RNA–Protein interactions for RNA: snR53

snR53, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR53, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR53snR53 VPS15P22219 1454 aa-6.71□□□□□ -3.48
snR53snR53 Q0017Q9ZZX8 53 aa-6.71□□□□□ -3.48
snR53snR53 FIG2P25653 1609 aa-6.73□□□□□ -3.49
snR53snR53 YBR200W-AQ3E755 54 aa-6.74□□□□□ -3.49
snR53snR53 NOP10Q6Q547 58 aaPredicted RBP-6.74□□□□□ -3.49
snR53snR53 RPS27BP38711 82 aa-6.75□□□□□ -3.49
snR53snR53 YLR099W-AQ3E798 87 aa-6.76□□□□□ -3.49
snR53snR53 PDR11P40550 1411 aa-6.77□□□□□ -3.49
snR53snR53 KOG1P38873 1557 aa-6.78□□□□□ -3.49
snR53snR53 HMRA1P0CY11 126 aa-6.78□□□□□ -3.49
snR53snR53 ATP17Q06405 101 aa-6.78□□□□□ -3.49
snR53snR53 FYV7Q12247 151 aa-6.79□□□□□ -3.5
snR53snR53 YLR146W-AQ2V2P1 62 aa-6.82□□□□□ -3.5
snR53snR53 YOR011W-AQ3E807 68 aa-6.84□□□□□ -3.5
snR53snR53 POL1P13382 1468 aa-6.85□□□□□ -3.51
snR53snR53 YIL156W-BQ2V2P4 73 aa-6.86□□□□□ -3.51
snR53snR53 TRA1P38811 3744 aa-6.86□□□□□ -3.51
snR53snR53 PDR10P51533 1564 aa-6.86□□□□□ -3.51
snR53snR53 YGR146C-AQ8TGT9 53 aa-6.87□□□□□ -3.51
snR53snR53 YDR042CQ03205 200 aa-6.89□□□□□ -3.51
snR53snR53 QCR6P00127 147 aa-6.9□□□□□ -3.51
snR53snR53 HAP1P0CE41 1502 aa-6.91□□□□□ -3.51
snR53snR53 RRT15Q3E811 62 aa-6.91□□□□□ -3.52
snR53snR53 VMA7P39111 118 aa-6.94□□□□□ -3.52
snR53snR53 YMR090WQ04304 227 aaKnown RBP-6.94□□□□□ -3.52
snR53snR53 IRA1P18963 3092 aa-6.95□□□□□ -3.52
snR53snR53 YDL022C-AP0C5L6 82 aa-6.99□□□□□ -3.53
snR53snR53 YPL225WQ08971 146 aaKnown RBP-6.99□□□□□ -3.53
snR53snR53 YBL039W-BP0C268 59 aa-7.01□□□□□ -3.53
snR53snR53 MHF2Q3E829 80 aa-7.01□□□□□ -3.53
snR53snR53 DYN2Q02647 92 aa-7.05□□□□□ -3.54
snR53snR53 YOR192C-CQ3E736 78 aa-7.05□□□□□ -3.54
snR53snR53 KSH1Q8TGJ3 72 aa-7.06□□□□□ -3.54
snR53snR53 RPA190P10964 1664 aaKnown RBP-7.08□□□□□ -3.54
snR53snR53 YER039C-AP0CD97 72 aa-7.1□□□□□ -3.55
snR53snR53 THO2P53552 1597 aaKnown RBP-7.11□□□□□ -3.55
snR53snR53 WIP1Q2V2P8 89 aa-7.11□□□□□ -3.55
snR53snR53 GEA1P47102 1408 aaPredicted RBP-7.12□□□□□ -3.55
snR53snR53 IRA2P19158 3079 aa-7.14□□□□□ -3.55
snR53snR53 GDB1Q06625 1536 aa-7.18□□□□□ -3.56
snR53snR53 SPP41P38904 1435 aa-7.19□□□□□ -3.56
snR53snR53 CHD1P32657 1468 aa-7.22□□□□□ -3.56
snR53snR53 FKS3Q04952 1785 aa-7.22□□□□□ -3.57
snR53snR53 YOR314WQ12506 109 aa-7.22□□□□□ -3.57
snR53snR53 YOR105WQ08504 108 aa-7.25□□□□□ -3.57
snR53snR53 YML054C-AQ3E809 52 aa-7.25□□□□□ -3.57
snR53snR53 SUS1Q6WNK7 96 aa-7.29□□□□□ -3.58
snR53snR53 YBR230W-AQ3E762 66 aa-7.3□□□□□ -3.58
snR53snR53 SIN3P22579 1536 aa-7.32□□□□□ -3.58
snR53snR53 SPI1P40092 148 aa-7.34□□□□□ -3.58
snR53snR53 YMR082CQ04276 118 aa-7.34□□□□□ -3.58
snR53snR53 REV3P14284 1504 aa-7.36□□□□□ -3.59
snR53snR53 MSL1P40567 111 aaPredicted RBP-7.36□□□□□ -3.59
snR53snR53 YKL065W-AQ2V2P2 73 aa-7.42□□□□□ -3.6
snR53snR53 DNF1P32660 1571 aa-7.44□□□□□ -3.6
snR53snR53 YOR032W-AQ8TGS1 66 aa-7.44□□□□□ -3.6
snR53snR53 GEA2P39993 1459 aaKnown RBP-7.44□□□□□ -3.6
snR53snR53 SWR1Q05471 1514 aa-7.47□□□□□ -3.61
snR53snR53 YSP2Q06681 1438 aa-7.52□□□□□ -3.61
snR53snR53 YGL194C-AQ2V2P6 80 aa-7.55□□□□□ -3.62
snR53snR53 TSC11P40061 1430 aa-7.55□□□□□ -3.62
snR53snR53 TIM12P32830 109 aa-7.57□□□□□ -3.62
snR53snR53 YMR175W-AQ3E766 64 aa-7.6□□□□□ -3.63
snR53snR53 YMR105W-AQ8TGS8 64 aa-7.6□□□□□ -3.63
snR53snR53 RPL29P05747 59 aaPredicted RBP-7.63□□□□□ -3.63
snR53snR53 YGR035W-AQ45U48 73 aa-7.63□□□□□ -3.63
snR53snR53 YGR121W-AQ3E816 71 aa-7.65□□□□□ -3.63
snR53snR53 QCR9P22289 66 aa-7.68□□□□□ -3.64
snR53snR53 SNQ2P32568 1501 aaKnown RBP-7.68□□□□□ -3.64
snR53snR53 YOR304C-AO14468 76 aa-7.69□□□□□ -3.64
snR53snR53 RPS12P48589 143 aaKnown RBP-7.69□□□□□ -3.64
snR53snR53 YDR034C-AP0C289 58 aa-7.71□□□□□ -3.64
snR53snR53 SSS1P35179 80 aa-7.71□□□□□ -3.64
snR53snR53 YPR145C-AQ2V2P0 78 aa-7.71□□□□□ -3.64
snR53snR53 HUB1Q6Q546 73 aa-7.74□□□□□ -3.65
snR53snR53 PAU7P39545 55 aa-7.77□□□□□ -3.65
snR53snR53 MDS3P53094 1487 aa-7.77□□□□□ -3.65
snR53snR53 PDR12Q02785 1511 aa-7.78□□□□□ -3.66
snR53snR53 TY1B-DR4Q07793 1604 aa-7.84□□□□□ -3.66
snR53snR53 SWM2P40342 146 aa-7.86□□□□□ -3.67
snR53snR53 YOR093CQ12275 1648 aa-7.87□□□□□ -3.67
snR53snR53 PDR15Q04182 1529 aaKnown RBP-7.93□□□□□ -3.68
snR53snR53 ARO1P08566 1588 aaKnown RBP-7.93□□□□□ -3.68
snR53snR53 MMS22Q06164 1454 aa-7.94□□□□□ -3.68
snR53snR53 FLO1P32768 1537 aa-7.96□□□□□ -3.68
snR53snR53 YCL001W-BQ96VH2 84 aa-7.96□□□□□ -3.68
snR53snR53 YOR316C-AQ3E806 69 aa-7.98□□□□□ -3.69
snR53snR53 DNF2Q12675 1612 aa-8.01□□□□□ -3.69
snR53snR53 YLR157W-DP0CE99 70 aa-8.02□□□□□ -3.69
snR53snR53 YER137CP40083 148 aaKnown RBP-8.04□□□□□ -3.7
snR53snR53 VPS13Q07878 3144 aa-8.04□□□□□ -3.7
snR53snR53 ESP1Q03018 1630 aa-8.07□□□□□ -3.7
snR53snR53 RPS30AP0CX33 63 aaKnown RBP-8.08□□□□□ -3.7
snR53snR53 RPS30BP0CX34 63 aaKnown RBP-8.08□□□□□ -3.7
snR53snR53 RRP5Q05022 1729 aaKnown RBP-8.09□□□□□ -3.71
snR53snR53 MLP1Q02455 1875 aaKnown RBP-8.13□□□□□ -3.71
snR53snR53 ERI1P62651 68 aaKnown RBP-8.17□□□□□ -3.72
snR53snR53 IQG1Q12280 1495 aa-8.18□□□□□ -3.72
snR53snR53 RPO31P04051 1460 aa-8.2□□□□□ -3.72
snR53snR53 YHR073W-AP0C5N7 58 aa-8.21□□□□□ -3.72
Retrieved 100 of 5,963 RNA–protein pairs in 31 ms