RNA–Protein interactions for RNA: YLR008C

PAM18, Transcript of Subunit of the import motor (PAM complex), yeast

Gene PAM18, Length 507 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PAM18	YLR008C	ZDS1	P50111	915 aa	Known RBP	5.08	□□□□□ -1.6
PAM18	YLR008C	RDS2	P19541	446 aa	Known RBP	5.07	□□□□□ -1.6
PAM18	YLR008C	CPS1	P27614	576 aa		5.07	□□□□□ -1.6
PAM18	YLR008C	YBL086C	P38177	466 aa		5.07	□□□□□ -1.6
PAM18	YLR008C	NAB3	P38996	802 aa	Known RBP RIP-Chip data	5.07	□□□□□ -1.6	RIP-Chip
PAM18	YLR008C	FPR4	Q06205	392 aa	Predicted RBP	5.07	□□□□□ -1.6
PAM18	YLR008C	GAR1	P28007	205 aa	Known RBP	5.06	□□□□□ -1.6
PAM18	YLR008C	FBP26	P32604	452 aa		5.06	□□□□□ -1.6
PAM18	YLR008C	NMD2	P38798	1089 aa	Known RBP	5.06	□□□□□ -1.6
PAM18	YLR008C	BRE2	P43132	505 aa		5.06	□□□□□ -1.6
PAM18	YLR008C	CWC22	P53333	577 aa	Known RBP	5.06	□□□□□ -1.6
PAM18	YLR008C	GCR2	Q01722	534 aa		5.06	□□□□□ -1.6
PAM18	YLR008C	DFG5	Q05031	458 aa		5.06	□□□□□ -1.6
PAM18	YLR008C	SRF1	Q12516	437 aa		5.06	□□□□□ -1.6
PAM18	YLR008C	HSL1	P34244	1518 aa		5.06	□□□□□ -1.6
PAM18	YLR008C	SPT6	P23615	1451 aa	Known RBP	5.06	□□□□□ -1.6
PAM18	YLR008C	CDC3	P32457	520 aa	Known RBP	5.05	□□□□□ -1.6
PAM18	YLR008C	TOA1	P32773	286 aa		5.05	□□□□□ -1.6
PAM18	YLR008C	APL6	P46682	809 aa		5.05	□□□□□ -1.6
PAM18	YLR008C	MSB3	P48566	633 aa	Predicted RBP	5.05	□□□□□ -1.6
PAM18	YLR008C	BDS1	Q08347	646 aa		5.05	□□□□□ -1.6
PAM18	YLR008C	HIF1	Q12373	385 aa		5.05	□□□□□ -1.6
PAM18	YLR008C	TOM20	P35180	183 aa		5.04	□□□□□ -1.6
PAM18	YLR008C	TTI1	P36097	1038 aa		5.04	□□□□□ -1.6
PAM18	YLR008C	HAL5	P38970	855 aa	Known RBP	5.04	□□□□□ -1.6
PAM18	YLR008C	YJR115W	P47152	169 aa		5.04	□□□□□ -1.6
PAM18	YLR008C	KIP3	P53086	805 aa	Known RBP	5.04	□□□□□ -1.6
PAM18	YLR008C	RPL34A	P87262	121 aa	Predicted RBP	5.04	□□□□□ -1.6
PAM18	YLR008C	ISU1	Q03020	165 aa		5.04	□□□□□ -1.6
PAM18	YLR008C	UTP13	Q05946	817 aa	Known RBP	5.04	□□□□□ -1.6
PAM18	YLR008C	MIP1	P15801	1254 aa		5.03	□□□□□ -1.6
PAM18	YLR008C	GBP2	P25555	427 aa	Known RBP RIP-Chip data	5.03	□□□□□ -1.6	not detected
PAM18	YLR008C	RTT106	P40161	455 aa		5.03	□□□□□ -1.6
PAM18	YLR008C	CHD1	P32657	1468 aa		5.02	□□□□□ -1.61
PAM18	YLR008C	DAT1	P13483	248 aa	Known RBP	5.02	□□□□□ -1.61
PAM18	YLR008C	UTR2	P32623	467 aa		5.02	□□□□□ -1.61
PAM18	YLR008C	ISW1	P38144	1129 aa		5.02	□□□□□ -1.61
PAM18	YLR008C	PMC1	P38929	1173 aa	Predicted RBP	5.02	□□□□□ -1.61
PAM18	YLR008C	AIM21	P40563	679 aa		5.02	□□□□□ -1.61
PAM18	YLR008C	PTK2	P47116	818 aa	Known RBP	5.02	□□□□□ -1.61
PAM18	YLR008C	NNF1	P47149	201 aa		5.02	□□□□□ -1.61
PAM18	YLR008C	RNH70	P53331	553 aa		5.02	□□□□□ -1.61
PAM18	YLR008C	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	5.02	□□□□□ -1.61	not detected
PAM18	YLR008C	RPP2B	P02400	110 aa	Known RBP	5.01	□□□□□ -1.61
PAM18	YLR008C	ARG82	P07250	355 aa		5.01	□□□□□ -1.61
PAM18	YLR008C	PEP12	P32854	288 aa		5.01	□□□□□ -1.61
PAM18	YLR008C	TY4A-J	P47023	414 aa		5.01	□□□□□ -1.61
PAM18	YLR008C	HDA3	Q06623	655 aa		5.01	□□□□□ -1.61
