RNA–Protein interactions for RNA: ENST00000518442.5

EIF3E-204, Transcript of eukaryotic translation initiation factor 3 subunit E, humanhuman

TSL 1 (best)

Gene EIF3E, Length 1,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3E-204ENST00000518442 MPHOSPH9Q99550 1183 aa13.24□□□□□ -0.29
EIF3E-204ENST00000518442 NOS1P29475 1434 aa13.23□□□□□ -0.29
EIF3E-204ENST00000518442 NLRP1Q9C000 1473 aa13.23□□□□□ -0.29
EIF3E-204ENST00000518442 ZNF142P52746 1687 aaPredicted RBP13.22□□□□□ -0.29
EIF3E-204ENST00000518442 PIK3C2BO00750 1634 aa13.22□□□□□ -0.29
EIF3E-204ENST00000518442 RPRD2Q5VT52 1461 aaKnown RBP13.22□□□□□ -0.29
EIF3E-204ENST00000518442 THEMISQ8N1K5 641 aaPredicted RBP13.2□□□□□ -0.3
EIF3E-204ENST00000518442 NUTM2DQ5VT03 806 aaPredicted RBP13.19□□□□□ -0.3
EIF3E-204ENST00000518442 CHRDL2Q6WN34 429 aa13.19□□□□□ -0.3
EIF3E-204ENST00000518442 SPHKAPQ2M3C7 1700 aa13.19□□□□□ -0.3
EIF3E-204ENST00000518442 STRCQ7RTU9 1775 aa13.18□□□□□ -0.3
EIF3E-204ENST00000518442 PCGF6Q9BYE7 350 aa13.18□□□□□ -0.3
EIF3E-204ENST00000518442 SLC52A1Q9NWF4 448 aa13.18□□□□□ -0.3
EIF3E-204ENST00000518442 UBR1Q8IWV7 1749 aa13.18□□□□□ -0.3
EIF3E-204ENST00000518442 PLA2R1Q13018 1463 aa13.16□□□□□ -0.3
EIF3E-204ENST00000518442 MYO5BQ9ULV0 1848 aa13.16□□□□□ -0.3
EIF3E-204ENST00000518442 LTKP29376 864 aa13.16□□□□□ -0.3
EIF3E-204ENST00000518442 ANKLE2Q86XL3 938 aa13.16□□□□□ -0.3
EIF3E-204ENST00000518442 PTPRTO14522 1441 aa13.15□□□□□ -0.3
EIF3E-204ENST00000518442 ADGRB3O60242 1522 aa13.15□□□□□ -0.3
EIF3E-204ENST00000518442 CLTCL1P53675 1640 aa13.15□□□□□ -0.3
EIF3E-204ENST00000518442 ZNF326Q5BKZ1 582 aaKnown RBP13.15□□□□□ -0.3
EIF3E-204ENST00000518442 TXNDC2Q86VQ3 553 aa13.15□□□□□ -0.3
EIF3E-204ENST00000518442 TRPM2O94759 1503 aa13.13□□□□□ -0.31
EIF3E-204ENST00000518442 TMEM2Q9UHN6 1383 aa13.13□□□□□ -0.31
EIF3E-204ENST00000518442 BCANQ96GW7 911 aa13.13□□□□□ -0.31
EIF3E-204ENST00000518442 PPP1R15AO75807 674 aaPredicted RBP13.12□□□□□ -0.31
EIF3E-204ENST00000518442 RGL3Q3MIN7 710 aa13.12□□□□□ -0.31
EIF3E-204ENST00000518442 EID1Q9Y6B2 187 aa13.12□□□□□ -0.31
EIF3E-204ENST00000518442 TMEM131LA2VDJ0 1609 aa13.12□□□□□ -0.31
EIF3E-204ENST00000518442 POLR1AO95602 1720 aaPredicted RBP13.11□□□□□ -0.31
EIF3E-204ENST00000518442 HRCP23327 699 aa13.11□□□□□ -0.31
EIF3E-204ENST00000518442 AKT1S1Q96B36 256 aa13.11□□□□□ -0.31
EIF3E-204ENST00000518442 NEURL4Q96JN8 1562 aa13.11□□□□□ -0.31
EIF3E-204ENST00000518442 SCAF11Q99590 1463 aaKnown RBP13.1□□□□□ -0.31
EIF3E-204ENST00000518442 CCDC144AA2RUR9 1427 aa13.1□□□□□ -0.31
EIF3E-204ENST00000518442 NPHP4O75161 1426 aaPredicted RBP13.1□□□□□ -0.31
EIF3E-204ENST00000518442 RIMS2Q9UQ26 1411 aa13.1□□□□□ -0.31
EIF3E-204ENST00000518442 ARHGAP23Q9P227 1491 aa13.09□□□□□ -0.31
EIF3E-204ENST00000518442 ACIN1Q9UKV3 1341 aaKnown RBP13.09□□□□□ -0.31
EIF3E-204ENST00000518442 SLIT1O75093 1534 aa13.08□□□□□ -0.31
EIF3E-204ENST00000518442 SLC26A8Q96RN1 970 aa13.08□□□□□ -0.32
EIF3E-204ENST00000518442 KIF1BO60333 1816 aa13.08□□□□□ -0.32
EIF3E-204ENST00000518442 ZNF335Q9H4Z2 1342 aaPredicted RBP13.08□□□□□ -0.32
EIF3E-204ENST00000518442 ANKRD30BQ9BXX2 1392 aa13.07□□□□□ -0.32
EIF3E-204ENST00000518442 ZFYVE9O95405 1425 aa13.06□□□□□ -0.32
EIF3E-204ENST00000518442 KDM5AP29375 1690 aaKnown RBP13.05□□□□□ -0.32
EIF3E-204ENST00000518442 IQGAP1P46940 1657 aa13.05□□□□□ -0.32
EIF3E-204ENST00000518442 DHX57Q6P158 1386 aaKnown RBP13.04□□□□□ -0.32
EIF3E-204ENST00000518442 MED14O60244 1454 aa13.04□□□□□ -0.32
EIF3E-204ENST00000518442 HDGFP51858 240 aaKnown RBP13.03□□□□□ -0.32
EIF3E-204ENST00000518442 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.03□□□□□ -0.32
EIF3E-204ENST00000518442 SIN3AQ96ST3 1273 aa13.03□□□□□ -0.32
EIF3E-204ENST00000518442 NEUROD1Q13562 356 aa13.02□□□□□ -0.33
EIF3E-204ENST00000518442 NEXMIFQ5QGS0 1516 aa13.02□□□□□ -0.33
EIF3E-204ENST00000518442 PLEKHG1Q9ULL1 1385 aa13.01□□□□□ -0.33
EIF3E-204ENST00000518442 SPATA31E1Q6ZUB1 1445 aa13.01□□□□□ -0.33
EIF3E-204ENST00000518442 RBM33Q96EV2 1170 aaKnown RBP13□□□□□ -0.33
EIF3E-204ENST00000518442 KDM2AQ9Y2K7 1162 aa13□□□□□ -0.33
EIF3E-204ENST00000518442 ADGRF5Q8IZF2 1346 aa12.99□□□□□ -0.33
EIF3E-204ENST00000518442 ADAMTS13Q76LX8 1427 aa12.97□□□□□ -0.33
EIF3E-204ENST00000518442 VGFO15240 615 aaPredicted RBP12.97□□□□□ -0.33
EIF3E-204ENST00000518442 CERKQ8TCT0 537 aa12.97□□□□□ -0.33
EIF3E-204ENST00000518442 DCAF11Q8TEB1 546 aa12.97□□□□□ -0.33
EIF3E-204ENST00000518442 LTBP4Q8N2S1 1624 aa12.97□□□□□ -0.33
EIF3E-204ENST00000518442 STRCP1A6NGW2 1772 aa12.97□□□□□ -0.33
EIF3E-204ENST00000518442 PPLO60437 1756 aa12.97□□□□□ -0.33
EIF3E-204ENST00000518442 RPGRIP1LQ68CZ1 1315 aa12.96□□□□□ -0.33
EIF3E-204ENST00000518442 REM2Q8IYK8 340 aaPredicted RBP12.96□□□□□ -0.33
EIF3E-204ENST00000518442 MKRN4PQ13434 485 aaPredicted RBP12.95□□□□□ -0.34
EIF3E-204ENST00000518442 NRXN3Q9Y4C0 1643 aa12.95□□□□□ -0.34
EIF3E-204ENST00000518442 TBX22Q9Y458 520 aa12.94□□□□□ -0.34
EIF3E-204ENST00000518442 METP08581 1390 aa12.94□□□□□ -0.34
EIF3E-204ENST00000518442 KCNA6P17658 529 aa12.93□□□□□ -0.34
EIF3E-204ENST00000518442 IFT172Q9UG01 1749 aa12.93□□□□□ -0.34
EIF3E-204ENST00000518442 TMEM132EQ6IEE7 984 aa12.92□□□□□ -0.34
EIF3E-204ENST00000518442 PROSER2Q86WR7 435 aaPredicted RBP12.92□□□□□ -0.34
EIF3E-204ENST00000518442 PTPRUQ92729 1446 aa12.92□□□□□ -0.34
EIF3E-204ENST00000518442 AMOTL2Q9Y2J4 779 aa12.92□□□□□ -0.34
EIF3E-204ENST00000518442 SETBP1Q9Y6X0 1596 aa12.92□□□□□ -0.34
EIF3E-204ENST00000518442 CFAP70Q5T0N1 1121 aa12.91□□□□□ -0.34
EIF3E-204ENST00000518442 PLSCR2Q9NRY7 297 aa12.91□□□□□ -0.34
EIF3E-204ENST00000518442 STK26Q9P289 416 aa12.91□□□□□ -0.34
EIF3E-204ENST00000518442 ALKQ9UM73 1620 aa12.91□□□□□ -0.34
EIF3E-204ENST00000518442 SPDYE2BA6NHP3 402 aa12.9□□□□□ -0.34
EIF3E-204ENST00000518442 SPDYE6P0CI01 402 aa12.9□□□□□ -0.34
EIF3E-204ENST00000518442 SPDYE2Q495Y8 402 aa12.9□□□□□ -0.34
EIF3E-204ENST00000518442 CCER1Q8TC90 406 aaPredicted RBP12.9□□□□□ -0.34
EIF3E-204ENST00000518442 L3MBTL2Q969R5 705 aa12.9□□□□□ -0.34
EIF3E-204ENST00000518442 LRRC7Q96NW7 1537 aa12.89□□□□□ -0.35
EIF3E-204ENST00000518442 C14orf37Q86TY3 774 aa12.89□□□□□ -0.35
EIF3E-204ENST00000518442 TMEM94Q12767 1356 aa12.89□□□□□ -0.35
EIF3E-204ENST00000518442 DIP2AQ14689 1571 aa12.89□□□□□ -0.35
EIF3E-204ENST00000518442 PIK3C2GO75747 1445 aa12.88□□□□□ -0.35
EIF3E-204ENST00000518442 CPS1P31327 1500 aa12.88□□□□□ -0.35
EIF3E-204ENST00000518442 CHD2O14647 1828 aaKnown RBP12.88□□□□□ -0.35
EIF3E-204ENST00000518442 MYOM2P54296 1465 aa12.87□□□□□ -0.35
EIF3E-204ENST00000518442 UBAP1LF5GYI3 381 aa12.87□□□□□ -0.35
EIF3E-204ENST00000518442 SETD1AO15047 1707 aaKnown RBP12.87□□□□□ -0.35
EIF3E-204ENST00000518442 PIP4K2BP78356 416 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms