RNA: ENST00000459159.1

SNORD54-201, Transcript of small nucleolar RNA, C/D box 54, humanhuman

BASIC

Gene SNORD54, Length 67 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD54-201ENST00000459159 SF3B4Q15427 424 aaKnown RBP eCLIP-1.14□□□□□ -2.591e-323■■■■□ 21.9
SNORD54-201ENST00000459159 NOLC1Q14978 699 aaKnown RBP eCLIP-1.39□□□□□ -2.631e-323■■■■■ 136.5
SNORD54-201ENST00000459159 DKC1O60832 514 aaKnown RBP eCLIP-2.07□□□□□ -2.741e-323■■■■□ 26.7
SNORD54-201ENST00000459159 TROVE2P10155 538 aaKnown RBP eCLIP-2.37□□□□□ -2.791e-323■■□□□ 13
SNORD54-201ENST00000459159 SMNDC1O75940 238 aaKnown RBP eCLIP-2.57□□□□□ -2.822e-69■■■■■ 35.4
SNORD54-201ENST00000459159 NIP7Q9Y221 180 aaKnown RBP eCLIP-2.56□□□□□ -2.822e-61■■■■■ 27.2
SNORD54-201ENST00000459159 PHF6Q8IWS0 365 aaKnown RBP eCLIP-1.45□□□□□ -2.642e-59■■□□□ 12.1
SNORD54-201ENST00000459159 LARP7Q4G0J3 582 aaKnown RBP eCLIP-2.6□□□□□ -2.831e-58■□□□□ 10.1
SNORD54-201ENST00000459159 EFTUD2Q15029 972 aaKnown RBP eCLIP-2.28□□□□□ -2.771e-44■■■□□ 15.9
SNORD54-201ENST00000459159 NOL12Q9UGY1 213 aaKnown RBP eCLIP-2.22□□□□□ -2.762e-34■□□□□ 8.8
SNORD54-201ENST00000459159 ZRANB2O95218 330 aaKnown RBP eCLIP-1.63□□□□□ -2.672e-32■□□□□ 10.3
SNORD54-201ENST00000459159 DDX21Q9NR30 783 aaKnown RBP eCLIP-1.25□□□□□ -2.612e-29■□□□□ 9.6
SNORD54-201ENST00000459159 TRA2AQ13595 282 aaKnown RBP eCLIP-0.69□□□□□ -2.522e-26■■□□□ 14.2
SNORD54-201ENST00000459159 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP-0.82□□□□□ -2.546e-24■■□□□ 11.6
SNORD54-201ENST00000459159 AATFQ9NY61 560 aaKnown RBP eCLIP-2.89□□□□□ -2.878e-21■■■■□ 22.3
SNORD54-201ENST00000459159 PTBP1P26599 531 aaKnown RBP eCLIP-2.3□□□□□ -2.781e-20■■■■□ 23.8
SNORD54-201ENST00000459159 UTP18Q9Y5J1 556 aaKnown RBP eCLIP-2.19□□□□□ -2.762e-16■□□□□ 8.6
SNORD54-201ENST00000459159 AARSP49588 968 aaKnown RBP eCLIP-2.28□□□□□ -2.771e-14■■□□□ 14
SNORD54-201ENST00000459159 SDAD1Q9NVU7 687 aaKnown RBP eCLIP-2.64□□□□□ -2.831e-14■□□□□ 8.1
SNORD54-201ENST00000459159 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP-1.36□□□□□ -2.632e-12■■■■■ 33
SNORD54-201ENST00000459159 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP-1.17□□□□□ -2.61e-7■□□□□ 9
SNORD54-201ENST00000459159 NIPBLQ6KC79 2804 aaeCLIP-0.39□□□□□ -2.471e-7■□□□□ 11.1
SNORD54-201ENST00000459159 HLTFQ14527 1009 aaKnown RBP eCLIP-2.15□□□□□ -2.753e-7■■□□□ 11.9
SNORD54-201ENST00000459159 WDR3Q9UNX4 943 aaKnown RBP eCLIP-2.35□□□□□ -2.794e-7■□□□□ 10.5
Retrieved 24 of 24 RNA–protein pairs in 6.9 ms