RNA–Protein interactions for RNA: ENST00000459159.1

SNORD54-201, Transcript of small nucleolar RNA, C/D box 54, humanhuman

BASIC

Gene SNORD54, Length 67 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD54-201ENST00000459159 CSMD2Q7Z408 3487 aa-0.46□□□□□ -2.48
SNORD54-201ENST00000459159 FBLP22087 321 aaKnown RBP-0.46□□□□□ -2.48
SNORD54-201ENST00000459159 SPG7Q9UQ90 795 aa-0.46□□□□□ -2.48
SNORD54-201ENST00000459159 ALMS1Q8TCU4 4167 aa-0.46□□□□□ -2.48
SNORD54-201ENST00000459159 LOC400499M0QZD8 3231 aa-0.47□□□□□ -2.48
SNORD54-201ENST00000459159 PCNTO95613 3336 aa-0.47□□□□□ -2.48
SNORD54-201ENST00000459159 KRTAP19-1Q8IUB9 90 aa-0.47□□□□□ -2.48
SNORD54-201ENST00000459159 SSUH2Q9Y2M2 353 aa-0.47□□□□□ -2.48
SNORD54-201ENST00000459159 ZC3H4Q9UPT8 1303 aaKnown RBP-0.47□□□□□ -2.48
SNORD54-201ENST00000459159 TPRP12270 2363 aaKnown RBP-0.47□□□□□ -2.49
SNORD54-201ENST00000459159 VPS13BQ7Z7G8 4022 aa-0.48□□□□□ -2.49
SNORD54-201ENST00000459159 SDK1Q7Z5N4 2213 aa-0.48□□□□□ -2.49
SNORD54-201ENST00000459159 SHISA5Q8N114 240 aa-0.48□□□□□ -2.49
SNORD54-201ENST00000459159 ERBB3P21860 1342 aa-0.48□□□□□ -2.49
SNORD54-201ENST00000459159 SVEP1Q4LDE5 3571 aa-0.48□□□□□ -2.49
SNORD54-201ENST00000459159 MUC17Q685J3 4493 aa-0.48□□□□□ -2.49
SNORD54-201ENST00000459159 LRBAP50851 2863 aa-0.48□□□□□ -2.49
SNORD54-201ENST00000459159 KRTAP1-4P0C5Y4 121 aa-0.49□□□□□ -2.49
SNORD54-201ENST00000459159 KRTAP19-4Q3LI73 84 aa-0.49□□□□□ -2.49
SNORD54-201ENST00000459159 ANKS1AQ92625 1134 aa-0.49□□□□□ -2.49
SNORD54-201ENST00000459159 PRRC2AP48634 2157 aaKnown RBP-0.49□□□□□ -2.49
SNORD54-201ENST00000459159 CELSR2Q9HCU4 2923 aa-0.49□□□□□ -2.49
SNORD54-201ENST00000459159 TRIOO75962 3097 aa-0.49□□□□□ -2.49
SNORD54-201ENST00000459159 SZT2Q5T011 3432 aa-0.5□□□□□ -2.49
SNORD54-201ENST00000459159 CENPEQ02224 2701 aa-0.5□□□□□ -2.49
SNORD54-201ENST00000459159 CRYBG3Q68DQ2 2970 aa-0.5□□□□□ -2.49
SNORD54-201ENST00000459159 PRB3Q04118 309 aaPredicted RBP-0.5□□□□□ -2.49
SNORD54-201ENST00000459159 KCTD2Q14681 263 aa-0.5□□□□□ -2.49
SNORD54-201ENST00000459159 COL13A1Q5TAT6 717 aaPredicted RBP-0.5□□□□□ -2.49
SNORD54-201ENST00000459159 POTEDQ86YR6 584 aa-0.5□□□□□ -2.49
SNORD54-201ENST00000459159 SERBP1Q8NC51 408 aaKnown RBP eCLIP-0.5□□□□□ -2.49
SNORD54-201ENST00000459159 FZD8Q9H461 694 aa-0.5□□□□□ -2.49
SNORD54-201ENST00000459159 PLSCR2Q9NRY7 297 aa-0.5□□□□□ -2.49
SNORD54-201ENST00000459159 CEP290O15078 2479 aa-0.51□□□□□ -2.49
SNORD54-201ENST00000459159 SPRR2DP22532 72 aa-0.51□□□□□ -2.49
SNORD54-201ENST00000459159 SLC51AQ86UW1 340 aa-0.51□□□□□ -2.49
SNORD54-201ENST00000459159 TMEM151BQ8IW70 566 aa-0.51□□□□□ -2.49
SNORD54-201ENST00000459159 PELP1Q8IZL8 1130 aaKnown RBP-0.51□□□□□ -2.49
SNORD54-201ENST00000459159 BMPERQ8N8U9 685 aa-0.51□□□□□ -2.49
SNORD54-201ENST00000459159 C5orf42Q9H799 3197 aa-0.51□□□□□ -2.49
SNORD54-201ENST00000459159 CHD7Q9P2D1 2997 aa-0.51□□□□□ -2.49
SNORD54-201ENST00000459159 LCE2BO14633 110 aa-0.52□□□□□ -2.49
SNORD54-201ENST00000459159 ERBB2P04626 1255 aa-0.52□□□□□ -2.49
SNORD54-201ENST00000459159 KRTAP10-1P60331 282 aa-0.52□□□□□ -2.49
SNORD54-201ENST00000459159 WNK2Q9Y3S1 2297 aa-0.52□□□□□ -2.49
SNORD54-201ENST00000459159 CFAP47Q6ZTR5 3102 aa-0.52□□□□□ -2.49
SNORD54-201ENST00000459159 APOBP04114 4563 aaKnown RBP-0.52□□□□□ -2.49
SNORD54-201ENST00000459159 POTECB2RU33 542 aa-0.53□□□□□ -2.49
SNORD54-201ENST00000459159 PPP1R11O60927 126 aaPredicted RBP-0.53□□□□□ -2.49
SNORD54-201ENST00000459159 ADAMTS4O75173 837 aa-0.53□□□□□ -2.49
SNORD54-201ENST00000459159 SPRR2EP22531 72 aa-0.53□□□□□ -2.49
SNORD54-201ENST00000459159 SPRR2BP35325 72 aa-0.53□□□□□ -2.49
SNORD54-201ENST00000459159 SPRR2AP35326 72 aa-0.53□□□□□ -2.49
SNORD54-201ENST00000459159 SNX27Q96L92 541 aa-0.53□□□□□ -2.49
SNORD54-201ENST00000459159 NTN4Q9HB63 628 aa-0.53□□□□□ -2.49
SNORD54-201ENST00000459159 WNK1Q9H4A3 2382 aa-0.53□□□□□ -2.49
SNORD54-201ENST00000459159 SOCS7O14512 581 aa-0.54□□□□□ -2.5
SNORD54-201ENST00000459159 CPSF6Q16630 551 aaKnown RBP eCLIP-0.54□□□□□ -2.5
SNORD54-201ENST00000459159 SPAG8Q99932 426 aaPredicted RBP-0.54□□□□□ -2.5
SNORD54-201ENST00000459159 COL25A1Q9BXS0 654 aaPredicted RBP-0.54□□□□□ -2.5
SNORD54-201ENST00000459159 ZNF282Q9UDV7 671 aaPredicted RBP-0.54□□□□□ -2.5
SNORD54-201ENST00000459159 RELNP78509 3460 aa-0.54□□□□□ -2.5
SNORD54-201ENST00000459159 PLECQ15149 4684 aaKnown RBP-0.55□□□□□ -2.5
SNORD54-201ENST00000459159 CEP350Q5VT06 3117 aa-0.55□□□□□ -2.5
SNORD54-201ENST00000459159 KRTAP19-7Q3SYF9 63 aa-0.55□□□□□ -2.5
SNORD54-201ENST00000459159 KRT35Q92764 455 aa-0.55□□□□□ -2.5
SNORD54-201ENST00000459159 RAPGEFL1Q9UHV5 662 aa-0.55□□□□□ -2.5
SNORD54-201ENST00000459159 TNFRSF18Q9Y5U5 241 aa-0.55□□□□□ -2.5
SNORD54-201ENST00000459159 DNAH5Q8TE73 4624 aa-0.55□□□□□ -2.5
SNORD54-201ENST00000459159 WDFY3Q8IZQ1 3526 aa-0.55□□□□□ -2.5
SNORD54-201ENST00000459159 PTPRZ1P23471 2315 aaPredicted RBP-0.55□□□□□ -2.5
SNORD54-201ENST00000459159 ADGRG4Q8IZF6 3080 aa-0.56□□□□□ -2.5
SNORD54-201ENST00000459159 DCHS2Q6V1P9 2916 aa-0.56□□□□□ -2.5
SNORD54-201ENST00000459159 CYSRT1A8MQ03 144 aa-0.56□□□□□ -2.5
SNORD54-201ENST00000459159 SNRPNP63162 240 aaKnown RBP-0.56□□□□□ -2.5
SNORD54-201ENST00000459159 TPRNQ4KMQ1 711 aa-0.56□□□□□ -2.5
SNORD54-201ENST00000459159 SCRT2Q9NQ03 307 aa-0.56□□□□□ -2.5
SNORD54-201ENST00000459159 COL3A1P02461 1466 aaPredicted RBP-0.56□□□□□ -2.5
SNORD54-201ENST00000459159 DNAH3Q8TD57 4116 aa-0.56□□□□□ -2.5
SNORD54-201ENST00000459159 F8P00451 2351 aa-0.57□□□□□ -2.5
SNORD54-201ENST00000459159 PRB2P02812 416 aaPredicted RBP-0.57□□□□□ -2.5
SNORD54-201ENST00000459159 SMCPP49901 116 aaPredicted RBP-0.57□□□□□ -2.5
SNORD54-201ENST00000459159 DDX50Q9BQ39 737 aaKnown RBP-0.57□□□□□ -2.5
SNORD54-201ENST00000459159 TMEM79Q9BSE2 394 aa-0.57□□□□□ -2.5
SNORD54-201ENST00000459159 STRN4Q9NRL3 753 aa-0.57□□□□□ -2.5
SNORD54-201ENST00000459159 CEP250Q9BV73 2442 aa-0.57□□□□□ -2.5
SNORD54-201ENST00000459159 VCANP13611 3396 aa-0.57□□□□□ -2.5
SNORD54-201ENST00000459159 PKHD1L1Q86WI1 4243 aa-0.58□□□□□ -2.5
SNORD54-201ENST00000459159 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.58□□□□□ -2.5
SNORD54-201ENST00000459159 ABCA4P78363 2273 aa-0.58□□□□□ -2.5
SNORD54-201ENST00000459159 PTGS2P35354 604 aa-0.58□□□□□ -2.5
SNORD54-201ENST00000459159 TCTN1Q2MV58 587 aa-0.58□□□□□ -2.5
SNORD54-201ENST00000459159 ZNF746Q6NUN9 644 aaPredicted RBP-0.58□□□□□ -2.5
SNORD54-201ENST00000459159 AEBP2Q6ZN18 517 aaPredicted RBP-0.58□□□□□ -2.5
SNORD54-201ENST00000459159 GRINAQ7Z429 371 aa-0.58□□□□□ -2.5
SNORD54-201ENST00000459159 GDF7Q7Z4P5 450 aa-0.58□□□□□ -2.5
SNORD54-201ENST00000459159 MDFIQ99750 246 aa-0.58□□□□□ -2.5
SNORD54-201ENST00000459159 EGFL7Q9UHF1 273 aa-0.58□□□□□ -2.5
SNORD54-201ENST00000459159 PPP6R1Q9UPN7 881 aa-0.58□□□□□ -2.5
SNORD54-201ENST00000459159 PKHD1P08F94 4074 aa-0.59□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms