 1478 aa16.99■□□□□ 0.31
LST1-212ENST00000396101 SWT1Q5T5J6 900 aaKnown RBP16.99■□□□□ 0.31
LST1-212ENST00000396101 LRRIQ1Q96JM4 1722 aa16.99■□□□□ 0.31
LST1-212ENST00000396101 RBM46Q8TBY0 533 aaKnown RBP16.98■□□□□ 0.31
LST1-212ENST00000396101 PHLDB1Q86UU1 1377 aa16.97■□□□□ 0.31
LST1-212ENST00000396101 EFCAB2Q5VUJ9 269 aa16.96■□□□□ 0.31
LST1-212ENST00000396101 PXYLP1Q8TE99 480 aa16.96■□□□□ 0.31
LST1-212ENST00000396101 CCDC18Q5T9S5 1454 aa16.96■□□□□ 0.31
LST1-212ENST00000396101 TTC37Q6PGP7 1564 aa16.95■□□□□ 0.3
LST1-212ENST00000396101 DNAJB2P25686 324 aa16.95■□□□□ 0.3
LST1-212ENST00000396101 ARAP3Q8WWN8 1544 aa16.95■□□□□ 0.3
LST1-212ENST00000396101 PLCH2O75038 1416 aa16.95■□□□□ 0.3
LST1-212ENST00000396101 NEO1Q92859 1461 aa16.94■□□□□ 0.3
LST1-212ENST00000396101 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.94■□□□□ 0.3
LST1-212ENST00000396101 TMEM134Q9H6X4 195 aa16.94■□□□□ 0.3
LST1-212ENST00000396101 AKNAQ7Z591 1439 aa16.94■□□□□ 0.3
LST1-212ENST00000396101 FANCAO15360 1455 aa16.93■□□□□ 0.3
LST1-212ENST00000396101 KIF14Q15058 1648 aa16.93■□□□□ 0.3
LST1-212ENST00000396101 RCCD1A6NED2 376 aa16.93■□□□□ 0.3
LST1-212ENST00000396101 IFFO2Q5TF58 517 aa16.93■□□□□ 0.3
LST1-212ENST00000396101 TULP1O00294 542 aaPredicted RBP16.92■□□□□ 0.3
LST1-212ENST00000396101 ITGBL1O95965 494 aaPredicted RBP16.92■□□□□ 0.3
LST1-212ENST00000396101 PPP4CP60510 307 aa16.92■□□□□ 0.3
LST1-212ENST00000396101 METTL3Q86U44 580 aaKnown RBP16.92■□□□□ 0.3
LST1-212ENST00000396101 OATP04181 439 aa16.9■□□□□ 0.3
LST1-212ENST00000396101 MTUS2Q5JR59 1369 aa16.89■□□□□ 0.3
LST1-212ENST00000396101 HDGFP51858 240 aaKnown RBP16.89■□□□□ 0.29
LST1-212ENST00000396101 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.88■□□□□ 0.29
LST1-212ENST00000396101 SLF2Q8IX21 1173 aa16.88■□□□□ 0.29
LST1-212ENST00000396101 VPS8Q8N3P4 1428 aa16.87■□□□□ 0.29
LST1-212ENST00000396101 SCAPERQ9BY12 1400 aa16.87■□□□□ 0.29
LST1-212ENST00000396101 ZNF777Q9ULD5 760 aaPredicted RBP16.87■□□□□ 0.29
LST1-212ENST00000396101 DENND4BO75064 1496 aaPredicted RBP16.86■□□□□ 0.29
LST1-212ENST00000396101 RNF40O75150 1001 aa16.86■□□□□ 0.29
LST1-212ENST00000396101 AFAP1Q8N556 730 aa16.85■□□□□ 0.29
LST1-212ENST00000396101 APLP1P51693 650 aa16.84■□□□□ 0.29
LST1-212ENST00000396101 LMOD2Q6P5Q4 547 aa16.84■□□□□ 0.29
LST1-212ENST00000396101 ADGRL1O94910 1474 aa16.84■□□□□ 0.29
LST1-212ENST00000396101 ARHGAP5Q13017 1502 aa16.84■□□□□ 0.29
LST1-212ENST00000396101 KANK4Q5T7N3 995 aaPredicted RBP16.83■□□□□ 0.28
LST1-212ENST00000396101 PHOX2BQ99453 314 aa16.83■□□□□ 0.28
LST1-212ENST00000396101 CFDP1Q9UEE9 299 aaPredicted RBP16.83■□□□□ 0.28
LST1-212ENST00000396101 GPATCH8Q9UKJ3 1502 aaKnown RBP16.81■□□□□ 0.28
LST1-212ENST00000396101 CCNB3Q8WWL7 1395 aa16.81■□□□□ 0.28
LST1-212ENST00000396101 MYO5CQ9NQX4 1742 aa16.81■□□□□ 0.28
LST1-212ENST00000396101 MAP2K5Q13163 448 aa16.8■□□□□ 0.28
LST1-212ENST00000396101 NECTIN2Q92692 538 aa16.8■□□□□ 0.28
LST1-212ENST00000396101 ARID4BQ4LE39 1312 aaPredicted RBP16.79■□□□□ 0.28
LST1-212ENST00000396101 HNRNPMP52272 730 aaKnown RBP eCLIP16.79■□□□□ 0.28
LST1-212ENST00000396101 ZNF644Q9H582 1327 aaPredicted RBP16.78■□□□□ 0.28
LST1-212ENST00000396101 FRMPD1Q5SYB0 1578 aa16.78■□□□□ 0.28
LST1-212ENST00000396101 CFAP74Q9C0B2 1584 aa16.78■□□□□ 0.28
LST1-212ENST00000396101 SLC24A1O60721 1099 aa16.78■□□□□ 0.28
LST1-212ENST00000396101 CDC42BPBQ9Y5S2 1711 aa16.77■□□□□ 0.28
LST1-212ENST00000396101 TJAP1Q5JTD0 557 aa16.77■□□□□ 0.28
LST1-212ENST00000396101 SLC10A3P09131 477 aa16.76■□□□□ 0.27
LST1-212ENST00000396101 POGZQ7Z3K3 1410 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms