RNA–Protein interactions for RNA: YDL166C

FAP7, Transcript of Essential NTPase required for small ribosome subunit synthesis, yeast

Gene FAP7, Length 594 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FAP7	YDL166C	VAS1	P07806	1104 aa	Known RBP	3.96	□□□□□ -1.78
FAP7	YDL166C	RNA1	P11745	407 aa	Known RBP	3.96	□□□□□ -1.78
FAP7	YDL166C	RPN12	P32496	274 aa		3.96	□□□□□ -1.78
FAP7	YDL166C	RPN1	P38764	993 aa	Known RBP	3.96	□□□□□ -1.78
FAP7	YDL166C	UBP9	P39967	754 aa		3.96	□□□□□ -1.78
FAP7	YDL166C	VHR2	P40041	505 aa		3.96	□□□□□ -1.78
FAP7	YDL166C	RRT14	P40470	206 aa		3.96	□□□□□ -1.78
FAP7	YDL166C	REF2	P42073	533 aa	Predicted RBP	3.96	□□□□□ -1.78
FAP7	YDL166C	KRI1	P42846	591 aa	Known RBP	3.96	□□□□□ -1.78
FAP7	YDL166C	SMC3	P47037	1230 aa		3.96	□□□□□ -1.78
FAP7	YDL166C	YNL050C	P53952	270 aa		3.96	□□□□□ -1.78
FAP7	YDL166C	RCM1	P53972	490 aa		3.96	□□□□□ -1.78
FAP7	YDL166C	HOS3	Q02959	697 aa	Known RBP	3.96	□□□□□ -1.78
FAP7	YDL166C	YDR090C	Q03193	310 aa		3.96	□□□□□ -1.78
FAP7	YDL166C	YLR326W	Q06170	240 aa	Known RBP	3.96	□□□□□ -1.78
FAP7	YDL166C	RPO41	P13433	1351 aa	Known RBP	3.95	□□□□□ -1.78
FAP7	YDL166C	HTA1	P04911	132 aa	Known RBP	3.95	□□□□□ -1.78
FAP7	YDL166C	HTA2	P04912	132 aa		3.95	□□□□□ -1.78
FAP7	YDL166C	PBS2	P08018	668 aa		3.95	□□□□□ -1.78
FAP7	YDL166C	CYC8	P14922	966 aa		3.95	□□□□□ -1.78
FAP7	YDL166C	RKM3	P38222	552 aa		3.95	□□□□□ -1.78
FAP7	YDL166C	HYR1	P40581	163 aa	Known RBP	3.95	□□□□□ -1.78
FAP7	YDL166C	ULI1	P43604	169 aa		3.95	□□□□□ -1.78
FAP7	YDL166C	STU2	P46675	888 aa		3.95	□□□□□ -1.78
FAP7	YDL166C	SPP1	Q03012	353 aa		3.95	□□□□□ -1.78
FAP7	YDL166C	VPS20	Q04272	221 aa		3.95	□□□□□ -1.78
FAP7	YDL166C	BNI1	P41832	1953 aa		3.94	□□□□□ -1.78
FAP7	YDL166C	TPM1	P17536	199 aa	Known RBP	3.94	□□□□□ -1.78
FAP7	YDL166C	LTV1	P34078	463 aa		3.94	□□□□□ -1.78
FAP7	YDL166C	AKL1	P38080	1108 aa	Known RBP	3.94	□□□□□ -1.78
FAP7	YDL166C	BRN1	P38170	754 aa		3.94	□□□□□ -1.78
FAP7	YDL166C	DSF2	P38213	736 aa		3.94	□□□□□ -1.78
FAP7	YDL166C	RVS167	P39743	482 aa	Known RBP	3.94	□□□□□ -1.78
FAP7	YDL166C	PEX14	P53112	341 aa		3.94	□□□□□ -1.78
FAP7	YDL166C	YGR130C	P53278	816 aa		3.94	□□□□□ -1.78
FAP7	YDL166C	SPO1	P53541	631 aa		3.94	□□□□□ -1.78
FAP7	YDL166C	SRT1	Q03175	343 aa		3.94	□□□□□ -1.78
FAP7	YDL166C	GAS4	Q08271	471 aa		3.94	□□□□□ -1.78
FAP7	YDL166C	SFI1	Q12369	946 aa		3.94	□□□□□ -1.78
FAP7	YDL166C	DPS1	P04802	557 aa	Known RBP	3.93	□□□□□ -1.78
FAP7	YDL166C	MCM2	P29469	868 aa		3.93	□□□□□ -1.78
FAP7	YDL166C	YEL023C	P39992	682 aa		3.93	□□□□□ -1.78
FAP7	YDL166C	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	3.93	□□□□□ -1.78	not detected
FAP7	YDL166C	CIR1	P42940	261 aa		3.93	□□□□□ -1.78
FAP7	YDL166C	BDP1	P46678	594 aa		3.93	□□□□□ -1.78
FAP7	YDL166C	DAN4	P47179	1161 aa		3.93	□□□□□ -1.78
FAP7	YDL166C	HGH1	P48362	394 aa	Known RBP	3.93	□□□□□ -1.78
FAP7	YDL166C	DSD1	P53095	428 aa		3.93	□□□□□ -1.78
FAP7	YDL166C	RIA1	P53893	1110 aa		3.93	□□□□□ -1.78
FAP7	YDL166C	VPS60	Q03390	229 aa		3.93	□□□□□ -1.78
FAP7	YDL166C	CSI1	Q04368	295 aa		3.93	□□□□□ -1.78
FAP7	YDL166C	FPR4	Q06205	392 aa	Predicted RBP	3.93	□□□□□ -1.78
FAP7	YDL166C	APC11	Q12157	165 aa		3.93	□□□□□ -1.78
FAP7	YDL166C	ROM2	P51862	1356 aa	Known RBP	3.92	□□□□□ -1.78
FAP7	YDL166C	RPS19A	P07280	144 aa	Known RBP	3.92	□□□□□ -1.78
FAP7	YDL166C	RPS19B	P07281	144 aa	Predicted RBP	3.92	□□□□□ -1.78
FAP7	YDL166C	MPH3	P0CE00	602 aa		3.92	□□□□□ -1.78
FAP7	YDL166C	SPB4	P25808	606 aa	Predicted RBP	3.92	□□□□□ -1.78
FAP7	YDL166C	PPH3	P32345	308 aa		3.92	□□□□□ -1.78
FAP7	YDL166C	MRPL10	P36520	322 aa		3.92	□□□□□ -1.78
FAP7	YDL166C	PCS60	P38137	543 aa	Known RBP RIP-Chip data	3.92	□□□□□ -1.78	not detected
FAP7	YDL166C	PBY1	P38254	753 aa		3.92	□□□□□ -1.78
FAP7	YDL166C	YBR287W	P38355	427 aa		3.92	□□□□□ -1.78
FAP7	YDL166C	CCT5	P40413	562 aa	Known RBP	3.92	□□□□□ -1.78
FAP7	YDL166C	CEP3	P40969	608 aa		3.92	□□□□□ -1.78
FAP7	YDL166C	NPA3	P47122	385 aa		3.92	□□□□□ -1.78
FAP7	YDL166C	NSE3	Q05541	303 aa		3.92	□□□□□ -1.78
FAP7	YDL166C	HRQ1	Q05549	1077 aa		3.92	□□□□□ -1.78
FAP7	YDL166C	LDB19	Q12502	818 aa		3.92	□□□□□ -1.78
FAP7	YDL166C	CDC16	P09798	840 aa		3.91	□□□□□ -1.78
FAP7	YDL166C	RPL19A	P0CX82	189 aa	Known RBP	3.91	□□□□□ -1.78
FAP7	YDL166C	RPL19B	P0CX83	189 aa	Predicted RBP	3.91	□□□□□ -1.78
FAP7	YDL166C	CPS1	P27614	576 aa		3.91	□□□□□ -1.78
FAP7	YDL166C	MFT1	P33441	392 aa	Known RBP	3.91	□□□□□ -1.78
FAP7	YDL166C	EAP1	P36041	632 aa	Known RBP	3.91	□□□□□ -1.78
FAP7	YDL166C	TTI1	P36097	1038 aa		3.91	□□□□□ -1.78
FAP7	YDL166C	DID4	P36108	232 aa		3.91	□□□□□ -1.78
FAP7	YDL166C	CIN4	P39110	191 aa		3.91	□□□□□ -1.78
FAP7	YDL166C	HXT13	P39924	564 aa		3.91	□□□□□ -1.78
FAP7	YDL166C	APC1	P53886	1748 aa		3.91	□□□□□ -1.78
FAP7	YDL166C	RNT1	Q02555	471 aa		3.91	□□□□□ -1.78
FAP7	YDL166C	AOS1	Q06624	347 aa		3.91	□□□□□ -1.78
FAP7	YDL166C	BMS1	Q08965	1183 aa	Known RBP	3.91	□□□□□ -1.78
FAP7	YDL166C	NCB2	Q92317	146 aa		3.91	□□□□□ -1.78
FAP7	YDL166C	AUS1	Q08409	1394 aa		3.9	□□□□□ -1.78
FAP7	YDL166C	COX6	P00427	148 aa		3.9	□□□□□ -1.79
FAP7	YDL166C	AI4	P03878	556 aa		3.9	□□□□□ -1.79
FAP7	YDL166C	RPS24A	P0CX31	135 aa	Known RBP	3.9	□□□□□ -1.79
FAP7	YDL166C	RPS24B	P0CX32	135 aa	Known RBP	3.9	□□□□□ -1.79
FAP7	YDL166C	CLB1	P24868	471 aa		3.9	□□□□□ -1.79
FAP7	YDL166C	DEP1	P31385	405 aa		3.9	□□□□□ -1.79
FAP7	YDL166C	SPC110	P32380	944 aa		3.9	□□□□□ -1.79
FAP7	YDL166C	NTH2	P35172	780 aa		3.9	□□□□□ -1.79
FAP7	YDL166C	MPE1	P35728	441 aa	Known RBP	3.9	□□□□□ -1.79
FAP7	YDL166C	RAD26	P40352	1085 aa		3.9	□□□□□ -1.79
FAP7	YDL166C	TFG2	P41896	400 aa	Predicted RBP	3.9	□□□□□ -1.79
FAP7	YDL166C	NUP42	P49686	430 aa	Known RBP	3.9	□□□□□ -1.79
FAP7	YDL166C	CWH41	P53008	833 aa		3.9	□□□□□ -1.79
FAP7	YDL166C	TIM50	Q02776	476 aa		3.9	□□□□□ -1.79
FAP7	YDL166C	PEX19	Q07418	342 aa		3.9	□□□□□ -1.79

Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms