RNA–Protein interactions for RNA: YDL139C

SCM3, Transcript of Nonhistone component of centromeric chromatin, yeastyeast

Gene SCM3, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCM3YDL139C RPA14P50106 137 aa7.39□□□□□ -1.23
SCM3YDL139C HPC2Q01448 625 aa7.39□□□□□ -1.23
SCM3YDL139C GCN2P15442 1659 aa7.38□□□□□ -1.23
SCM3YDL139C CDC4P07834 779 aa7.38□□□□□ -1.23
SCM3YDL139C MET10P39692 1035 aa7.38□□□□□ -1.23
SCM3YDL139C RRD1P40454 393 aaKnown RBP7.38□□□□□ -1.23
SCM3YDL139C BUB1P41695 1021 aaKnown RBP RIP-Chip data7.38□□□□□ -1.23not detected
SCM3YDL139C ALR1Q08269 859 aa7.38□□□□□ -1.23
SCM3YDL139C SEC7P11075 2009 aaKnown RBP7.37□□□□□ -1.23
SCM3YDL139C SRB8P25648 1427 aa7.37□□□□□ -1.23
SCM3YDL139C TFB3Q03290 321 aa7.37□□□□□ -1.23
SCM3YDL139C DNF2Q12675 1612 aa7.37□□□□□ -1.23
SCM3YDL139C PDR11P40550 1411 aa7.36□□□□□ -1.23
SCM3YDL139C TPD3P31383 635 aa7.36□□□□□ -1.23
SCM3YDL139C YPR097WQ06839 1073 aa7.36□□□□□ -1.23
SCM3YDL139C LTE1P07866 1435 aa7.35□□□□□ -1.23
SCM3YDL139C ARG8P18544 423 aa7.35□□□□□ -1.23
SCM3YDL139C HGH1P48362 394 aaKnown RBP7.35□□□□□ -1.23
SCM3YDL139C MET32Q12041 191 aa7.35□□□□□ -1.23
SCM3YDL139C RSC30P38781 883 aa7.34□□□□□ -1.23
SCM3YDL139C RLF2Q12495 606 aa7.34□□□□□ -1.23
SCM3YDL139C BRE2P43132 505 aa7.33□□□□□ -1.24
SCM3YDL139C SSA2P10592 639 aaKnown RBP7.32□□□□□ -1.24
SCM3YDL139C KIP2P28743 706 aa7.32□□□□□ -1.24
SCM3YDL139C ITT1Q04638 464 aa7.32□□□□□ -1.24
SCM3YDL139C NUP192P47054 1683 aa7.32□□□□□ -1.24
SCM3YDL139C PKC1P24583 1151 aa7.31□□□□□ -1.24
SCM3YDL139C ASH1P34233 588 aa7.31□□□□□ -1.24
SCM3YDL139C SYH1Q02875 849 aaKnown RBP7.31□□□□□ -1.24
SCM3YDL139C RAD59Q12223 238 aa7.31□□□□□ -1.24
SCM3YDL139C PDR5P33302 1511 aaKnown RBP7.31□□□□□ -1.24
SCM3YDL139C BRL1P38770 471 aa7.3□□□□□ -1.24
SCM3YDL139C NUP188P52593 1655 aaKnown RBP7.3□□□□□ -1.24
SCM3YDL139C GCR2Q01722 534 aa7.29□□□□□ -1.24
SCM3YDL139C IXR1P33417 597 aa7.28□□□□□ -1.24
SCM3YDL139C HST3P53687 447 aa7.28□□□□□ -1.24
SCM3YDL139C AFT1P22149 690 aa7.26□□□□□ -1.25
SCM3YDL139C BNR1P40450 1375 aa7.25□□□□□ -1.25
SCM3YDL139C DRS2P39524 1355 aa7.24□□□□□ -1.25
SCM3YDL139C VAC17P25591 423 aa7.23□□□□□ -1.25
SCM3YDL139C IML1P47170 1584 aa7.22□□□□□ -1.25
SCM3YDL139C MMS1Q06211 1407 aa7.21□□□□□ -1.25
SCM3YDL139C TRM3Q07527 1436 aa7.21□□□□□ -1.25
SCM3YDL139C YJL007CP47080 104 aa7.2□□□□□ -1.26
SCM3YDL139C YJR115WP47152 169 aa7.2□□□□□ -1.26
SCM3YDL139C GAR1P28007 205 aaKnown RBP7.19□□□□□ -1.26
SCM3YDL139C BIM1P40013 344 aa7.19□□□□□ -1.26
SCM3YDL139C FIG4P42837 879 aa7.19□□□□□ -1.26
SCM3YDL139C UGA3P26370 528 aa7.18□□□□□ -1.26
SCM3YDL139C APP1P53933 587 aa7.18□□□□□ -1.26
SCM3YDL139C BUD21Q08492 214 aaPredicted RBP7.18□□□□□ -1.26
SCM3YDL139C DNF3Q12674 1656 aa7.17□□□□□ -1.26
SCM3YDL139C MET22P32179 357 aa7.17□□□□□ -1.26
SCM3YDL139C MRT4P33201 236 aaKnown RBP7.17□□□□□ -1.26
SCM3YDL139C ATG32P40458 529 aa7.17□□□□□ -1.26
SCM3YDL139C YBL036CP38197 257 aa7.16□□□□□ -1.26
SCM3YDL139C MSB3P48566 633 aaPredicted RBP7.16□□□□□ -1.26
SCM3YDL139C MAK16P10962 306 aaPredicted RBP7.15□□□□□ -1.26
SCM3YDL139C BIO2P32451 375 aa7.15□□□□□ -1.26
SCM3YDL139C TEC1P18412 486 aa7.14□□□□□ -1.27
SCM3YDL139C TYS1P36421 394 aaKnown RBP7.14□□□□□ -1.27
SCM3YDL139C GBP2P25555 427 aaKnown RBP RIP-Chip data7.12□□□□□ -1.27not detected
SCM3YDL139C PTK2P47116 818 aaKnown RBP7.12□□□□□ -1.27
SCM3YDL139C ENV9Q08651 330 aa7.12□□□□□ -1.27
SCM3YDL139C SRF1Q12516 437 aa7.12□□□□□ -1.27
SCM3YDL139C USO1P25386 1790 aa7.11□□□□□ -1.27
SCM3YDL139C YDR444WQ04093 687 aa7.11□□□□□ -1.27
SCM3YDL139C EMW1P42842 904 aaKnown RBP7.1□□□□□ -1.27
SCM3YDL139C YPR084WQ06821 456 aa7.1□□□□□ -1.27
SCM3YDL139C TIF1P10081 395 aaKnown RBP7.09□□□□□ -1.27
SCM3YDL139C CSE4P36012 229 aa7.09□□□□□ -1.27
SCM3YDL139C YBL086CP38177 466 aa7.09□□□□□ -1.27
SCM3YDL139C RPL34BP40525 121 aaKnown RBP7.08□□□□□ -1.28
SCM3YDL139C YNL108CP53929 270 aa7.08□□□□□ -1.28
SCM3YDL139C ORC1P54784 914 aaPredicted RBP7.08□□□□□ -1.28
SCM3YDL139C RAV1P47104 1357 aa7.08□□□□□ -1.28
SCM3YDL139C GUT2P32191 649 aa7.07□□□□□ -1.28
SCM3YDL139C LCB5Q06147 687 aaKnown RBP7.07□□□□□ -1.28
SCM3YDL139C TY3B-IQ7LHG5 1498 aaKnown RBP7.06□□□□□ -1.28
SCM3YDL139C MKS1P34072 584 aa7.06□□□□□ -1.28
SCM3YDL139C NAF1P53919 492 aaKnown RBP7.06□□□□□ -1.28
SCM3YDL139C YDJ1P25491 409 aaKnown RBP7.05□□□□□ -1.28
SCM3YDL139C ISF1P32488 338 aa7.05□□□□□ -1.28
SCM3YDL139C STE20Q03497 939 aaKnown RBP7.04□□□□□ -1.28
SCM3YDL139C DFG5Q05031 458 aa7.04□□□□□ -1.28
SCM3YDL139C YPR204WQ08995 1032 aa7.04□□□□□ -1.28
SCM3YDL139C SUP45P12385 437 aaKnown RBP7.03□□□□□ -1.28
SCM3YDL139C RTG2P32608 588 aaKnown RBP7.03□□□□□ -1.28
SCM3YDL139C RGA1P39083 1007 aa7.03□□□□□ -1.28
SCM3YDL139C OPT2Q06593 877 aa7.03□□□□□ -1.28
SCM3YDL139C ARG82P07250 355 aa7.02□□□□□ -1.29
SCM3YDL139C AAD14P42884 376 aa7.02□□□□□ -1.29
SCM3YDL139C EMP47P43555 445 aa7.02□□□□□ -1.29
SCM3YDL139C NUP85P46673 744 aa7.02□□□□□ -1.29
SCM3YDL139C YPL062WQ02781 134 aa7.02□□□□□ -1.29
SCM3YDL139C RAD9P14737 1309 aa7.01□□□□□ -1.29
SCM3YDL139C ENO2P00925 437 aaKnown RBP7.01□□□□□ -1.29
SCM3YDL139C SPT5P27692 1063 aaKnown RBP7.01□□□□□ -1.29
SCM3YDL139C SUB2Q07478 446 aaKnown RBP7.01□□□□□ -1.29
SCM3YDL139C FRA1Q07825 749 aa7.01□□□□□ -1.29
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms