RNA–Protein interactions for RNA: YML029W

USA1, Transcript of Scaffold subunit of the Hrd1p ubiquitin ligase, yeastyeast

Gene USA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USA1YML029W PSD1P39006 500 aa3.26□□□□□ -1.89
USA1YML029W YIL077CP40508 320 aa3.26□□□□□ -1.89
USA1YML029W YIL012WP40551 113 aa3.26□□□□□ -1.89
USA1YML029W MRPL22P53881 309 aa3.26□□□□□ -1.89
USA1YML029W HRD1Q08109 551 aa3.26□□□□□ -1.89
USA1YML029W EAF3Q12432 401 aa3.26□□□□□ -1.89
USA1YML029W PRM4Q12498 284 aa3.26□□□□□ -1.89
USA1YML029W UBA3Q99344 299 aa3.26□□□□□ -1.89
USA1YML029W YLL053CP0CD98 152 aa3.25□□□□□ -1.89
USA1YML029W PET122P10355 254 aa3.25□□□□□ -1.89
USA1YML029W YMR31P19955 123 aa3.25□□□□□ -1.89
USA1YML029W OCH1P31755 480 aa3.25□□□□□ -1.89
USA1YML029W CBT1P36038 271 aaPredicted RBP3.25□□□□□ -1.89
USA1YML029W SWM2P40342 146 aa3.25□□□□□ -1.89
USA1YML029W GON7P46984 123 aa3.25□□□□□ -1.89
USA1YML029W SNX4P47057 423 aa3.25□□□□□ -1.89
USA1YML029W YJR011CP47086 261 aaPredicted RBP3.25□□□□□ -1.89
USA1YML029W ALG9P53868 555 aaKnown RBP3.25□□□□□ -1.89
USA1YML029W SNA4Q07549 140 aa3.25□□□□□ -1.89
USA1YML029W FRE8Q12209 686 aa3.25□□□□□ -1.89
USA1YML029W MIR1P23641 311 aaKnown RBP3.25□□□□□ -1.89
USA1YML029W NNK1P36003 928 aa3.25□□□□□ -1.89
USA1YML029W POP8P38208 133 aa3.25□□□□□ -1.89
USA1YML029W TTI2P47168 421 aa3.25□□□□□ -1.89
USA1YML029W YGL114WP53134 725 aa3.25□□□□□ -1.89
USA1YML029W RDL1Q12305 139 aaKnown RBP3.25□□□□□ -1.89
USA1YML029W RTR2Q12378 196 aa3.25□□□□□ -1.89
USA1YML029W RTC3P38804 111 aaPredicted RBP3.24□□□□□ -1.89
USA1YML029W YJL118WP47022 219 aa3.24□□□□□ -1.89
USA1YML029W YHC3P47040 408 aa3.24□□□□□ -1.89
USA1YML029W NIF3P53081 288 aa3.24□□□□□ -1.89
USA1YML029W MRPL50P53724 139 aa3.24□□□□□ -1.89
USA1YML029W NRG1Q03125 231 aa3.24□□□□□ -1.89
USA1YML029W VAM3Q12241 283 aa3.24□□□□□ -1.89
USA1YML029W YPR108W-AQ3E7B3 70 aa3.24□□□□□ -1.89
USA1YML029W CKS1P20486 150 aaKnown RBP3.24□□□□□ -1.89
USA1YML029W RPB7P34087 171 aa3.24□□□□□ -1.89
USA1YML029W SWD3P38123 315 aa3.24□□□□□ -1.89
USA1YML029W VMA22P38784 181 aa3.24□□□□□ -1.89
USA1YML029W SLX9P53251 210 aaPredicted RBP3.24□□□□□ -1.89
USA1YML029W INN1P53901 409 aa3.24□□□□□ -1.89
USA1YML029W CAB5Q03941 241 aa3.24□□□□□ -1.89
USA1YML029W PLP1Q04004 230 aa3.24□□□□□ -1.89
USA1YML029W FIT1Q04433 528 aa3.24□□□□□ -1.89
USA1YML029W DPB4Q04603 196 aaKnown RBP3.24□□□□□ -1.89
USA1YML029W RTT103Q05543 409 aa3.24□□□□□ -1.89
USA1YML029W YDL086WQ07505 273 aa3.24□□□□□ -1.89
USA1YML029W IRC25Q07951 179 aa3.24□□□□□ -1.89
USA1YML029W YOR292CQ08743 309 aa3.24□□□□□ -1.89
USA1YML029W ATG31Q12421 196 aa3.24□□□□□ -1.89
USA1YML029W ACB1P31787 87 aa3.23□□□□□ -1.89
USA1YML029W SUA5P32579 426 aa3.23□□□□□ -1.89
USA1YML029W YGR210CP42942 411 aa3.23□□□□□ -1.89
USA1YML029W STD1Q02794 444 aa3.23□□□□□ -1.89
USA1YML029W CAC2Q04199 468 aa3.23□□□□□ -1.89
USA1YML029W YLR224WQ05947 369 aa3.23□□□□□ -1.89
USA1YML029W TFB5Q3E7C1 72 aaPredicted RBP3.23□□□□□ -1.89
USA1YML029W YMR105W-AQ8TGS8 64 aa3.23□□□□□ -1.89
USA1YML029W RPL39P04650 51 aa3.23□□□□□ -1.89
USA1YML029W QCR2P07257 368 aa3.23□□□□□ -1.89
USA1YML029W PHO85P17157 305 aa3.23□□□□□ -1.89
USA1YML029W RPB9P27999 122 aa3.23□□□□□ -1.89
USA1YML029W CDS1P38221 457 aa3.23□□□□□ -1.89
USA1YML029W COS8P38723 381 aa3.23□□□□□ -1.89
USA1YML029W IKI1P38874 309 aa3.23□□□□□ -1.89
USA1YML029W IRC24P40580 263 aa3.23□□□□□ -1.89
USA1YML029W YDL183CP48569 320 aa3.23□□□□□ -1.89
USA1YML029W UBP8P50102 471 aa3.23□□□□□ -1.89
USA1YML029W YGL117WP53133 265 aa3.23□□□□□ -1.89
USA1YML029W HSK3P69852 69 aa3.23□□□□□ -1.89
USA1YML029W THI74Q04083 370 aa3.23□□□□□ -1.89
USA1YML029W TRI1Q05024 226 aa3.23□□□□□ -1.89
USA1YML029W TMC1Q08422 150 aaPredicted RBP3.23□□□□□ -1.89
USA1YML029W FEX2Q08991 375 aa3.23□□□□□ -1.89
USA1YML029W TRA1P38811 3744 aa3.22□□□□□ -1.89
USA1YML029W COQ2P32378 372 aa3.22□□□□□ -1.89
USA1YML029W GLY1P37303 387 aaKnown RBP3.22□□□□□ -1.89
USA1YML029W RFC2P40348 353 aa3.22□□□□□ -1.89
USA1YML029W ECM27P47144 725 aa3.22□□□□□ -1.89
USA1YML029W RPL21AQ02753 160 aaKnown RBP3.22□□□□□ -1.89
USA1YML029W YMR317WQ04893 1140 aa3.22□□□□□ -1.89
USA1YML029W YDL009CQ12210 107 aa3.22□□□□□ -1.89
USA1YML029W YLR108CQ12259 485 aa3.22□□□□□ -1.89
USA1YML029W RPL21BQ12672 160 aaKnown RBP3.22□□□□□ -1.89
USA1YML029W YOR192C-CQ3E736 78 aa3.22□□□□□ -1.89
USA1YML029W BOL1Q3E793 110 aa3.22□□□□□ -1.89
USA1YML029W VPS63O13549 108 aa3.22□□□□□ -1.89
USA1YML029W TPI1P00942 248 aaKnown RBP3.22□□□□□ -1.89
USA1YML029W YCR061WP25639 631 aa3.22□□□□□ -1.89
USA1YML029W GEP4P38812 185 aa3.22□□□□□ -1.89
USA1YML029W YDR114CQ04597 100 aa3.22□□□□□ -1.89
USA1YML029W COA4Q05809 96 aa3.22□□□□□ -1.89
USA1YML029W PAM18Q07914 168 aa3.22□□□□□ -1.89
USA1YML029W CSI2Q08054 341 aa3.22□□□□□ -1.89
USA1YML029W FEX1Q08913 375 aa3.22□□□□□ -1.89
USA1YML029W YCL048W-AQ2V2Q2 79 aa3.22□□□□□ -1.89
USA1YML029W BPH1P25356 2167 aa3.21□□□□□ -1.89
USA1YML029W ERG2P32352 222 aa3.21□□□□□ -1.9
USA1YML029W ADH5P38113 351 aaKnown RBP3.21□□□□□ -1.9
USA1YML029W YHR138CP38841 114 aaPredicted RBP3.21□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 26.6 ms