RNA–Protein interactions for RNA: YJL140W

RPB4, Transcript of RNA polymerase II subunit B32, yeastyeast

Gene RPB4, Length 666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB4YJL140W RGA1P39083 1007 aa7.95□□□□□ -1.14
RPB4YJL140W PKH3Q03306 898 aaPredicted RBP7.94□□□□□ -1.14
RPB4YJL140W GAR1P28007 205 aaKnown RBP7.93□□□□□ -1.14
RPB4YJL140W YJU3P28321 313 aa7.93□□□□□ -1.14
RPB4YJL140W ASH1P34233 588 aa7.93□□□□□ -1.14
RPB4YJL140W RSC30P38781 883 aa7.93□□□□□ -1.14
RPB4YJL140W SYH1Q02875 849 aaKnown RBP7.92□□□□□ -1.14
RPB4YJL140W MET32Q12041 191 aa7.92□□□□□ -1.14
RPB4YJL140W HST3P53687 447 aa7.91□□□□□ -1.14
RPB4YJL140W PDR15Q04182 1529 aaKnown RBP7.91□□□□□ -1.14
RPB4YJL140W CHC1P22137 1653 aaKnown RBP7.9□□□□□ -1.14
RPB4YJL140W ARG8P18544 423 aa7.9□□□□□ -1.14
RPB4YJL140W GBP2P25555 427 aaKnown RBP RIP-Chip data7.9□□□□□ -1.14not detected
RPB4YJL140W ARO1P08566 1588 aaKnown RBP7.88□□□□□ -1.15
RPB4YJL140W AFT1P22149 690 aa7.87□□□□□ -1.15
RPB4YJL140W RAD59Q12223 238 aa7.87□□□□□ -1.15
RPB4YJL140W KIP2P28743 706 aa7.86□□□□□ -1.15
RPB4YJL140W DNF3Q12674 1656 aa7.86□□□□□ -1.15
RPB4YJL140W MET22P32179 357 aa7.85□□□□□ -1.15
RPB4YJL140W GUA1P38625 525 aaKnown RBP7.85□□□□□ -1.15
RPB4YJL140W IXR1P33417 597 aa7.84□□□□□ -1.15
RPB4YJL140W HPC2Q01448 625 aa7.84□□□□□ -1.15
RPB4YJL140W YPL062WQ02781 134 aa7.82□□□□□ -1.16
RPB4YJL140W VAC17P25591 423 aa7.81□□□□□ -1.16
RPB4YJL140W TAF7Q05021 590 aa7.81□□□□□ -1.16
RPB4YJL140W ENV9Q08651 330 aa7.81□□□□□ -1.16
RPB4YJL140W YJR115WP47152 169 aa7.79□□□□□ -1.16
RPB4YJL140W YDR444WQ04093 687 aa7.79□□□□□ -1.16
RPB4YJL140W RGA2Q06407 1009 aa7.79□□□□□ -1.16
RPB4YJL140W MRT4P33201 236 aaKnown RBP7.78□□□□□ -1.16
RPB4YJL140W CSE4P36012 229 aa7.78□□□□□ -1.16
RPB4YJL140W LEO1P38439 464 aa7.78□□□□□ -1.16
RPB4YJL140W BRL1P38770 471 aa7.78□□□□□ -1.16
RPB4YJL140W MSB3P48566 633 aaPredicted RBP7.78□□□□□ -1.16
RPB4YJL140W CAT8P39113 1433 aa7.78□□□□□ -1.16
RPB4YJL140W MAK16P10962 306 aaPredicted RBP7.77□□□□□ -1.17
RPB4YJL140W YAP3P38749 330 aa7.77□□□□□ -1.17
RPB4YJL140W NAF1P53919 492 aaKnown RBP7.75□□□□□ -1.17
RPB4YJL140W TY3B-GQ99315 1547 aa7.74□□□□□ -1.17
RPB4YJL140W UGA3P26370 528 aa7.74□□□□□ -1.17
RPB4YJL140W SEC7P11075 2009 aaKnown RBP7.74□□□□□ -1.17
RPB4YJL140W TEC1P18412 486 aa7.73□□□□□ -1.17
RPB4YJL140W FIG4P42837 879 aa7.73□□□□□ -1.17
RPB4YJL140W BNR1P40450 1375 aa7.72□□□□□ -1.17
RPB4YJL140W GEA1P47102 1408 aaPredicted RBP7.72□□□□□ -1.17
RPB4YJL140W HGH1P48362 394 aaKnown RBP7.72□□□□□ -1.17
RPB4YJL140W MAK10Q02197 733 aa7.72□□□□□ -1.17
RPB4YJL140W LCB5Q06147 687 aaKnown RBP7.72□□□□□ -1.17
