RNA–Protein interactions for RNA: YGR100W

MDR1, Transcript of Cytoplasmic GTPase-activating protein, yeastyeast

Gene MDR1, Length 2,853 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MDR1YGR100W RFC5P38251 354 aa5.18□□□□□ -1.58
MDR1YGR100W BDH2P39713 417 aa5.18□□□□□ -1.58
MDR1YGR100W CTI6Q08923 506 aa5.18□□□□□ -1.58
MDR1YGR100W HSP104P31539 908 aaKnown RBP5.18□□□□□ -1.58
MDR1YGR100W TAF5P38129 798 aa5.18□□□□□ -1.58
MDR1YGR100W BRN1P38170 754 aa5.18□□□□□ -1.58
MDR1YGR100W RSM25P40496 264 aa5.18□□□□□ -1.58
MDR1YGR100W PSK1P31374 1356 aa5.18□□□□□ -1.58
MDR1YGR100W MRC1P25588 1096 aa5.18□□□□□ -1.58
MDR1YGR100W UBP14P38237 781 aaKnown RBP5.18□□□□□ -1.58
MDR1YGR100W HOS4P40480 1083 aa5.18□□□□□ -1.58
MDR1YGR100W YRB1P41920 201 aaKnown RBP5.18□□□□□ -1.58
MDR1YGR100W SAP155P43612 1002 aa5.18□□□□□ -1.58
MDR1YGR100W RRB1Q04225 511 aaKnown RBP5.18□□□□□ -1.58
MDR1YGR100W RTG3P38165 486 aa5.17□□□□□ -1.58
MDR1YGR100W RIO2P40160 425 aaKnown RBP5.17□□□□□ -1.58
MDR1YGR100W ALD2P47771 506 aa5.17□□□□□ -1.58
MDR1YGR100W JJJ1P53863 590 aa5.17□□□□□ -1.58
MDR1YGR100W SRC1Q03707 834 aa5.17□□□□□ -1.58
MDR1YGR100W DLD1P32891 587 aa5.17□□□□□ -1.58
MDR1YGR100W HST1P53685 503 aa5.17□□□□□ -1.58
MDR1YGR100W HRQ1Q05549 1077 aa5.17□□□□□ -1.58
MDR1YGR100W TY3B-IQ7LHG5 1498 aaKnown RBP5.16□□□□□ -1.58
MDR1YGR100W RAD16P31244 790 aa5.16□□□□□ -1.58
MDR1YGR100W RGD1P38339 666 aa5.16□□□□□ -1.58
MDR1YGR100W CLF1Q12309 687 aaPredicted RBP5.16□□□□□ -1.58
MDR1YGR100W NAB3P38996 802 aaKnown RBP RIP-Chip data5.16□□□□□ -1.58not detected
MDR1YGR100W SEC23P15303 768 aaKnown RBP5.15□□□□□ -1.58
MDR1YGR100W RPL5P26321 297 aaKnown RBP5.15□□□□□ -1.58
MDR1YGR100W SEC66P33754 206 aa5.15□□□□□ -1.58
MDR1YGR100W PTH2P34222 208 aa5.15□□□□□ -1.58
MDR1YGR100W MSH6Q03834 1242 aa5.15□□□□□ -1.58
MDR1YGR100W RAD50P12753 1312 aa5.15□□□□□ -1.58
MDR1YGR100W CDC60P26637 1090 aaKnown RBP5.15□□□□□ -1.59
MDR1YGR100W TPD3P31383 635 aa5.15□□□□□ -1.59
MDR1YGR100W RME1P32338 300 aaKnown RBP5.15□□□□□ -1.59
MDR1YGR100W OSW7P43611 510 aa5.15□□□□□ -1.59
MDR1YGR100W RTC1Q08281 1341 aa5.15□□□□□ -1.59
MDR1YGR100W MPE1P35728 441 aaKnown RBP5.14□□□□□ -1.59
MDR1YGR100W HEL1P36113 551 aa5.14□□□□□ -1.59
MDR1YGR100W JSN1P47135 1091 aaKnown RBP RIP-Chip data5.14□□□□□ -1.59not detected
MDR1YGR100W PKH1Q03407 766 aa5.14□□□□□ -1.59
MDR1YGR100W ARO1P08566 1588 aaKnown RBP5.14□□□□□ -1.59
MDR1YGR100W KEX1P09620 729 aa5.14□□□□□ -1.59
MDR1YGR100W BIK1P11709 440 aa5.14□□□□□ -1.59
MDR1YGR100W HSC82P15108 705 aaKnown RBP5.14□□□□□ -1.59
MDR1YGR100W YEF3P16521 1044 aaKnown RBP5.14□□□□□ -1.59
MDR1YGR100W CSE4P36012 229 aa5.14□□□□□ -1.59
MDR1YGR100W MVP1P40959 511 aaKnown RBP5.14□□□□□ -1.59
MDR1YGR100W SUM1P46676 1062 aa5.14□□□□□ -1.59
MDR1YGR100W YML119WQ03208 357 aa5.14□□□□□ -1.59
MDR1YGR100W KRE28Q04431 385 aa5.14□□□□□ -1.59
MDR1YGR100W LSO1Q3E827 93 aa5.14□□□□□ -1.59
MDR1YGR100W YBT1P32386 1661 aa5.14□□□□□ -1.59
MDR1YGR100W ATG2P53855 1592 aa5.14□□□□□ -1.59
MDR1YGR100W SEC20P28791 383 aa5.14□□□□□ -1.59
MDR1YGR100W YEL1P34225 687 aa5.14□□□□□ -1.59
MDR1YGR100W RTF1P53064 558 aa5.14□□□□□ -1.59
MDR1YGR100W YDR338CQ05497 695 aa5.14□□□□□ -1.59
MDR1YGR100W TFB4Q12004 338 aa5.14□□□□□ -1.59
MDR1YGR100W NKP1Q12493 238 aa5.14□□□□□ -1.59
MDR1YGR100W ERC1P38767 581 aa5.13□□□□□ -1.59
MDR1YGR100W HXT13P39924 564 aa5.13□□□□□ -1.59
MDR1YGR100W CTK3P46963 296 aaPredicted RBP5.13□□□□□ -1.59
MDR1YGR100W SDH5Q08230 162 aa5.13□□□□□ -1.59
MDR1YGR100W TRS33Q99394 268 aa5.13□□□□□ -1.59
MDR1YGR100W RPO31P04051 1460 aa5.13□□□□□ -1.59
MDR1YGR100W RRP1P35178 278 aaPredicted RBP5.13□□□□□ -1.59
MDR1YGR100W ATG26Q06321 1198 aa5.13□□□□□ -1.59
MDR1YGR100W IOC2Q12072 812 aa5.13□□□□□ -1.59
MDR1YGR100W PDR18P53756 1333 aa5.13□□□□□ -1.59
MDR1YGR100W RPL17AP05740 184 aaKnown RBP5.12□□□□□ -1.59
MDR1YGR100W CDC3P32457 520 aaKnown RBP5.12□□□□□ -1.59
MDR1YGR100W UBP13P38187 747 aa5.12□□□□□ -1.59
MDR1YGR100W ILV3P39522 585 aaKnown RBP5.12□□□□□ -1.59
MDR1YGR100W BUD27P43573 796 aaKnown RBP RIP-Chip data5.12□□□□□ -1.59not detected
MDR1YGR100W CTH1P47976 325 aa5.12□□□□□ -1.59
MDR1YGR100W HST2P53686 357 aa5.12□□□□□ -1.59
MDR1YGR100W HAP1P0CE41 1502 aa5.12□□□□□ -1.59
MDR1YGR100W EXO84P38261 753 aa5.12□□□□□ -1.59
MDR1YGR100W RTR1P40084 226 aaPredicted RBP5.12□□□□□ -1.59
MDR1YGR100W CKB1P43639 278 aa5.12□□□□□ -1.59
MDR1YGR100W COG4Q06096 861 aa5.12□□□□□ -1.59
MDR1YGR100W LCB5Q06147 687 aaKnown RBP5.12□□□□□ -1.59
MDR1YGR100W NKP2Q06162 153 aa5.12□□□□□ -1.59
MDR1YGR100W TAF1P46677 1066 aa5.11□□□□□ -1.59
MDR1YGR100W RRP46P53256 223 aaPredicted RBP5.11□□□□□ -1.59
MDR1YGR100W HXT17P53631 564 aa5.11□□□□□ -1.59
MDR1YGR100W IST1P53843 298 aaPredicted RBP5.11□□□□□ -1.59
MDR1YGR100W CMS1Q07897 291 aaKnown RBP5.11□□□□□ -1.59
MDR1YGR100W CDC37P06101 506 aaKnown RBP5.11□□□□□ -1.59
MDR1YGR100W BNI4P53858 892 aa5.11□□□□□ -1.59
MDR1YGR100W YDR341CQ05506 607 aaKnown RBP5.11□□□□□ -1.59
MDR1YGR100W TFC8Q12308 588 aa5.11□□□□□ -1.59
MDR1YGR100W CDC25P04821 1589 aa5.11□□□□□ -1.59
MDR1YGR100W PET123P17558 318 aa5.1□□□□□ -1.59
MDR1YGR100W MRPS28P21771 286 aa5.1□□□□□ -1.59
MDR1YGR100W SSA4P22202 642 aaKnown RBP5.1□□□□□ -1.59
MDR1YGR100W KAR9P32526 644 aa5.1□□□□□ -1.59
MDR1YGR100W YFR006WP43590 535 aa5.1□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 8.9 ms