RNA–Protein interactions for RNA: ENST00000459159.1

SNORD54-201, Transcript of small nucleolar RNA, C/D box 54, humanhuman

BASIC

Gene SNORD54, Length 67 nt, Biotype snoRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD54-201ENST00000459159 SF3B4Q15427 424 aaKnown RBP eCLIP-1.14□□□□□ -2.591e-323■■■■□ 21.9
SNORD54-201ENST00000459159 NOLC1Q14978 699 aaKnown RBP eCLIP-1.39□□□□□ -2.631e-323■■■■■ 136.5
SNORD54-201ENST00000459159 DKC1O60832 514 aaKnown RBP eCLIP-2.07□□□□□ -2.741e-323■■■■□ 26.7
SNORD54-201ENST00000459159 TROVE2P10155 538 aaKnown RBP eCLIP-2.37□□□□□ -2.791e-323■■□□□ 13
SNORD54-201ENST00000459159 SMNDC1O75940 238 aaKnown RBP eCLIP-2.57□□□□□ -2.822e-69■■■■■ 35.4
SNORD54-201ENST00000459159 NIP7Q9Y221 180 aaKnown RBP eCLIP-2.56□□□□□ -2.822e-61■■■■■ 27.2
SNORD54-201ENST00000459159 PHF6Q8IWS0 365 aaKnown RBP eCLIP-1.45□□□□□ -2.642e-59■■□□□ 12.1
SNORD54-201ENST00000459159 LARP7Q4G0J3 582 aaKnown RBP eCLIP-2.6□□□□□ -2.831e-58■□□□□ 10.1
SNORD54-201ENST00000459159 EFTUD2Q15029 972 aaKnown RBP eCLIP-2.28□□□□□ -2.771e-44■■■□□ 15.9
SNORD54-201ENST00000459159 NOL12Q9UGY1 213 aaKnown RBP eCLIP-2.22□□□□□ -2.762e-34■□□□□ 8.8
SNORD54-201ENST00000459159 ZRANB2O95218 330 aaKnown RBP eCLIP-1.63□□□□□ -2.672e-32■□□□□ 10.3
SNORD54-201ENST00000459159 DDX21Q9NR30 783 aaKnown RBP eCLIP-1.25□□□□□ -2.612e-29■□□□□ 9.6
SNORD54-201ENST00000459159 TRA2AQ13595 282 aaKnown RBP eCLIP-0.69□□□□□ -2.522e-26■■□□□ 14.2
SNORD54-201ENST00000459159 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP-0.82□□□□□ -2.546e-24■■□□□ 11.6
SNORD54-201ENST00000459159 AATFQ9NY61 560 aaKnown RBP eCLIP-2.89□□□□□ -2.878e-21■■■■□ 22.3
SNORD54-201ENST00000459159 PTBP1P26599 531 aaKnown RBP eCLIP-2.3□□□□□ -2.781e-20■■■■□ 23.8
SNORD54-201ENST00000459159 UTP18Q9Y5J1 556 aaKnown RBP eCLIP-2.19□□□□□ -2.762e-16■□□□□ 8.6
SNORD54-201ENST00000459159 AARSP49588 968 aaKnown RBP eCLIP-2.28□□□□□ -2.771e-14■■□□□ 14
SNORD54-201ENST00000459159 SDAD1Q9NVU7 687 aaKnown RBP eCLIP-2.64□□□□□ -2.831e-14■□□□□ 8.1
SNORD54-201ENST00000459159 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP-1.36□□□□□ -2.632e-12■■■■■ 33
SNORD54-201ENST00000459159 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP-1.17□□□□□ -2.61e-7■□□□□ 9
SNORD54-201ENST00000459159 NIPBLQ6KC79 2804 aaeCLIP-0.39□□□□□ -2.471e-7■□□□□ 11.1
SNORD54-201ENST00000459159 HLTFQ14527 1009 aaKnown RBP eCLIP-2.15□□□□□ -2.753e-7■■□□□ 11.9
SNORD54-201ENST00000459159 WDR3Q9UNX4 943 aaKnown RBP eCLIP-2.35□□□□□ -2.794e-7■□□□□ 10.5
Retrieved 24 of 24 RNA–protein pairs in 9.2 ms