PAM18	YLR008C	NOB1	Q08444	459 aa	Known RBP	5.01	□□□□□ -1.61
PAM18	YLR008C	STE6	P12866	1290 aa		5	□□□□□ -1.61
PAM18	YLR008C	GAL11	P19659	1081 aa		5	□□□□□ -1.61
PAM18	YLR008C	TSR4	P25040	408 aa		5	□□□□□ -1.61
PAM18	YLR008C	TGL4	P36165	910 aa		5	□□□□□ -1.61
PAM18	YLR008C	TBS1	P38114	1094 aa		5	□□□□□ -1.61
PAM18	YLR008C	DLD3	P39976	496 aa	Known RBP	5	□□□□□ -1.61
PAM18	YLR008C	ALD2	P47771	506 aa		5	□□□□□ -1.61
PAM18	YLR008C	ECM23	Q02710	187 aa		5	□□□□□ -1.61
PAM18	YLR008C	HAT1	Q12341	374 aa		5	□□□□□ -1.61
PAM18	YLR008C	PDI1	P17967	522 aa	Known RBP	4.99	□□□□□ -1.61
PAM18	YLR008C	RPA135	P22138	1203 aa	Known RBP	4.99	□□□□□ -1.61
PAM18	YLR008C	EBP2	P36049	427 aa	Known RBP	4.99	□□□□□ -1.61
PAM18	YLR008C	IPL1	P38991	367 aa		4.99	□□□□□ -1.61
PAM18	YLR008C	AIM9	P40053	627 aa	Known RBP	4.99	□□□□□ -1.61
PAM18	YLR008C	AAD14	P42884	376 aa		4.99	□□□□□ -1.61
PAM18	YLR008C	BRE1	Q07457	700 aa	Known RBP	4.99	□□□□□ -1.61
PAM18	YLR008C	DLD1	P32891	587 aa		4.98	□□□□□ -1.61
PAM18	YLR008C	WTM2	Q12206	467 aa		4.98	□□□□□ -1.61
PAM18	YLR008C	SPT2	P06843	333 aa	Predicted RBP	4.97	□□□□□ -1.61
PAM18	YLR008C	GAL2	P13181	574 aa		4.97	□□□□□ -1.61
PAM18	YLR008C	PHO87	P25360	923 aa		4.97	□□□□□ -1.61
PAM18	YLR008C	TPM2	P40414	161 aa		4.97	□□□□□ -1.61
PAM18	YLR008C	YFL034W	P43564	1073 aa		4.97	□□□□□ -1.61
PAM18	YLR008C	RLP24	Q07915	199 aa	Known RBP	4.97	□□□□□ -1.61
PAM18	YLR008C	HIR3	P47171	1648 aa		4.97	□□□□□ -1.61
PAM18	YLR008C	SIN3	P22579	1536 aa		4.97	□□□□□ -1.61
PAM18	YLR008C	THO2	P53552	1597 aa	Known RBP	4.96	□□□□□ -1.62
PAM18	YLR008C	PUP1	P25043	261 aa		4.96	□□□□□ -1.62
PAM18	YLR008C	PPG1	P32838	368 aa		4.96	□□□□□ -1.62
PAM18	YLR008C	UTP7	P40055	554 aa	Known RBP	4.96	□□□□□ -1.62
PAM18	YLR008C	TSC13	Q99190	310 aa		4.96	□□□□□ -1.62
PAM18	YLR008C	XRN1	P22147	1528 aa	Known RBP	4.96	□□□□□ -1.62
PAM18	YLR008C	RAD2	P07276	1031 aa		4.95	□□□□□ -1.62
PAM18	YLR008C	HAP4	P14064	554 aa		4.95	□□□□□ -1.62
PAM18	YLR008C	NTH2	P35172	780 aa		4.95	□□□□□ -1.62
PAM18	YLR008C	MPE1	P35728	441 aa	Known RBP	4.95	□□□□□ -1.62
PAM18	YLR008C	RRP14	P36080	434 aa	Known RBP	4.95	□□□□□ -1.62
PAM18	YLR008C	UBX7	P38349	436 aa		4.95	□□□□□ -1.62
PAM18	YLR008C	NUP85	P46673	744 aa		4.95	□□□□□ -1.62
PAM18	YLR008C	ACS2	P52910	683 aa	Known RBP	4.95	□□□□□ -1.62
PAM18	YLR008C	LSC2	P53312	427 aa		4.95	□□□□□ -1.62
PAM18	YLR008C	YML083C	Q04526	418 aa		4.95	□□□□□ -1.62
PAM18	YLR008C	YOL057W	Q08225	711 aa		4.95	□□□□□ -1.62
PAM18	YLR008C	YOL098C	Q12496	1037 aa		4.95	□□□□□ -1.62
PAM18	YLR008C	SWI5	P08153	709 aa		4.94	□□□□□ -1.62
PAM18	YLR008C	RPS6A	P0CX37	236 aa	Known RBP	4.94	□□□□□ -1.62
PAM18	YLR008C	RPS6B	P0CX38	236 aa	Predicted RBP	4.94	□□□□□ -1.62
PAM18	YLR008C	RPT2	P40327	437 aa	Known RBP	4.94	□□□□□ -1.62
PAM18	YLR008C	GIR2	Q03768	265 aa	Predicted RBP	4.94	□□□□□ -1.62
PAM18	YLR008C	YLR346C	Q06139	101 aa		4.94	□□□□□ -1.62
PAM18	YLR008C	YDL121C	Q07541	149 aa		4.94	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms