Protein–RNA interactions for Protein: P40348

RFC2, Replication factor C subunit 2, yeastyeast

Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RFC2P40348 NSR1YGR159C 1245 nt16.73■□□□□ 0.27
RFC2P40348 YML009W-BYML009W-B 477 nt16.43■□□□□ 0.22
RFC2P40348 NOP1YDL014W 984 nt15.95■□□□□ 0.14
RFC2P40348 MDJ1YFL016C 1536 nt15.33■□□□□ 0.05
RFC2P40348 YKL036CYKL036C 393 nt14.55□□□□□ -0.08
RFC2P40348 YJL027CYJL027C 417 nt14.03□□□□□ -0.16
RFC2P40348 SRX1YKL086W 384 nt13.85□□□□□ -0.19
RFC2P40348 Q0297Q0297 156 nt13.83□□□□□ -0.2
RFC2P40348 SSA3YBL075C 1950 nt13.77□□□□□ -0.21
RFC2P40348 DBP2YNL112W 1641 nt13.44□□□□□ -0.26
RFC2P40348 YBR190WYBR190W 312 nt13.16□□□□□ -0.3
RFC2P40348 YCR051WYCR051W 669 nt13.14□□□□□ -0.31
RFC2P40348 SCS3YGL126W 1143 nt13.09□□□□□ -0.31
RFC2P40348 TRN1tP(UGG)A 72 nt12.8□□□□□ -0.36
RFC2P40348 SUF9tP(UGG)F 72 nt12.8□□□□□ -0.36
RFC2P40348 SUF8tP(UGG)H 72 nt12.8□□□□□ -0.36
RFC2P40348 tP(UGG)LtP(UGG)L 72 nt12.8□□□□□ -0.36
RFC2P40348 SUF7tP(UGG)M 72 nt12.8□□□□□ -0.36
RFC2P40348 tP(UGG)N1tP(UGG)N1 72 nt12.8□□□□□ -0.36
RFC2P40348 tP(UGG)N2tP(UGG)N2 72 nt12.8□□□□□ -0.36
RFC2P40348 tP(UGG)O1tP(UGG)O1 72 nt12.8□□□□□ -0.36
RFC2P40348 SUF11tP(UGG)O2 72 nt12.8□□□□□ -0.36
RFC2P40348 RTC3YHR087W 336 nt12.76□□□□□ -0.37
RFC2P40348 CCC1YLR220W 969 nt12.57□□□□□ -0.4
RFC2P40348 YOL085CYOL085C 342 nt12.54□□□□□ -0.4
RFC2P40348 RPP1BYDL130W 321 nt12.41□□□□□ -0.42
RFC2P40348 SCJ1YMR214W 1134 nt12.39□□□□□ -0.43
RFC2P40348 RVS167YDR388W 1449 nt12.38□□□□□ -0.43
RFC2P40348 PUT4YOR348C 1884 nt12.37□□□□□ -0.43
RFC2P40348 PKP1YIL042C 1185 nt12.32□□□□□ -0.44
RFC2P40348 ARE1YCR048W 1833 nt12□□□□□ -0.49
RFC2P40348 tP(UGG)O3tP(UGG)O3 72 nt11.92□□□□□ -0.5
RFC2P40348 SHR5YOL110W 714 nt11.91□□□□□ -0.5
RFC2P40348 POA1YBR022W 534 nt11.87□□□□□ -0.51
RFC2P40348 URN1YPR152C 1398 nt11.85□□□□□ -0.51
RFC2P40348 SPT5YML010W 3192 nt11.84□□□□□ -0.51
RFC2P40348 SAH1YER043C 1350 nt11.82□□□□□ -0.52
RFC2P40348 SSA4YER103W 1929 nt11.82□□□□□ -0.52
RFC2P40348 PET122YER153C 765 nt11.82□□□□□ -0.52
RFC2P40348 YHR049C-AYHR049C-A 297 nt11.81□□□□□ -0.52
RFC2P40348 SCR1SCR1 522 nt11.81□□□□□ -0.52
RFC2P40348 OPI9YLR338W 858 nt11.79□□□□□ -0.52
RFC2P40348 BSC6YOL137W 1494 nt11.74□□□□□ -0.53
RFC2P40348 ATS1YAL020C 1002 nt11.71□□□□□ -0.53
RFC2P40348 DEP1YAL013W 1218 nt11.7□□□□□ -0.54
RFC2P40348 BDF1YLR399C 2061 nt11.56□□□□□ -0.56
RFC2P40348 PAC11YDR488C 1602 nt11.54□□□□□ -0.56
RFC2P40348 YDJ1YNL064C 1230 nt11.54□□□□□ -0.56
RFC2P40348 RPN10YHR200W 807 nt11.51□□□□□ -0.57
RFC2P40348 RRN5YLR141W 1092 nt11.49□□□□□ -0.57
RFC2P40348 YNL208WYNL208W 600 nt11.46□□□□□ -0.57
RFC2P40348 NVJ2YPR091C 2313 nt11.43□□□□□ -0.58
RFC2P40348 BUD23YCR047C 828 nt11.43□□□□□ -0.58
RFC2P40348 PUN1YLR414C 792 nt11.4□□□□□ -0.58
RFC2P40348 PTC2YER089C 1395 nt11.35□□□□□ -0.59
RFC2P40348 TAT1YBR069C 1860 nt11.34□□□□□ -0.59
RFC2P40348 GAR1YHR089C 618 nt11.32□□□□□ -0.6
RFC2P40348 NAB2YGL122C 1578 nt11.26□□□□□ -0.61
RFC2P40348 RSB1YOR049C 1065 nt11.26□□□□□ -0.61
RFC2P40348 YJR018WYJR018W 363 nt11.25□□□□□ -0.61
RFC2P40348 YER088W-BYER088W-B 147 nt11.24□□□□□ -0.61
RFC2P40348 FIS1YIL065C 468 nt11.18□□□□□ -0.62
RFC2P40348 YJR120WYJR120W 351 nt11.13□□□□□ -0.63
RFC2P40348 FPS1YLL043W 2010 nt11.08□□□□□ -0.64
RFC2P40348 MEP2YNL142W 1500 nt11.07□□□□□ -0.64
RFC2P40348 DAL1YIR027C 1383 nt11.04□□□□□ -0.64
RFC2P40348 SSA1YAL005C 1929 nt10.99□□□□□ -0.65
RFC2P40348 TIR1YER011W 765 nt10.98□□□□□ -0.65
RFC2P40348 PHO4YFR034C 939 nt10.97□□□□□ -0.65
RFC2P40348 YPS1YLR120C 1710 nt10.93□□□□□ -0.66
RFC2P40348 FPR4YLR449W 1179 nt10.93□□□□□ -0.66
RFC2P40348 DCW1YKL046C 1350 nt10.9□□□□□ -0.66
RFC2P40348 INM2YDR287W 879 nt10.88□□□□□ -0.67
RFC2P40348 RPP2BYDR382W 333 nt10.85□□□□□ -0.67
RFC2P40348 PST2YDR032C 597 nt10.83□□□□□ -0.68
RFC2P40348 SRB2YHR041C 633 nt10.81□□□□□ -0.68
RFC2P40348 YDR095CYDR095C 411 nt10.8□□□□□ -0.68
RFC2P40348 YHR165W-AYHR165W-A 312 nt10.76□□□□□ -0.69
RFC2P40348 YBL100CYBL100C 315 nt10.75□□□□□ -0.69
RFC2P40348 EMI2YDR516C 1503 nt10.72□□□□□ -0.69
RFC2P40348 YBR220CYBR220C 1683 nt10.71□□□□□ -0.69
RFC2P40348 UME6YDR207C 2511 nt10.65□□□□□ -0.7
RFC2P40348 PTP1YDL230W 1008 nt10.64□□□□□ -0.71
RFC2P40348 BDH2YAL061W 1254 nt10.63□□□□□ -0.71
RFC2P40348 YDL221WYDL221W 552 nt10.62□□□□□ -0.71
RFC2P40348 FUN26YAL022C 1554 nt10.61□□□□□ -0.71
RFC2P40348 CAC2YML102W 1407 nt10.61□□□□□ -0.71
RFC2P40348 GUT2YIL155C 1950 nt10.59□□□□□ -0.71
RFC2P40348 YMR090WYMR090W 684 nt10.58□□□□□ -0.72
RFC2P40348 SDH1YKL148C 1923 nt10.58□□□□□ -0.72
RFC2P40348 RPP2AYOL039W 321 nt10.55□□□□□ -0.72
RFC2P40348 PCH2YBR186W 1695 nt10.51□□□□□ -0.73
RFC2P40348 ALF1YNL148C 765 nt10.48□□□□□ -0.73
RFC2P40348 IRC15YPL017C 1500 nt10.48□□□□□ -0.73
RFC2P40348 PIB2YGL023C 1908 nt10.46□□□□□ -0.74
RFC2P40348 CCT6YDR188W 1641 nt10.45□□□□□ -0.74
RFC2P40348 WWM1YFL010C 636 nt10.44□□□□□ -0.74
RFC2P40348 TRM9YML014W 840 nt10.44□□□□□ -0.74
RFC2P40348 SCC4YER147C 1875 nt10.43□□□□□ -0.74
RFC2P40348 YKL097CYKL097C 411 nt10.43□□□□□ -0.74
Retrieved 100 of 7,029 protein–RNA pairs in 7.5 ms