RNA–Protein interactions for RNA: ENST00000569732.1

CNOT1-218, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 906 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-218ENST00000569732 CEP162Q5TB80 1403 aa11.36□□□□□ -0.59
CNOT1-218ENST00000569732 HSPA1LP34931 641 aa11.36□□□□□ -0.59
CNOT1-218ENST00000569732 KDM5DQ9BY66 1539 aa11.35□□□□□ -0.59
CNOT1-218ENST00000569732 PIP4K2BP78356 416 aa11.35□□□□□ -0.59
CNOT1-218ENST00000569732 FARP1Q9Y4F1 1045 aaPredicted RBP11.35□□□□□ -0.59
CNOT1-218ENST00000569732 PZPP20742 1482 aa11.34□□□□□ -0.59
CNOT1-218ENST00000569732 DHX29Q7Z478 1369 aaKnown RBP11.34□□□□□ -0.59
CNOT1-218ENST00000569732 TNRQ92752 1358 aa11.34□□□□□ -0.59
CNOT1-218ENST00000569732 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.34□□□□□ -0.59
CNOT1-218ENST00000569732 ZFP91Q96JP5 570 aaPredicted RBP11.34□□□□□ -0.59
CNOT1-218ENST00000569732 TSPYL2Q9H2G4 693 aaPredicted RBP11.34□□□□□ -0.59
CNOT1-218ENST00000569732 STK24Q9Y6E0 443 aa11.34□□□□□ -0.59
CNOT1-218ENST00000569732 DEPDC5O75140 1603 aa11.34□□□□□ -0.59
CNOT1-218ENST00000569732 TIAM1Q13009 1591 aa11.33□□□□□ -0.6
CNOT1-218ENST00000569732 VWDEQ8N2E2 1590 aa11.33□□□□□ -0.6
CNOT1-218ENST00000569732 MED14O60244 1454 aa11.33□□□□□ -0.6
CNOT1-218ENST00000569732 NLRP1Q9C000 1473 aa11.33□□□□□ -0.6
CNOT1-218ENST00000569732 MBD5Q9P267 1494 aa11.33□□□□□ -0.6
CNOT1-218ENST00000569732 MTUS2Q5JR59 1369 aa11.33□□□□□ -0.6
CNOT1-218ENST00000569732 GTPBP6O43824 516 aaPredicted RBP11.33□□□□□ -0.6
CNOT1-218ENST00000569732 BCL11BQ9C0K0 894 aaPredicted RBP11.33□□□□□ -0.6
CNOT1-218ENST00000569732 ANKLE2Q86XL3 938 aa11.32□□□□□ -0.6
CNOT1-218ENST00000569732 EHBP1L1Q8N3D4 1523 aa11.31□□□□□ -0.6
CNOT1-218ENST00000569732 THEMISQ8N1K5 641 aaPredicted RBP11.31□□□□□ -0.6
CNOT1-218ENST00000569732 UGGT1Q9NYU2 1555 aa11.31□□□□□ -0.6
CNOT1-218ENST00000569732 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.3□□□□□ -0.6
CNOT1-218ENST00000569732 SYNMO15061 1565 aa11.3□□□□□ -0.6
CNOT1-218ENST00000569732 IQGAP1P46940 1657 aa11.3□□□□□ -0.6
CNOT1-218ENST00000569732 NPHP4O75161 1426 aaPredicted RBP11.29□□□□□ -0.6
CNOT1-218ENST00000569732 MIA2Q96PC5 1412 aa11.29□□□□□ -0.6
CNOT1-218ENST00000569732 RNF17Q9BXT8 1623 aaKnown RBP11.29□□□□□ -0.6
CNOT1-218ENST00000569732 ALKQ9UM73 1620 aa11.29□□□□□ -0.6
CNOT1-218ENST00000569732 PRKAR2AP13861 404 aaKnown RBP11.29□□□□□ -0.6
CNOT1-218ENST00000569732 FBXO31Q5XUX0 539 aaPredicted RBP11.29□□□□□ -0.6
CNOT1-218ENST00000569732 CCDC141Q6ZP82 1450 aa11.29□□□□□ -0.6
CNOT1-218ENST00000569732 WASHC2CQ9Y4E1 1318 aa11.29□□□□□ -0.6
CNOT1-218ENST00000569732 KIF3BO15066 747 aa11.28□□□□□ -0.6
CNOT1-218ENST00000569732 RSPH4AQ5TD94 716 aa11.28□□□□□ -0.6
CNOT1-218ENST00000569732 ZNF644Q9H582 1327 aaPredicted RBP11.28□□□□□ -0.6
CNOT1-218ENST00000569732 ZC3H13Q5T200 1668 aaKnown RBP11.27□□□□□ -0.61
CNOT1-218ENST00000569732 ZNF467Q7Z7K2 595 aaPredicted RBP11.26□□□□□ -0.61
CNOT1-218ENST00000569732 RYDENQ9NUL5 291 aaKnown RBP11.26□□□□□ -0.61
CNOT1-218ENST00000569732 LRRC7Q96NW7 1537 aa11.25□□□□□ -0.61
CNOT1-218ENST00000569732 FXR2P51116 673 aaKnown RBP eCLIP11.25□□□□□ -0.614e-10■■■□□ 16.9
CNOT1-218ENST00000569732 CAMSAP2Q08AD1 1489 aa11.25□□□□□ -0.61
CNOT1-218ENST00000569732 ARHGEF5Q12774 1597 aa11.24□□□□□ -0.61
CNOT1-218ENST00000569732 STRCP1A6NGW2 1772 aa11.23□□□□□ -0.61
CNOT1-218ENST00000569732 VPS8Q8N3P4 1428 aa11.22□□□□□ -0.61
CNOT1-218ENST00000569732 EIF2AK4Q9P2K8 1649 aaKnown RBP11.22□□□□□ -0.61
CNOT1-218ENST00000569732 ABCC3O15438 1527 aa11.21□□□□□ -0.61
CNOT1-218ENST00000569732 TSPY4P0CV99 314 aa11.21□□□□□ -0.61
CNOT1-218ENST00000569732 TSPY10P0CW01 314 aa11.21□□□□□ -0.61
CNOT1-218ENST00000569732 CCDC61Q9Y6R9 512 aa11.21□□□□□ -0.61
CNOT1-218ENST00000569732 MAST1Q9Y2H9 1570 aa11.2□□□□□ -0.62
CNOT1-218ENST00000569732 ERVK-7P63135 1459 aa11.2□□□□□ -0.62
CNOT1-218ENST00000569732 NCOA2Q15596 1464 aa11.2□□□□□ -0.62
CNOT1-218ENST00000569732 PRKCSHP14314 528 aaPredicted RBP11.2□□□□□ -0.62
CNOT1-218ENST00000569732 UBR1Q8IWV7 1749 aa11.2□□□□□ -0.62
CNOT1-218ENST00000569732 PDAP1Q13442 181 aaKnown RBP11.19□□□□□ -0.62
CNOT1-218ENST00000569732 PCDHB8Q9UN66 801 aa11.19□□□□□ -0.62
CNOT1-218ENST00000569732 PCDHB13Q9Y5F0 798 aa11.19□□□□□ -0.62
CNOT1-218ENST00000569732 SCAF11Q99590 1463 aaKnown RBP11.19□□□□□ -0.62
CNOT1-218ENST00000569732 PAK3O75914 559 aaPredicted RBP11.18□□□□□ -0.62
CNOT1-218ENST00000569732 SLIT1O75093 1534 aa11.18□□□□□ -0.62
CNOT1-218ENST00000569732 ARHGAP23Q9P227 1491 aa11.17□□□□□ -0.62
CNOT1-218ENST00000569732 CHRDL2Q6WN34 429 aa11.16□□□□□ -0.62
CNOT1-218ENST00000569732 RGS17Q9UGC6 210 aaPredicted RBP11.16□□□□□ -0.62
CNOT1-218ENST00000569732 MROH1Q8NDA8 1641 aa11.16□□□□□ -0.62
CNOT1-218ENST00000569732 XIRP1Q702N8 1843 aaKnown RBP11.15□□□□□ -0.62
CNOT1-218ENST00000569732 ZNF579Q8NAF0 562 aaKnown RBP11.15□□□□□ -0.62
CNOT1-218ENST00000569732 FAM135BQ49AJ0 1406 aa11.15□□□□□ -0.62
CNOT1-218ENST00000569732 CEP152O94986 1710 aa11.15□□□□□ -0.63
CNOT1-218ENST00000569732 NBR1Q14596 966 aa11.14□□□□□ -0.63
CNOT1-218ENST00000569732 ARHGAP31Q2M1Z3 1444 aa11.14□□□□□ -0.63
CNOT1-218ENST00000569732 DUOX2Q9NRD8 1548 aa11.14□□□□□ -0.63
CNOT1-218ENST00000569732 PSEN1P49768 467 aa11.13□□□□□ -0.63
CNOT1-218ENST00000569732 TPRNQ4KMQ1 711 aa11.13□□□□□ -0.63
CNOT1-218ENST00000569732 PIP4P2Q8N4L2 257 aa11.13□□□□□ -0.63
CNOT1-218ENST00000569732 EID1Q9Y6B2 187 aa11.13□□□□□ -0.63
CNOT1-218ENST00000569732 KDM5AP29375 1690 aaKnown RBP11.13□□□□□ -0.63
CNOT1-218ENST00000569732 PRDM15P57071 1507 aaPredicted RBP11.13□□□□□ -0.63
CNOT1-218ENST00000569732 LTKP29376 864 aa11.12□□□□□ -0.63
CNOT1-218ENST00000569732 TXNDC2Q86VQ3 553 aa11.12□□□□□ -0.63
CNOT1-218ENST00000569732 LRRC9Q6ZRR7 1453 aa11.12□□□□□ -0.63
CNOT1-218ENST00000569732 MAP3K1Q13233 1512 aa11.11□□□□□ -0.63
CNOT1-218ENST00000569732 TMEM2Q9UHN6 1383 aa11.1□□□□□ -0.63
CNOT1-218ENST00000569732 ROBO1Q9Y6N7 1651 aa11.1□□□□□ -0.63
CNOT1-218ENST00000569732 ERBINQ96RT1 1412 aa11.09□□□□□ -0.63
CNOT1-218ENST00000569732 PIK3C2BO00750 1634 aa11.09□□□□□ -0.63
CNOT1-218ENST00000569732 MYOM3Q5VTT5 1437 aa11.09□□□□□ -0.63
CNOT1-218ENST00000569732 TMEM94Q12767 1356 aa11.08□□□□□ -0.64
CNOT1-218ENST00000569732 IFNL1Q8IU54 200 aa11.08□□□□□ -0.64
CNOT1-218ENST00000569732 EFCAB6Q5THR3 1501 aa11.08□□□□□ -0.64
CNOT1-218ENST00000569732 NKTRP30414 1462 aaKnown RBP11.07□□□□□ -0.64
CNOT1-218ENST00000569732 MAP3K13O43283 966 aa11.07□□□□□ -0.64
CNOT1-218ENST00000569732 POTEAQ6S8J7 498 aa11.07□□□□□ -0.64
CNOT1-218ENST00000569732 KIF12Q96FN5 646 aa11.07□□□□□ -0.64
CNOT1-218ENST00000569732 TET3O43151 1660 aa11.07□□□□□ -0.64
CNOT1-218ENST00000569732 NWD1Q149M9 1564 aa11.07□□□□□ -0.64
CNOT1-218ENST00000569732 CROCC2H7BZ55 1655 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms