RNA–Protein interactions for RNA: ENST00000471297.1

SMNDC1-204, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 823 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-204ENST00000471297 CLASP1Q7Z460 1538 aa9.18□□□□□ -0.94
SMNDC1-204ENST00000471297 RAPGEF6Q8TEU7 1601 aa9.17□□□□□ -0.94
SMNDC1-204ENST00000471297 RRBP1Q9P2E9 1410 aaKnown RBP9.17□□□□□ -0.94
SMNDC1-204ENST00000471297 OSBPP22059 807 aa9.17□□□□□ -0.94
SMNDC1-204ENST00000471297 PCDHGA10Q9Y5H3 936 aa9.17□□□□□ -0.94
SMNDC1-204ENST00000471297 FOSBP53539 338 aa9.15□□□□□ -0.94
SMNDC1-204ENST00000471297 RBM26Q5T8P6 1007 aaKnown RBP9.15□□□□□ -0.94
SMNDC1-204ENST00000471297 LMOD2Q6P5Q4 547 aa9.15□□□□□ -0.94
SMNDC1-204ENST00000471297 ZNF454Q8N9F8 522 aa9.15□□□□□ -0.94
SMNDC1-204ENST00000471297 EPAS1Q99814 870 aa9.15□□□□□ -0.94
SMNDC1-204ENST00000471297 EHBP1L1Q8N3D4 1523 aa9.15□□□□□ -0.95
SMNDC1-204ENST00000471297 NUP153P49790 1475 aaKnown RBP9.15□□□□□ -0.95
SMNDC1-204ENST00000471297 CCNB3Q8WWL7 1395 aa9.14□□□□□ -0.95
SMNDC1-204ENST00000471297 TYW1BQ6NUM6 668 aa9.14□□□□□ -0.95
SMNDC1-204ENST00000471297 MARVELD3Q96A59 401 aa9.14□□□□□ -0.95
SMNDC1-204ENST00000471297 ABCA8O94911 1581 aa9.14□□□□□ -0.95
SMNDC1-204ENST00000471297 PLB1Q6P1J6 1458 aa9.14□□□□□ -0.95
SMNDC1-204ENST00000471297 ERBB3P21860 1342 aa9.13□□□□□ -0.95
SMNDC1-204ENST00000471297 PSDA5PKW4 1024 aaPredicted RBP9.13□□□□□ -0.95
SMNDC1-204ENST00000471297 EMP3P54852 163 aa9.13□□□□□ -0.95
SMNDC1-204ENST00000471297 UACAQ9BZF9 1416 aa9.13□□□□□ -0.95
SMNDC1-204ENST00000471297 PHLDB1Q86UU1 1377 aa9.12□□□□□ -0.95
SMNDC1-204ENST00000471297 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.12□□□□□ -0.95
SMNDC1-204ENST00000471297 LRRIQ1Q96JM4 1722 aa9.12□□□□□ -0.95
SMNDC1-204ENST00000471297 PLEKHD1A6NEE1 506 aa9.12□□□□□ -0.95
SMNDC1-204ENST00000471297 PRIM1P49642 420 aaKnown RBP9.12□□□□□ -0.95
SMNDC1-204ENST00000471297 LCE2DQ5TA82 110 aaPredicted RBP9.12□□□□□ -0.95
SMNDC1-204ENST00000471297 ZDHHC16Q969W1 377 aa9.12□□□□□ -0.95
SMNDC1-204ENST00000471297 CDK13Q14004 1512 aaKnown RBP9.11□□□□□ -0.95
SMNDC1-204ENST00000471297 PPP4R3BQ5MIZ7 849 aa9.11□□□□□ -0.95
SMNDC1-204ENST00000471297 FBXW7Q969H0 707 aa9.11□□□□□ -0.95
SMNDC1-204ENST00000471297 RBM33Q96EV2 1170 aaKnown RBP9.11□□□□□ -0.95
SMNDC1-204ENST00000471297 SUPT6HQ7KZ85 1726 aaKnown RBP9.11□□□□□ -0.95
SMNDC1-204ENST00000471297 ATP10BO94823 1461 aa9.1□□□□□ -0.95
SMNDC1-204ENST00000471297 NCOA2Q15596 1464 aa9.1□□□□□ -0.95
SMNDC1-204ENST00000471297 FAM205CA6NFA0 338 aa9.1□□□□□ -0.95
SMNDC1-204ENST00000471297 ARID3CA6NKF2 412 aa9.1□□□□□ -0.95
SMNDC1-204ENST00000471297 HRCP23327 699 aa9.1□□□□□ -0.95
SMNDC1-204ENST00000471297 ZEB1P37275 1124 aaPredicted RBP9.1□□□□□ -0.95
SMNDC1-204ENST00000471297 TROQ12816 1431 aaPredicted RBP9.1□□□□□ -0.95
SMNDC1-204ENST00000471297 MYOM3Q5VTT5 1437 aa9.09□□□□□ -0.95
SMNDC1-204ENST00000471297 NUTM2FA1L443 756 aa9.09□□□□□ -0.95
SMNDC1-204ENST00000471297 MAP3K7O43318 606 aa9.09□□□□□ -0.95
SMNDC1-204ENST00000471297 EN1Q05925 392 aaPredicted RBP9.09□□□□□ -0.95
SMNDC1-204ENST00000471297 VARS2Q5ST30 1063 aaKnown RBP9.09□□□□□ -0.95
SMNDC1-204ENST00000471297 ARHGEF11O15085 1522 aa9.09□□□□□ -0.95
SMNDC1-204ENST00000471297 MAGI3Q5TCQ9 1506 aa9.09□□□□□ -0.95
SMNDC1-204ENST00000471297 UHRF1BP1LA0JNW5 1464 aa9.08□□□□□ -0.96
SMNDC1-204ENST00000471297 ERCC6L2Q5T890 1561 aa9.08□□□□□ -0.96
SMNDC1-204ENST00000471297 MIA2Q96PC5 1412 aa9.08□□□□□ -0.96
SMNDC1-204ENST00000471297 FAM50AQ14320 339 aaKnown RBP9.08□□□□□ -0.96
SMNDC1-204ENST00000471297 ADAM33Q9BZ11 813 aa9.08□□□□□ -0.96
SMNDC1-204ENST00000471297 FGD6Q6ZV73 1430 aa9.07□□□□□ -0.96
SMNDC1-204ENST00000471297 C6orf132Q5T0Z8 1188 aa9.07□□□□□ -0.96
SMNDC1-204ENST00000471297 ABCC2Q92887 1545 aa9.06□□□□□ -0.96
SMNDC1-204ENST00000471297 TSR1Q2NL82 804 aaKnown RBP9.06□□□□□ -0.96
SMNDC1-204ENST00000471297 TPRNQ4KMQ1 711 aa9.06□□□□□ -0.96
SMNDC1-204ENST00000471297 GPIHBP1Q8IV16 184 aa9.06□□□□□ -0.96
SMNDC1-204ENST00000471297 POTEB3A0JP26 581 aa9.05□□□□□ -0.96
SMNDC1-204ENST00000471297 POTEBQ6S5H4 581 aa9.05□□□□□ -0.96
SMNDC1-204ENST00000471297 ZC3H15Q8WU90 426 aaKnown RBP9.05□□□□□ -0.96
SMNDC1-204ENST00000471297 HS3ST6Q96QI5 342 aa9.04□□□□□ -0.96
SMNDC1-204ENST00000471297 BCL2L12Q9HB09 334 aa9.04□□□□□ -0.96
SMNDC1-204ENST00000471297 TCOF1Q13428 1488 aaKnown RBP9.03□□□□□ -0.96
SMNDC1-204ENST00000471297 PRKCSHP14314 528 aaPredicted RBP9.03□□□□□ -0.96
SMNDC1-204ENST00000471297 ITGAEP38570 1179 aa9.03□□□□□ -0.96
SMNDC1-204ENST00000471297 ZNF687Q8N1G0 1237 aa9.03□□□□□ -0.96
SMNDC1-204ENST00000471297 CCER1Q8TC90 406 aaPredicted RBP9.03□□□□□ -0.96
SMNDC1-204ENST00000471297 ADCY10Q96PN6 1610 aa9.02□□□□□ -0.96
SMNDC1-204ENST00000471297 KDM5BQ9UGL1 1544 aa9.02□□□□□ -0.97
SMNDC1-204ENST00000471297 PTPREP23469 700 aa9.02□□□□□ -0.97
SMNDC1-204ENST00000471297 CDHR5Q9HBB8 845 aa9.02□□□□□ -0.97
SMNDC1-204ENST00000471297 NPDC1Q9NQX5 325 aaPredicted RBP9.02□□□□□ -0.97
SMNDC1-204ENST00000471297 PTPN23Q9H3S7 1636 aa9.02□□□□□ -0.97
SMNDC1-204ENST00000471297 FCHSD2O94868 740 aa9.01□□□□□ -0.97
SMNDC1-204ENST00000471297 PTGDRQ13258 359 aa9.01□□□□□ -0.97
SMNDC1-204ENST00000471297 CFDP1Q9UEE9 299 aaPredicted RBP9.01□□□□□ -0.97
SMNDC1-204ENST00000471297 SETD5Q9C0A6 1442 aa9□□□□□ -0.97
SMNDC1-204ENST00000471297 CERKQ8TCT0 537 aa9□□□□□ -0.97
SMNDC1-204ENST00000471297 KIF14Q15058 1648 aa9□□□□□ -0.97
SMNDC1-204ENST00000471297 ABCC10Q5T3U5 1492 aa9□□□□□ -0.97
SMNDC1-204ENST00000471297 GPATCH8Q9UKJ3 1502 aaKnown RBP9□□□□□ -0.97
SMNDC1-204ENST00000471297 ARHGAP33O14559 1287 aa8.99□□□□□ -0.97
SMNDC1-204ENST00000471297 ZMYND10O75800 440 aa8.99□□□□□ -0.97
SMNDC1-204ENST00000471297 POTEEQ6S8J3 1075 aa8.99□□□□□ -0.97
SMNDC1-204ENST00000471297 AXIN2Q9Y2T1 843 aa8.99□□□□□ -0.97
SMNDC1-204ENST00000471297 ACIN1Q9UKV3 1341 aaKnown RBP8.99□□□□□ -0.97
SMNDC1-204ENST00000471297 GPR37O15354 613 aa8.98□□□□□ -0.97
SMNDC1-204ENST00000471297 COL9A1P20849 921 aa8.98□□□□□ -0.97
SMNDC1-204ENST00000471297 PSEN2P49810 448 aa8.98□□□□□ -0.97
SMNDC1-204ENST00000471297 HIC1Q14526 733 aa8.98□□□□□ -0.97
SMNDC1-204ENST00000471297 KCNK17Q96T54 332 aa8.98□□□□□ -0.97
SMNDC1-204ENST00000471297 ITSN2Q9NZM3 1697 aa8.97□□□□□ -0.97
SMNDC1-204ENST00000471297 GNPATO15228 680 aa8.97□□□□□ -0.97
SMNDC1-204ENST00000471297 RSPH4AQ5TD94 716 aa8.97□□□□□ -0.97
SMNDC1-204ENST00000471297 BARGINQ6ZT62 677 aa8.97□□□□□ -0.97
SMNDC1-204ENST00000471297 KCNH8Q96L42 1107 aa8.97□□□□□ -0.97
SMNDC1-204ENST00000471297 CLSPNQ9HAW4 1339 aa8.97□□□□□ -0.97
SMNDC1-204ENST00000471297 ZCCHC11Q5TAX3 1644 aaKnown RBP8.97□□□□□ -0.97
SMNDC1-204ENST00000471297 PPP1R3GB7ZBB8 358 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms