RNA–Protein interactions for RNA: ENST00000401874.6

TSC2-204, Transcript of TSC complex subunit 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSC2, Length 5,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-204ENST00000401874 ISY1Q9ULR0 285 aaKnown RBP20.52■□□□□ 0.88
TSC2-204ENST00000401874 H3BQV1 296 aa20.52■□□□□ 0.87
TSC2-204ENST00000401874 IFFO2Q5TF58 517 aa20.52■□□□□ 0.87
TSC2-204ENST00000401874 MINK1Q8N4C8 1332 aaPredicted RBP20.51■□□□□ 0.87
TSC2-204ENST00000401874 RUFY2Q8WXA3 655 aa20.51■□□□□ 0.87
TSC2-204ENST00000401874 DIAPH3Q9NSV4 1193 aa20.5■□□□□ 0.87
TSC2-204ENST00000401874 NCAPD3P42695 1498 aa20.5■□□□□ 0.87
TSC2-204ENST00000401874 NFKBIBQ15653 356 aa20.5■□□□□ 0.87
TSC2-204ENST00000401874 C22orf23Q9BZE7 217 aa20.49■□□□□ 0.87
TSC2-204ENST00000401874 SYNJ1O43426 1573 aa20.49■□□□□ 0.87
TSC2-204ENST00000401874 TRHP20396 242 aaPredicted RBP20.49■□□□□ 0.87
TSC2-204ENST00000401874 NUCB2P80303 420 aa20.49■□□□□ 0.87
TSC2-204ENST00000401874 EFCAB5A4FU69 1503 aa20.49■□□□□ 0.87
TSC2-204ENST00000401874 FAM184AQ8NB25 1140 aa20.48■□□□□ 0.87
TSC2-204ENST00000401874 GNAI1P63096 354 aa20.48■□□□□ 0.87
TSC2-204ENST00000401874 INTS3Q68E01 1043 aaKnown RBP20.48■□□□□ 0.87
TSC2-204ENST00000401874 GOLGA6L19H0YKK7 550 aa20.47■□□□□ 0.87
TSC2-204ENST00000401874 GOLGA6L1Q8N7Z2 621 aa20.47■□□□□ 0.87
TSC2-204ENST00000401874 ADAMTS8Q9UP79 889 aa20.47■□□□□ 0.87
TSC2-204ENST00000401874 NUTM2FA1L443 756 aa20.46■□□□□ 0.87
TSC2-204ENST00000401874 EHBP1L1Q8N3D4 1523 aa20.45■□□□□ 0.86
TSC2-204ENST00000401874 PRDM2Q13029 1718 aa20.45■□□□□ 0.86
TSC2-204ENST00000401874 ZKSCAN1P17029 563 aaPredicted RBP20.45■□□□□ 0.86
TSC2-204ENST00000401874 PANK1Q8TE04 598 aa20.45■□□□□ 0.86
TSC2-204ENST00000401874 C1orf141Q5JVX7 400 aa20.44■□□□□ 0.86
TSC2-204ENST00000401874 PRXQ9BXM0 1461 aa20.44■□□□□ 0.86
TSC2-204ENST00000401874 BECN2A8MW95 431 aa20.44■□□□□ 0.86
TSC2-204ENST00000401874 HFM1A2PYH4 1435 aa20.43■□□□□ 0.86
TSC2-204ENST00000401874 CLSTN1O94985 981 aa20.42■□□□□ 0.86
TSC2-204ENST00000401874 TPM3P06753 285 aa20.42■□□□□ 0.86
TSC2-204ENST00000401874 TEFQ10587 303 aa20.42■□□□□ 0.86
TSC2-204ENST00000401874 RASSF8Q8NHQ8 419 aa20.42■□□□□ 0.86
TSC2-204ENST00000401874 LNPKQ9C0E8 428 aa20.42■□□□□ 0.86
TSC2-204ENST00000401874 CFTRP13569 1480 aa20.42■□□□□ 0.86
TSC2-204ENST00000401874 LRRFIP1Q32MZ4 808 aaKnown RBP20.41■□□□□ 0.86
TSC2-204ENST00000401874 FOXD4L6Q3SYB3 417 aaPredicted RBP20.41■□□□□ 0.86
TSC2-204ENST00000401874 FOXD4L3Q6VB84 417 aaPredicted RBP20.41■□□□□ 0.86
TSC2-204ENST00000401874 NOC3LQ8WTT2 800 aaKnown RBP20.41■□□□□ 0.86
TSC2-204ENST00000401874 PPP2R1AP30153 589 aa20.41■□□□□ 0.86
TSC2-204ENST00000401874 CDC45O75419 566 aa20.4■□□□□ 0.86
TSC2-204ENST00000401874 SMG6Q86US8 1419 aaKnown RBP20.4■□□□□ 0.86
TSC2-204ENST00000401874 NEXNQ0ZGT2 675 aa20.4■□□□□ 0.86
TSC2-204ENST00000401874 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.4■□□□□ 0.86
TSC2-204ENST00000401874 TIAM1Q13009 1591 aa20.4■□□□□ 0.86
TSC2-204ENST00000401874 TNNT3P45378 269 aaPredicted RBP20.4■□□□□ 0.86
TSC2-204ENST00000401874 CDCA7LQ96GN5 454 aa20.4■□□□□ 0.86
TSC2-204ENST00000401874 TOMM22Q9NS69 142 aa20.4■□□□□ 0.86
TSC2-204ENST00000401874 SCAPERQ9BY12 1400 aa20.39■□□□□ 0.86
TSC2-204ENST00000401874 KIAA1107Q9UPP5 1409 aa20.39■□□□□ 0.86
TSC2-204ENST00000401874 ANO2Q9NQ90 1003 aa20.39■□□□□ 0.85
TSC2-204ENST00000401874 C9orf78Q9NZ63 289 aaPredicted RBP20.39■□□□□ 0.85
TSC2-204ENST00000401874 MRE11P49959 708 aa20.39■□□□□ 0.85
TSC2-204ENST00000401874 IFIT2P09913 472 aaKnown RBP20.38■□□□□ 0.85
TSC2-204ENST00000401874 PDE3AQ14432 1141 aa20.38■□□□□ 0.85
TSC2-204ENST00000401874 TOP2BQ02880 1626 aa20.37■□□□□ 0.85
TSC2-204ENST00000401874 RNF20Q5VTR2 975 aa20.37■□□□□ 0.85
TSC2-204ENST00000401874 HSP90AB4PQ58FF6 505 aa20.37■□□□□ 0.85
TSC2-204ENST00000401874 AMER1Q5JTC6 1135 aaPredicted RBP20.36■□□□□ 0.85
TSC2-204ENST00000401874 FKBP5Q13451 457 aaPredicted RBP20.36■□□□□ 0.85
TSC2-204ENST00000401874 FAM43AQ8N2R8 423 aa20.36■□□□□ 0.85
TSC2-204ENST00000401874 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.35■□□□□ 0.854e-9■■■■■ 33.2
TSC2-204ENST00000401874 NINLQ9Y2I6 1382 aa20.35■□□□□ 0.85
TSC2-204ENST00000401874 MCTP1Q6DN14 999 aa20.35■□□□□ 0.85
TSC2-204ENST00000401874 AKNAQ7Z591 1439 aa20.35■□□□□ 0.85
TSC2-204ENST00000401874 TCP11L2Q8N4U5 519 aa20.35■□□□□ 0.85
TSC2-204ENST00000401874 EIF2S2P20042 333 aaKnown RBP20.35■□□□□ 0.85
TSC2-204ENST00000401874 CPLX2Q6PUV4 134 aaKnown RBP20.35■□□□□ 0.85
TSC2-204ENST00000401874 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.34■□□□□ 0.85
TSC2-204ENST00000401874 PNISRQ8TF01 805 aaKnown RBP20.34■□□□□ 0.85
TSC2-204ENST00000401874 SMC3Q9UQE7 1217 aa20.34■□□□□ 0.85
TSC2-204ENST00000401874 DDX58O95786 925 aaKnown RBP20.33■□□□□ 0.85
TSC2-204ENST00000401874 CREBRFQ8IUR6 639 aa20.33■□□□□ 0.85
TSC2-204ENST00000401874 NBPF8Q3BBV2 869 aa20.33■□□□□ 0.85
TSC2-204ENST00000401874 GRIN2BQ13224 1484 aa20.33■□□□□ 0.84
TSC2-204ENST00000401874 AQRO60306 1485 aaKnown RBP eCLIP20.33■□□□□ 0.841e-6■■■■■ 28.4
TSC2-204ENST00000401874 MTHFSP49914 203 aa20.32■□□□□ 0.84
TSC2-204ENST00000401874 TPD52L1Q16890 204 aaPredicted RBP20.32■□□□□ 0.84
TSC2-204ENST00000401874 GGNBP2Q9H3C7 697 aa20.32■□□□□ 0.84
TSC2-204ENST00000401874 ERC2O15083 957 aa20.32■□□□□ 0.84
TSC2-204ENST00000401874 TSPYL4Q9UJ04 414 aa20.32■□□□□ 0.84
TSC2-204ENST00000401874 ARHGAP5Q13017 1502 aa20.32■□□□□ 0.84
TSC2-204ENST00000401874 SYNE3Q6ZMZ3 975 aa20.32■□□□□ 0.84
TSC2-204ENST00000401874 TPM1P09493 284 aa20.31■□□□□ 0.84
TSC2-204ENST00000401874 BACH2Q9BYV9 841 aa20.31■□□□□ 0.84
TSC2-204ENST00000401874 WDR97A6NE52 1622 aa20.31■□□□□ 0.84
TSC2-204ENST00000401874 G3BP1Q13283 466 aaKnown RBP eCLIP20.31■□□□□ 0.84
TSC2-204ENST00000401874 AKAP17AQ02040 695 aaKnown RBP20.31■□□□□ 0.84
TSC2-204ENST00000401874 TTC5Q8N0Z6 440 aa20.31■□□□□ 0.84
TSC2-204ENST00000401874 PDZRN3Q9UPQ7 1066 aa20.31■□□□□ 0.84
TSC2-204ENST00000401874 TSR1Q2NL82 804 aaKnown RBP20.3■□□□□ 0.84
TSC2-204ENST00000401874 BICD2Q8TD16 824 aa20.3■□□□□ 0.84
TSC2-204ENST00000401874 TMX4Q9H1E5 349 aaPredicted RBP20.3■□□□□ 0.84
TSC2-204ENST00000401874 HMOX1P09601 288 aa20.3■□□□□ 0.84
TSC2-204ENST00000401874 VSIG10Q8N0Z9 540 aa20.29■□□□□ 0.84
TSC2-204ENST00000401874 TRAK2O60296 914 aa20.29■□□□□ 0.84
TSC2-204ENST00000401874 CCDC9Q9Y3X0 531 aaKnown RBP20.29■□□□□ 0.84
TSC2-204ENST00000401874 CABP2Q9NPB3 220 aa20.28■□□□□ 0.84
TSC2-204ENST00000401874 C9orf84Q5VXU9 1444 aa20.28■□□□□ 0.84
TSC2-204ENST00000401874 HECW1Q76N89 1606 aa20.28■□□□□ 0.84
TSC2-204ENST00000401874 A0A0U1RQG5 324 aaPredicted RBP20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms