RNA–Protein interactions for RNA: YML040W

YML040W, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YML040W, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YML040WYML040W YBR090CP38253 122 aa1.42□□□□□ -2.18
YML040WYML040W SEC7P11075 2009 aaKnown RBP1.42□□□□□ -2.18
YML040WYML040W UBC5P15732 148 aa1.41□□□□□ -2.18
YML040WYML040W IMP2P46972 177 aa1.41□□□□□ -2.18
YML040WYML040W FYV7Q12247 151 aa1.41□□□□□ -2.18
YML040WYML040W MDS3P53094 1487 aa1.41□□□□□ -2.18
YML040WYML040W SKI3P17883 1432 aaKnown RBP1.41□□□□□ -2.18
YML040WYML040W YLR419WQ06698 1435 aaKnown RBP1.41□□□□□ -2.18
YML040WYML040W KRE5P22023 1365 aa1.41□□□□□ -2.18
YML040WYML040W URB1P34241 1764 aaKnown RBP1.4□□□□□ -2.18
YML040WYML040W TCB3Q03640 1545 aaKnown RBP1.39□□□□□ -2.19
YML040WYML040W CCW14O13547 238 aa1.38□□□□□ -2.19
YML040WYML040W PAU5P43575 122 aa1.38□□□□□ -2.19
YML040WYML040W YPL038W-AQ3E7B4 63 aa1.38□□□□□ -2.19
YML040WYML040W YCR095W-AQ3E787 52 aa1.37□□□□□ -2.19
YML040WYML040W GCV3P39726 170 aaPredicted RBP1.36□□□□□ -2.19
YML040WYML040W RSM19P53733 91 aaPredicted RBP1.36□□□□□ -2.19
YML040WYML040W YRF1-6P53819 1859 aa1.35□□□□□ -2.19
YML040WYML040W YDR210WQ03482 75 aa1.35□□□□□ -2.19
YML040WYML040W YHR173CP38864 112 aa1.34□□□□□ -2.2
YML040WYML040W PDR11P40550 1411 aa1.33□□□□□ -2.2
YML040WYML040W SMC4Q12267 1418 aa1.33□□□□□ -2.2
YML040WYML040W SHU1P38751 150 aa1.33□□□□□ -2.2
YML040WYML040W YIL086CP40503 102 aa1.33□□□□□ -2.2
YML040WYML040W KSH1Q8TGJ3 72 aa1.33□□□□□ -2.2
YML040WYML040W TOP2P06786 1428 aaKnown RBP1.33□□□□□ -2.2
YML040WYML040W BUD4P47136 1447 aa1.33□□□□□ -2.2
YML040WYML040W PAU6P0CE90 120 aa1.32□□□□□ -2.2
YML040WYML040W PAU18P0CE91 120 aa1.32□□□□□ -2.2
YML040WYML040W SNA2P56508 79 aa1.31□□□□□ -2.2
YML040WYML040W MMS1Q06211 1407 aa1.31□□□□□ -2.2
YML040WYML040W TY3B-IQ7LHG5 1498 aaKnown RBP1.31□□□□□ -2.2
YML040WYML040W MIX14Q04341 121 aa1.3□□□□□ -2.2
YML040WYML040W YPL225WQ08971 146 aaKnown RBP1.3□□□□□ -2.2
YML040WYML040W BNI1P41832 1953 aa1.29□□□□□ -2.2
YML040WYML040W BRR2P32639 2163 aaKnown RBP1.29□□□□□ -2.2
YML040WYML040W YOR289WQ12012 251 aaPredicted RBP1.29□□□□□ -2.2
YML040WYML040W GEA1P47102 1408 aaPredicted RBP1.28□□□□□ -2.2
YML040WYML040W MYO4P32492 1471 aa1.28□□□□□ -2.2
YML040WYML040W ROX3P25046 220 aa1.28□□□□□ -2.2
YML040WYML040W MPC2P38857 129 aa1.28□□□□□ -2.2
YML040WYML040W YBR072C-AQ3E794 53 aa1.28□□□□□ -2.2
YML040WYML040W SNF2P22082 1703 aa1.27□□□□□ -2.21
YML040WYML040W TY4B-HP0C2J7 1802 aa1.27□□□□□ -2.21
YML040WYML040W COX12Q01519 83 aa1.27□□□□□ -2.21
YML040WYML040W PRP8P33334 2413 aaKnown RBP1.27□□□□□ -2.21
YML040WYML040W HMRA1P0CY11 126 aa1.26□□□□□ -2.21
YML040WYML040W MRX7P53869 86 aa1.26□□□□□ -2.21
YML040WYML040W ZEO1Q08245 113 aa1.26□□□□□ -2.21
YML040WYML040W YDR010CQ12426 110 aa1.26□□□□□ -2.21
YML040WYML040W YOL164W-AQ3E7A5 60 aa1.26□□□□□ -2.21
YML040WYML040W YKL068W-AQ3E826 78 aa1.26□□□□□ -2.21
YML040WYML040W YCL001W-BQ96VH2 84 aa1.26□□□□□ -2.21
YML040WYML040W XRN1P22147 1528 aaKnown RBP1.26□□□□□ -2.21
YML040WYML040W RRT15Q3E811 62 aa1.25□□□□□ -2.21
YML040WYML040W SRB8P25648 1427 aa1.25□□□□□ -2.21
YML040WYML040W UFD4P33202 1483 aa1.25□□□□□ -2.21
YML040WYML040W YBL071CP38185 102 aa1.24□□□□□ -2.21
YML040WYML040W SSN2P38931 1420 aa1.24□□□□□ -2.21
YML040WYML040W SPT6P23615 1451 aaKnown RBP1.24□□□□□ -2.21
YML040WYML040W GEA2P39993 1459 aaKnown RBP1.24□□□□□ -2.21
YML040WYML040W MMS22Q06164 1454 aa1.24□□□□□ -2.21
YML040WYML040W COX19Q3E731 98 aa1.23□□□□□ -2.21
YML040WYML040W YNR034W-AQ3E841 98 aa1.23□□□□□ -2.21
YML040WYML040W THO2P53552 1597 aaKnown RBP1.22□□□□□ -2.21
YML040WYML040W SCC2Q04002 1493 aa1.22□□□□□ -2.21
YML040WYML040W EMC5P40540 141 aa1.22□□□□□ -2.21
YML040WYML040W ICY1Q04329 127 aa1.22□□□□□ -2.21
YML040WYML040W IRC20Q06554 1556 aa1.22□□□□□ -2.21
YML040WYML040W RPO31P04051 1460 aa1.21□□□□□ -2.22
YML040WYML040W MRP17P28778 131 aa1.21□□□□□ -2.22
YML040WYML040W BLM10P43583 2143 aa1.21□□□□□ -2.22
YML040WYML040W NHP10Q03435 203 aa1.21□□□□□ -2.22
YML040WYML040W REV3P14284 1504 aa1.21□□□□□ -2.22
YML040WYML040W SIN3P22579 1536 aa1.21□□□□□ -2.22
YML040WYML040W MRPL38P35996 138 aaPredicted RBP1.2□□□□□ -2.22
YML040WYML040W YHL005CP38752 130 aa1.2□□□□□ -2.22
YML040WYML040W SPC1P46965 94 aa1.2□□□□□ -2.22
YML040WYML040W PAU20Q08322 120 aa1.2□□□□□ -2.22
YML040WYML040W PEP1P32319 1579 aa1.2□□□□□ -2.22
YML040WYML040W PDR10P51533 1564 aa1.2□□□□□ -2.22
YML040WYML040W NUP170P38181 1502 aa1.2□□□□□ -2.22
YML040WYML040W SWR1Q05471 1514 aa1.2□□□□□ -2.22
YML040WYML040W POL2P21951 2222 aaKnown RBP1.2□□□□□ -2.22
YML040WYML040W RPA12P32529 125 aaKnown RBP1.19□□□□□ -2.22
YML040WYML040W TY1B-DR4Q07793 1604 aa1.19□□□□□ -2.22
YML040WYML040W MYO1P08964 1928 aa1.19□□□□□ -2.22
YML040WYML040W SSK2P53599 1579 aa1.18□□□□□ -2.22
YML040WYML040W RPS11AP0CX47 156 aaKnown RBP1.18□□□□□ -2.22
YML040WYML040W RPS11BP0CX48 156 aaKnown RBP1.18□□□□□ -2.22
YML040WYML040W SWM2P40342 146 aa1.18□□□□□ -2.22
YML040WYML040W CAT8P39113 1433 aa1.18□□□□□ -2.22
YML040WYML040W MON2P48563 1636 aaPredicted RBP1.18□□□□□ -2.22
YML040WYML040W PDR5P33302 1511 aaKnown RBP1.17□□□□□ -2.22
YML040WYML040W PAU1P0CE88 120 aa1.17□□□□□ -2.22
YML040WYML040W PAU14P0CE89 120 aa1.17□□□□□ -2.22
YML040WYML040W PAU8P0CE92 120 aa1.17□□□□□ -2.22
YML040WYML040W PAU11P0CE93 120 aa1.17□□□□□ -2.22
YML040WYML040W SSS1P35179 80 aa1.17□□□□□ -2.22
YML040WYML040W PAU13P38725 120 aa1.17□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 29.2 ms