RPB4YJL140W YBT1P32386 1661 aa7.72□□□□□ -1.17
RPB4YJL140W SPT5P27692 1063 aaKnown RBP7.71□□□□□ -1.18
RPB4YJL140W TFB3Q03290 321 aa7.71□□□□□ -1.18
RPB4YJL140W YBL036CP38197 257 aa7.7□□□□□ -1.18
RPB4YJL140W SRF1Q12516 437 aa7.7□□□□□ -1.18
RPB4YJL140W YSP2Q06681 1438 aa7.69□□□□□ -1.18
RPB4YJL140W GUT2P32191 649 aa7.69□□□□□ -1.18
RPB4YJL140W EMW1P42842 904 aaKnown RBP7.69□□□□□ -1.18
RPB4YJL140W URN1Q06525 465 aaKnown RBP7.69□□□□□ -1.18
RPB4YJL140W YBL086CP38177 466 aa7.67□□□□□ -1.18
RPB4YJL140W PTK2P47116 818 aaKnown RBP7.67□□□□□ -1.18
RPB4YJL140W YPR084WQ06821 456 aa7.66□□□□□ -1.18
RPB4YJL140W USO1P25386 1790 aa7.64□□□□□ -1.19
RPB4YJL140W MRX12P47084 519 aa7.64□□□□□ -1.19
RPB4YJL140W STE20Q03497 939 aaKnown RBP7.64□□□□□ -1.19
RPB4YJL140W YLR346CQ06139 101 aa7.64□□□□□ -1.19
RPB4YJL140W FRA1Q07825 749 aa7.64□□□□□ -1.19
RPB4YJL140W ARG82P07250 355 aa7.63□□□□□ -1.19
RPB4YJL140W APP1P53933 587 aa7.63□□□□□ -1.19
RPB4YJL140W PKC1P24583 1151 aa7.62□□□□□ -1.19
RPB4YJL140W NUP85P46673 744 aa7.62□□□□□ -1.19
RPB4YJL140W OPT2Q06593 877 aa7.61□□□□□ -1.19
RPB4YJL140W YDL176WQ12027 708 aa7.61□□□□□ -1.19
RPB4YJL140W MKS1P34072 584 aa7.6□□□□□ -1.19
RPB4YJL140W YPP1P46951 817 aa7.6□□□□□ -1.19
RPB4YJL140W FBP26P32604 452 aa7.58□□□□□ -1.2
RPB4YJL140W AAD14P42884 376 aa7.58□□□□□ -1.2
RPB4YJL140W ATG20Q07528 640 aa7.57□□□□□ -1.2
RPB4YJL140W MCM16Q12262 181 aa7.57□□□□□ -1.2
RPB4YJL140W IML1P47170 1584 aa7.57□□□□□ -1.2
RPB4YJL140W SRB8P25648 1427 aa7.56□□□□□ -1.2
RPB4YJL140W RPP2BP02400 110 aaKnown RBP7.56□□□□□ -1.2
RPB4YJL140W YDJ1P25491 409 aaKnown RBP7.56□□□□□ -1.2
RPB4YJL140W CAF120P53836 1060 aa7.56□□□□□ -1.2
RPB4YJL140W BDS1Q08347 646 aa7.56□□□□□ -1.2
RPB4YJL140W TY1B-NL2Q99337 1749 aaKnown RBP7.55□□□□□ -1.2
RPB4YJL140W SUP45P12385 437 aaKnown RBP7.55□□□□□ -1.2
RPB4YJL140W THI12P42883 340 aa7.55□□□□□ -1.2
RPB4YJL140W THI5P43534 340 aa7.55□□□□□ -1.2
RPB4YJL140W EMP47P43555 445 aa7.55□□□□□ -1.2
RPB4YJL140W THI11P47183 340 aa7.55□□□□□ -1.2
RPB4YJL140W LSC2P53312 427 aa7.55□□□□□ -1.2
RPB4YJL140W THI13Q07748 340 aa7.55□□□□□ -1.2
RPB4YJL140W HAP1P0CE41 1502 aa7.54□□□□□ -1.2
RPB4YJL140W STE6P12866 1290 aa7.54□□□□□ -1.2
RPB4YJL140W BIO2P32451 375 aa7.54□□□□□ -1.2
RPB4YJL140W IPL1P38991 367 aa7.54□□□□□ -1.2
RPB4YJL140W ATG3P40344 310 aa7.54□□□□□ -1.2
RPB4YJL140W DFG5Q05031 458 aa7.54□□□□□ -1.2
RPB4YJL140W MIP1P15801 1254 aa7.53□□□□□ -1.2
RPB4YJL140W GLY1P37303 387 aaKnown RBP7.53□□□□□ -1.2
RPB4YJL140W YJL007CP47080 104 aa7.53□□□□□ -1.2
Retrieved 100 of 5,963 RNA–protein pairs in 31.9 ms