RNA–Protein interactions for RNA: ENST00000558709.1

SCG3-203, Transcript of secretogranin III, humanhuman

TSL 2

Gene SCG3, Length 896 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-203ENST00000558709 EVI5O60447 810 aa13.52□□□□□ -0.25
SCG3-203ENST00000558709 HAP1P54257 671 aaPredicted RBP13.52□□□□□ -0.25
SCG3-203ENST00000558709 ABCA9Q8IUA7 1624 aa13.51□□□□□ -0.25
SCG3-203ENST00000558709 DPYSL4O14531 572 aa13.51□□□□□ -0.25
SCG3-203ENST00000558709 MAP3K9P80192 1104 aa13.51□□□□□ -0.25
SCG3-203ENST00000558709 ZNF687Q8N1G0 1237 aa13.5□□□□□ -0.25
SCG3-203ENST00000558709 KRTAP3-3Q9BYR6 98 aa13.5□□□□□ -0.25
SCG3-203ENST00000558709 KRTAP3-2Q9BYR7 98 aa13.5□□□□□ -0.25
SCG3-203ENST00000558709 FRMPD1Q5SYB0 1578 aa13.49□□□□□ -0.25
SCG3-203ENST00000558709 LMTK3Q96Q04 1460 aa13.49□□□□□ -0.25
SCG3-203ENST00000558709 KCNH8Q96L42 1107 aa13.49□□□□□ -0.25
SCG3-203ENST00000558709 PSDA5PKW4 1024 aaPredicted RBP13.47□□□□□ -0.25
SCG3-203ENST00000558709 GOLGA3Q08378 1498 aa13.47□□□□□ -0.25
SCG3-203ENST00000558709 KDM2AQ9Y2K7 1162 aa13.46□□□□□ -0.25
SCG3-203ENST00000558709 RICTORQ6R327 1708 aa13.45□□□□□ -0.26
SCG3-203ENST00000558709 PDIA6Q15084 440 aa13.45□□□□□ -0.26
SCG3-203ENST00000558709 FOSBP53539 338 aa13.44□□□□□ -0.26
SCG3-203ENST00000558709 POTEEQ6S8J3 1075 aa13.44□□□□□ -0.26
SCG3-203ENST00000558709 KCNV2Q8TDN2 545 aa13.44□□□□□ -0.26
SCG3-203ENST00000558709 SIGLEC1Q9BZZ2 1709 aa13.43□□□□□ -0.26
SCG3-203ENST00000558709 ARHGEF40Q8TER5 1519 aa13.43□□□□□ -0.26
SCG3-203ENST00000558709 FER1L4A9Z1Z3 1794 aa13.42□□□□□ -0.26
SCG3-203ENST00000558709 PTGER2P43116 358 aa13.41□□□□□ -0.26
SCG3-203ENST00000558709 SPDYE16A6NNV3 312 aaPredicted RBP13.4□□□□□ -0.26
SCG3-203ENST00000558709 PPP4R3BQ5MIZ7 849 aa13.39□□□□□ -0.27
SCG3-203ENST00000558709 NEO1Q92859 1461 aa13.39□□□□□ -0.27
SCG3-203ENST00000558709 ATP10BO94823 1461 aa13.38□□□□□ -0.27
SCG3-203ENST00000558709 VSIG10Q8N0Z9 540 aa13.38□□□□□ -0.27
SCG3-203ENST00000558709 ARHGEF1Q92888 912 aaKnown RBP13.38□□□□□ -0.27
SCG3-203ENST00000558709 RAPGEF6Q8TEU7 1601 aa13.38□□□□□ -0.27
SCG3-203ENST00000558709 PHLDB1Q86UU1 1377 aa13.37□□□□□ -0.27
SCG3-203ENST00000558709 ARID3CA6NKF2 412 aa13.37□□□□□ -0.27
SCG3-203ENST00000558709 RAPGEF3O95398 923 aa13.37□□□□□ -0.27
SCG3-203ENST00000558709 PBX2P40425 430 aa13.37□□□□□ -0.27
SCG3-203ENST00000558709 ZNF454Q8N9F8 522 aa13.37□□□□□ -0.27
SCG3-203ENST00000558709 PCDHGA10Q9Y5H3 936 aa13.36□□□□□ -0.27
SCG3-203ENST00000558709 ARID4BQ4LE39 1312 aaPredicted RBP13.36□□□□□ -0.27
SCG3-203ENST00000558709 CFAP74Q9C0B2 1584 aa13.35□□□□□ -0.27
SCG3-203ENST00000558709 PREX1Q8TCU6 1659 aa13.34□□□□□ -0.27
SCG3-203ENST00000558709 SAMD9Q5K651 1589 aa13.34□□□□□ -0.27
SCG3-203ENST00000558709 PHF14O94880 888 aa13.34□□□□□ -0.27
SCG3-203ENST00000558709 HSPA2P54652 639 aa13.34□□□□□ -0.27
SCG3-203ENST00000558709 P3H3Q8IVL6 736 aa13.34□□□□□ -0.27
SCG3-203ENST00000558709 BCL2L12Q9HB09 334 aa13.33□□□□□ -0.28
SCG3-203ENST00000558709 TTC37Q6PGP7 1564 aa13.32□□□□□ -0.28
SCG3-203ENST00000558709 STRCQ7RTU9 1775 aa13.32□□□□□ -0.28
SCG3-203ENST00000558709 ZMYM4Q5VZL5 1548 aa13.31□□□□□ -0.28
SCG3-203ENST00000558709 ZDHHC16Q969W1 377 aa13.31□□□□□ -0.28
SCG3-203ENST00000558709 FANCAO15360 1455 aa13.3□□□□□ -0.28
SCG3-203ENST00000558709 SPATA31D1Q6ZQQ2 1576 aa13.3□□□□□ -0.28
SCG3-203ENST00000558709 ARHGAP33O14559 1287 aa13.3□□□□□ -0.28
SCG3-203ENST00000558709 CERKQ8TCT0 537 aa13.3□□□□□ -0.28
SCG3-203ENST00000558709 ADAM33Q9BZ11 813 aa13.3□□□□□ -0.28
SCG3-203ENST00000558709 AXIN2Q9Y2T1 843 aa13.3□□□□□ -0.28
SCG3-203ENST00000558709 TYW1BQ6NUM6 668 aa13.29□□□□□ -0.28
SCG3-203ENST00000558709 ILDR2Q71H61 639 aa13.29□□□□□ -0.28
SCG3-203ENST00000558709 PRXQ9BXM0 1461 aa13.29□□□□□ -0.28
SCG3-203ENST00000558709 EFCAB5A4FU69 1503 aa13.29□□□□□ -0.28
SCG3-203ENST00000558709 ZFYVE16Q7Z3T8 1539 aa13.29□□□□□ -0.28
SCG3-203ENST00000558709 LSM11P83369 360 aaKnown RBP eCLIP13.28□□□□□ -0.28
SCG3-203ENST00000558709 DDX12PQ92771 950 aa13.28□□□□□ -0.28
SCG3-203ENST00000558709 EPAS1Q99814 870 aa13.28□□□□□ -0.28
SCG3-203ENST00000558709 DISP3Q9P2K9 1392 aa13.28□□□□□ -0.28
SCG3-203ENST00000558709 DENND4BO75064 1496 aaPredicted RBP13.28□□□□□ -0.28
SCG3-203ENST00000558709 FBXW7Q969H0 707 aa13.27□□□□□ -0.29
SCG3-203ENST00000558709 PSEN2P49810 448 aa13.26□□□□□ -0.29
SCG3-203ENST00000558709 SPNS2Q8IVW8 549 aa13.26□□□□□ -0.29
SCG3-203ENST00000558709 SETD1BQ9UPS6 1966 aaKnown RBP13.26□□□□□ -0.29
SCG3-203ENST00000558709 HECW1Q76N89 1606 aa13.25□□□□□ -0.29
SCG3-203ENST00000558709 NUP153P49790 1475 aaKnown RBP13.25□□□□□ -0.29
SCG3-203ENST00000558709 FHOD3Q2V2M9 1422 aa13.25□□□□□ -0.29
SCG3-203ENST00000558709 POGZQ7Z3K3 1410 aa13.25□□□□□ -0.29
SCG3-203ENST00000558709 SOCS7O14512 581 aa13.25□□□□□ -0.29
SCG3-203ENST00000558709 DMRTA1Q5VZB9 504 aa13.25□□□□□ -0.29
SCG3-203ENST00000558709 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.24□□□□□ -0.29
SCG3-203ENST00000558709 AKNAQ7Z591 1439 aa13.24□□□□□ -0.29
SCG3-203ENST00000558709 YEATS2Q9ULM3 1422 aa13.24□□□□□ -0.29
SCG3-203ENST00000558709 PRIM1P49642 420 aaKnown RBP13.23□□□□□ -0.29
SCG3-203ENST00000558709 KCNK17Q96T54 332 aa13.23□□□□□ -0.29
SCG3-203ENST00000558709 FAM9AQ8IZU1 332 aaPredicted RBP13.22□□□□□ -0.29
SCG3-203ENST00000558709 MYO5CQ9NQX4 1742 aa13.22□□□□□ -0.29
SCG3-203ENST00000558709 PTPREP23469 700 aa13.21□□□□□ -0.29
SCG3-203ENST00000558709 EN1Q05925 392 aaPredicted RBP13.21□□□□□ -0.29
SCG3-203ENST00000558709 NBR1Q14596 966 aa13.21□□□□□ -0.29
SCG3-203ENST00000558709 ARHGEF12Q9NZN5 1544 aa13.21□□□□□ -0.29
SCG3-203ENST00000558709 OSBPP22059 807 aa13.2□□□□□ -0.3
SCG3-203ENST00000558709 MAGI2Q86UL8 1455 aa13.19□□□□□ -0.3
SCG3-203ENST00000558709 TK2O00142 265 aa13.19□□□□□ -0.3
SCG3-203ENST00000558709 C3P01024 1663 aa13.18□□□□□ -0.3
SCG3-203ENST00000558709 MLLT3P42568 568 aaPredicted RBP13.18□□□□□ -0.3
SCG3-203ENST00000558709 SLC4A5Q9BY07 1137 aa13.18□□□□□ -0.3
SCG3-203ENST00000558709 GRXCR2A6NFK2 248 aa13.17□□□□□ -0.3
SCG3-203ENST00000558709 MLECQ14165 292 aa13.17□□□□□ -0.3
SCG3-203ENST00000558709 ANKRD13DQ6ZTN6 518 aa13.17□□□□□ -0.3
SCG3-203ENST00000558709 PPP1R3GB7ZBB8 358 aa13.16□□□□□ -0.3
SCG3-203ENST00000558709 COL9A1P20849 921 aa13.16□□□□□ -0.3
SCG3-203ENST00000558709 C6orf132Q5T0Z8 1188 aa13.16□□□□□ -0.3
SCG3-203ENST00000558709 ADGRD1Q6QNK2 874 aa13.16□□□□□ -0.3
SCG3-203ENST00000558709 ZBED2Q9BTP6 218 aa13.16□□□□□ -0.3
SCG3-203ENST00000558709 SEMA3EO15041 775 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 120.7 ms