RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 ERBB3P21860 1342 aa9.84□□□□□ -0.83
CDHR3-213ENST00000488386 ABCA8O94911 1581 aa9.84□□□□□ -0.83
CDHR3-213ENST00000488386 BCANQ96GW7 911 aa9.84□□□□□ -0.83
CDHR3-213ENST00000488386 KDM6BO15054 1643 aa9.84□□□□□ -0.83
CDHR3-213ENST00000488386 EPRSP07814 1512 aaKnown RBP9.83□□□□□ -0.84
CDHR3-213ENST00000488386 OSBPP22059 807 aa9.83□□□□□ -0.84
CDHR3-213ENST00000488386 HS3ST6Q96QI5 342 aa9.83□□□□□ -0.84
CDHR3-213ENST00000488386 SAMD9Q5K651 1589 aa9.83□□□□□ -0.84
CDHR3-213ENST00000488386 EEA1Q15075 1411 aa9.82□□□□□ -0.84
CDHR3-213ENST00000488386 PHF14O94880 888 aa9.82□□□□□ -0.84
CDHR3-213ENST00000488386 FHOD3Q2V2M9 1422 aa9.82□□□□□ -0.84
CDHR3-213ENST00000488386 GLI2P10070 1586 aa9.81□□□□□ -0.84
CDHR3-213ENST00000488386 KCNH8Q96L42 1107 aa9.81□□□□□ -0.84
CDHR3-213ENST00000488386 KIF21BO75037 1637 aa9.81□□□□□ -0.84
CDHR3-213ENST00000488386 POTEGQ6S5H5 508 aa9.8□□□□□ -0.84
CDHR3-213ENST00000488386 ADAM33Q9BZ11 813 aa9.8□□□□□ -0.84
CDHR3-213ENST00000488386 MAP3K4Q9Y6R4 1608 aa9.8□□□□□ -0.84
CDHR3-213ENST00000488386 WDR7Q9Y4E6 1490 aa9.79□□□□□ -0.84
CDHR3-213ENST00000488386 PPP4R3BQ5MIZ7 849 aa9.79□□□□□ -0.84
CDHR3-213ENST00000488386 TYW1BQ6NUM6 668 aa9.79□□□□□ -0.84
CDHR3-213ENST00000488386 POTEEQ6S8J3 1075 aa9.79□□□□□ -0.84
CDHR3-213ENST00000488386 RBM33Q96EV2 1170 aaKnown RBP9.79□□□□□ -0.84
CDHR3-213ENST00000488386 POTEMA6NI47 508 aa9.78□□□□□ -0.84
CDHR3-213ENST00000488386 EN1Q05925 392 aaPredicted RBP9.78□□□□□ -0.84
CDHR3-213ENST00000488386 RBM26Q5T8P6 1007 aaKnown RBP9.78□□□□□ -0.84
CDHR3-213ENST00000488386 ZDHHC16Q969W1 377 aa9.78□□□□□ -0.84
CDHR3-213ENST00000488386 EPAS1Q99814 870 aa9.78□□□□□ -0.84
CDHR3-213ENST00000488386 COL17A1Q9UMD9 1497 aaPredicted RBP9.78□□□□□ -0.84
CDHR3-213ENST00000488386 RAPGEF6Q8TEU7 1601 aa9.78□□□□□ -0.84
CDHR3-213ENST00000488386 TSR1Q2NL82 804 aaKnown RBP9.77□□□□□ -0.85
CDHR3-213ENST00000488386 CDHR5Q9HBB8 845 aa9.77□□□□□ -0.85
CDHR3-213ENST00000488386 ATP10BO94823 1461 aa9.77□□□□□ -0.85
CDHR3-213ENST00000488386 PSDA5PKW4 1024 aaPredicted RBP9.76□□□□□ -0.85
CDHR3-213ENST00000488386 UBTFP17480 764 aaKnown RBP9.76□□□□□ -0.85
CDHR3-213ENST00000488386 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.75□□□□□ -0.85
CDHR3-213ENST00000488386 NUP153P49790 1475 aaKnown RBP9.74□□□□□ -0.85
CDHR3-213ENST00000488386 MAP3K7O43318 606 aa9.74□□□□□ -0.85
CDHR3-213ENST00000488386 ZNF687Q8N1G0 1237 aa9.74□□□□□ -0.85
CDHR3-213ENST00000488386 FBXW7Q969H0 707 aa9.74□□□□□ -0.85
CDHR3-213ENST00000488386 BCL2L12Q9HB09 334 aa9.74□□□□□ -0.85
CDHR3-213ENST00000488386 AXIN2Q9Y2T1 843 aa9.74□□□□□ -0.85
CDHR3-213ENST00000488386 LMOD2Q6P5Q4 547 aa9.73□□□□□ -0.85
CDHR3-213ENST00000488386 CFAP43Q8NDM7 1665 aa9.73□□□□□ -0.85
CDHR3-213ENST00000488386 CD109Q6YHK3 1445 aa9.73□□□□□ -0.85
CDHR3-213ENST00000488386 PSEN2P49810 448 aa9.72□□□□□ -0.85
CDHR3-213ENST00000488386 SMYD5Q6GMV2 418 aa9.72□□□□□ -0.85
CDHR3-213ENST00000488386 TEX14Q8IWB6 1497 aa9.72□□□□□ -0.85
CDHR3-213ENST00000488386 GPR37O15354 613 aa9.71□□□□□ -0.86
CDHR3-213ENST00000488386 COL9A1P20849 921 aa9.71□□□□□ -0.86
CDHR3-213ENST00000488386 C6orf132Q5T0Z8 1188 aa9.71□□□□□ -0.86
CDHR3-213ENST00000488386 KCNK17Q96T54 332 aa9.71□□□□□ -0.86
CDHR3-213ENST00000488386 EFCAB5A4FU69 1503 aa9.71□□□□□ -0.86
CDHR3-213ENST00000488386 CDK13Q14004 1512 aaKnown RBP9.71□□□□□ -0.86
CDHR3-213ENST00000488386 ATP1B4Q9UN42 357 aaPredicted RBP9.7□□□□□ -0.86
CDHR3-213ENST00000488386 ARHGAP35Q9NRY4 1499 aa9.7□□□□□ -0.86
CDHR3-213ENST00000488386 KRTAP3-3Q9BYR6 98 aa9.69□□□□□ -0.86
CDHR3-213ENST00000488386 KRTAP3-2Q9BYR7 98 aa9.69□□□□□ -0.86
CDHR3-213ENST00000488386 ABCA9Q8IUA7 1624 aa9.68□□□□□ -0.86
CDHR3-213ENST00000488386 MAGI3Q5TCQ9 1506 aa9.68□□□□□ -0.86
CDHR3-213ENST00000488386 PTPREP23469 700 aa9.68□□□□□ -0.86
CDHR3-213ENST00000488386 DMRTA1Q5VZB9 504 aa9.68□□□□□ -0.86
CDHR3-213ENST00000488386 NPDC1Q9NQX5 325 aaPredicted RBP9.68□□□□□ -0.86
CDHR3-213ENST00000488386 NUTM2FA1L443 756 aa9.67□□□□□ -0.86
CDHR3-213ENST00000488386 TULP1O00294 542 aaPredicted RBP9.67□□□□□ -0.86
CDHR3-213ENST00000488386 LRRIQ1Q96JM4 1722 aa9.66□□□□□ -0.86
CDHR3-213ENST00000488386 ARHGAP33O14559 1287 aa9.66□□□□□ -0.86
CDHR3-213ENST00000488386 GPIHBP1Q8IV16 184 aa9.66□□□□□ -0.86
CDHR3-213ENST00000488386 CDAN1Q8IWY9 1227 aa9.66□□□□□ -0.86
CDHR3-213ENST00000488386 PPP1R3GB7ZBB8 358 aa9.65□□□□□ -0.86
CDHR3-213ENST00000488386 PBX2P40425 430 aa9.65□□□□□ -0.86
CDHR3-213ENST00000488386 PTGDRQ13258 359 aa9.65□□□□□ -0.86
CDHR3-213ENST00000488386 TTC37Q6PGP7 1564 aa9.65□□□□□ -0.86
CDHR3-213ENST00000488386 ADGRL1O94910 1474 aa9.65□□□□□ -0.87
CDHR3-213ENST00000488386 PLEKHD1A6NEE1 506 aa9.64□□□□□ -0.87
CDHR3-213ENST00000488386 RAPGEF3O95398 923 aa9.64□□□□□ -0.87
CDHR3-213ENST00000488386 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.64□□□□□ -0.87
CDHR3-213ENST00000488386 HECW1Q76N89 1606 aa9.64□□□□□ -0.87
CDHR3-213ENST00000488386 PROX2Q3B8N5 592 aa9.63□□□□□ -0.87
CDHR3-213ENST00000488386 LSM11P83369 360 aaKnown RBP eCLIP9.62□□□□□ -0.87
CDHR3-213ENST00000488386 ZBED2Q9BTP6 218 aa9.62□□□□□ -0.87
CDHR3-213ENST00000488386 PCF11O94913 1555 aaKnown RBP9.62□□□□□ -0.87
CDHR3-213ENST00000488386 KIF14Q15058 1648 aa9.61□□□□□ -0.87
CDHR3-213ENST00000488386 FECHP22830 423 aa9.61□□□□□ -0.87
CDHR3-213ENST00000488386 ZC3H15Q8WU90 426 aaKnown RBP9.61□□□□□ -0.87
CDHR3-213ENST00000488386 FAM198AQ9UFP1 575 aa9.61□□□□□ -0.87
CDHR3-213ENST00000488386 FMN1Q68DA7 1419 aa9.61□□□□□ -0.87
CDHR3-213ENST00000488386 FRMPD1Q5SYB0 1578 aa9.61□□□□□ -0.87
CDHR3-213ENST00000488386 FCHSD2O94868 740 aa9.6□□□□□ -0.87
CDHR3-213ENST00000488386 ARAP3Q8WWN8 1544 aa9.6□□□□□ -0.87
CDHR3-213ENST00000488386 NEO1Q92859 1461 aa9.59□□□□□ -0.87
CDHR3-213ENST00000488386 C3orf80F5H4A9 247 aa9.58□□□□□ -0.88
CDHR3-213ENST00000488386 PADI6Q6TGC4 694 aa9.58□□□□□ -0.88
CDHR3-213ENST00000488386 CDCA7LQ96GN5 454 aa9.58□□□□□ -0.88
CDHR3-213ENST00000488386 TSKSQ9UJT2 592 aa9.58□□□□□ -0.88
CDHR3-213ENST00000488386 FANCAO15360 1455 aa9.58□□□□□ -0.88
CDHR3-213ENST00000488386 CLIP1P30622 1438 aa9.57□□□□□ -0.88
CDHR3-213ENST00000488386 AKNAQ7Z591 1439 aa9.57□□□□□ -0.88
CDHR3-213ENST00000488386 PRSS12P56730 875 aa9.57□□□□□ -0.88
CDHR3-213ENST00000488386 VPS9D1Q9Y2B5 631 aa9.57□□□□□ -0.88
CDHR3-213ENST00000488386 RICTORQ6R327 1708 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms