RNA–Protein interactions for RNA: ENSMUST00000103059.1

Col9a3-201, Transcript of Collagen, type IX, alpha 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col9a3, Length 2,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a3-201ENSMUST00000103059 Tcerg1Q8CGF7 1100 aaKnown RBP17.53■□□□□ 0.4
Col9a3-201ENSMUST00000103059 Mak16Q8BGS0 296 aaKnown RBP17.52■□□□□ 0.4
Col9a3-201ENSMUST00000103059 Tulp4Q9JIL5 1547 aa17.52■□□□□ 0.4
Col9a3-201ENSMUST00000103059 Gapvd1Q6PAR5 1458 aa17.52■□□□□ 0.39
Col9a3-201ENSMUST00000103059 Setd1aE9PYH6 1716 aa17.51■□□□□ 0.39
Col9a3-201ENSMUST00000103059 Ylpm1Q9R0I7 1386 aaKnown RBP17.5■□□□□ 0.39
Col9a3-201ENSMUST00000103059 PtprtQ99M80 1454 aa17.5■□□□□ 0.39
Col9a3-201ENSMUST00000103059 Kcnh8P59111 1102 aa17.49■□□□□ 0.39
Col9a3-201ENSMUST00000103059 Zfp444Q3TDV8 331 aaKnown RBP17.49■□□□□ 0.39
Col9a3-201ENSMUST00000103059 Ttc21bQ0HA38 1315 aa17.48■□□□□ 0.39
Col9a3-201ENSMUST00000103059 Iqcf3Q9D498 203 aa17.48■□□□□ 0.39
Col9a3-201ENSMUST00000103059 Abcc6Q9R1S7 1498 aa17.48■□□□□ 0.39
Col9a3-201ENSMUST00000103059 Srpk2O54781 681 aaKnown RBP17.48■□□□□ 0.39
Col9a3-201ENSMUST00000103059 Fan1Q69ZT1 1020 aa17.48■□□□□ 0.39
Col9a3-201ENSMUST00000103059 Xrn1P97789 1719 aaKnown RBP17.47■□□□□ 0.39
Col9a3-201ENSMUST00000103059 Prdm10Q3UTQ7 1184 aa17.47■□□□□ 0.39
Col9a3-201ENSMUST00000103059 Pknox2Q8BG99 474 aa17.46■□□□□ 0.39
Col9a3-201ENSMUST00000103059 ErbinQ80TH2 1402 aa17.45■□□□□ 0.38
Col9a3-201ENSMUST00000103059 Zfyve16Q80U44 1528 aa17.45■□□□□ 0.38
Col9a3-201ENSMUST00000103059 Abca17E9PX95 1733 aa17.45■□□□□ 0.38
Col9a3-201ENSMUST00000103059 Esx1O88933 382 aa17.45■□□□□ 0.38
Col9a3-201ENSMUST00000103059 Fam184bQ0KK56 942 aa17.45■□□□□ 0.38
Col9a3-201ENSMUST00000103059 Gtf2e1Q9D0D5 440 aa17.44■□□□□ 0.38
Col9a3-201ENSMUST00000103059 Tubgcp6G5E8P0 1769 aa17.44■□□□□ 0.38
Col9a3-201ENSMUST00000103059 Usp40Q8BWR4 1235 aa17.43■□□□□ 0.38
Col9a3-201ENSMUST00000103059 Nos1Q9Z0J4 1429 aa17.42■□□□□ 0.38
Col9a3-201ENSMUST00000103059 Erbb3Q61526 1339 aa17.42■□□□□ 0.38
Col9a3-201ENSMUST00000103059 4933416C03RikQ3V063 378 aa17.42■□□□□ 0.38
Col9a3-201ENSMUST00000103059 Ipo4Q8VI75 1082 aa17.42■□□□□ 0.38
Col9a3-201ENSMUST00000103059 Abca9Q8K449 1623 aa17.41■□□□□ 0.38
Col9a3-201ENSMUST00000103059 Ppp2r1aQ76MZ3 589 aa17.4■□□□□ 0.38
Col9a3-201ENSMUST00000103059 Myo5cE9Q1F5 1742 aa17.4■□□□□ 0.38
Col9a3-201ENSMUST00000103059 CrbnQ8C7D2 445 aa17.39■□□□□ 0.38
Col9a3-201ENSMUST00000103059 DaxxO35613 739 aa17.39■□□□□ 0.37
Col9a3-201ENSMUST00000103059 NeflP08551 543 aa17.39■□□□□ 0.37
Col9a3-201ENSMUST00000103059 Kank1E9Q238 1360 aa17.38■□□□□ 0.37
Col9a3-201ENSMUST00000103059 Sbno1Q689Z5 1390 aa17.38■□□□□ 0.37
Col9a3-201ENSMUST00000103059 Zmym4A2A791 1549 aaKnown RBP17.37■□□□□ 0.37
Col9a3-201ENSMUST00000103059 Cnga1P29974 684 aa17.37■□□□□ 0.37
Col9a3-201ENSMUST00000103059 Znf518aB2RRF6 1478 aaKnown RBP17.37■□□□□ 0.37
Col9a3-201ENSMUST00000103059 Dcaf11Q91VU6 549 aa17.37■□□□□ 0.37
Col9a3-201ENSMUST00000103059 Nlrp6Q91WS2 869 aa17.37■□□□□ 0.37
Col9a3-201ENSMUST00000103059 Abca6Q8K441 1624 aa17.36■□□□□ 0.37
Col9a3-201ENSMUST00000103059 Gm16486A0A1D5RMD1 1434 aa17.36■□□□□ 0.37
Col9a3-201ENSMUST00000103059 Plch2A2AP18 1501 aa17.35■□□□□ 0.37
Col9a3-201ENSMUST00000103059 ChgaP26339 463 aaKnown RBP17.35■□□□□ 0.37
Col9a3-201ENSMUST00000103059 Pabpn1Q8CCS6 302 aaKnown RBP17.35■□□□□ 0.37
Col9a3-201ENSMUST00000103059 AnkarA2RT91 1465 aa17.35■□□□□ 0.37
Col9a3-201ENSMUST00000103059 Uggt2E9Q4X2 1504 aa17.35■□□□□ 0.37
Col9a3-201ENSMUST00000103059 Kif7B7ZNG0 1348 aa17.35■□□□□ 0.37
Col9a3-201ENSMUST00000103059 Rab3gap2Q8BMG7 1366 aa17.34■□□□□ 0.37
Col9a3-201ENSMUST00000103059 OvosQ3UU35 1456 aa17.34■□□□□ 0.37
Col9a3-201ENSMUST00000103059 AatkQ80YE4 1365 aa17.33■□□□□ 0.37
Col9a3-201ENSMUST00000103059 Tex14Q7M6U3 1450 aa17.33■□□□□ 0.37
Col9a3-201ENSMUST00000103059 Puf60Q3UEB3 564 aaKnown RBP17.32■□□□□ 0.36
Col9a3-201ENSMUST00000103059 Stard8Q8K031 1019 aa17.31■□□□□ 0.36
Col9a3-201ENSMUST00000103059 Ptch1Q61115 1434 aa17.31■□□□□ 0.36
Col9a3-201ENSMUST00000103059 Fndc1E9Q043 1732 aa17.31■□□□□ 0.36
Col9a3-201ENSMUST00000103059 Stag3O70576 1240 aa17.3■□□□□ 0.36
Col9a3-201ENSMUST00000103059 Myo3aQ8K3H5 1613 aa17.3■□□□□ 0.36
Col9a3-201ENSMUST00000103059 Kif16bB1AVY7 1312 aa17.3■□□□□ 0.36
Col9a3-201ENSMUST00000103059 Iqgap3F8VQ29 1632 aa17.3■□□□□ 0.36
Col9a3-201ENSMUST00000103059 Arid4bA2CG63 1314 aaKnown RBP17.29■□□□□ 0.36
Col9a3-201ENSMUST00000103059 Pola1P33609 1465 aa17.29■□□□□ 0.36
Col9a3-201ENSMUST00000103059 Neurod2Q62414 383 aa17.28■□□□□ 0.36
Col9a3-201ENSMUST00000103059 Gli2Q0VGT2 1544 aa17.27■□□□□ 0.36
Col9a3-201ENSMUST00000103059 Prex1Q69ZK0 1650 aa17.26■□□□□ 0.35
Col9a3-201ENSMUST00000103059 Speer4f1Q9D5Q6 258 aa17.26■□□□□ 0.35
Col9a3-201ENSMUST00000103059 Atp1b4Q99ME6 356 aa17.25■□□□□ 0.35
Col9a3-201ENSMUST00000103059 Apbb1Q9QXJ1 710 aa17.25■□□□□ 0.35
Col9a3-201ENSMUST00000103059 Col17a1Q07563 1470 aa17.25■□□□□ 0.35
Col9a3-201ENSMUST00000103059 Cep152A2AUM9 1736 aaKnown RBP17.25■□□□□ 0.35
Col9a3-201ENSMUST00000103059 Mink1Q9JM52 1308 aa17.25■□□□□ 0.35
Col9a3-201ENSMUST00000103059 Gm156Q58A37 223 aa17.24■□□□□ 0.35
Col9a3-201ENSMUST00000103059 Tmem131lQ3U3D7 1597 aa17.24■□□□□ 0.35
Col9a3-201ENSMUST00000103059 Nphp4P59240 1425 aa17.23■□□□□ 0.35
Col9a3-201ENSMUST00000103059 Itsn2Q9Z0R6 1659 aa17.23■□□□□ 0.35
Col9a3-201ENSMUST00000103059 Rims1Q99NE5 1463 aa17.22■□□□□ 0.35
Col9a3-201ENSMUST00000103059 Abca8aQ8K442 1620 aa17.22■□□□□ 0.35
Col9a3-201ENSMUST00000103059 IqubQ8CDK3 788 aa17.21■□□□□ 0.35
Col9a3-201ENSMUST00000103059 Prkrip1Q9CWV6 186 aaKnown RBP17.2■□□□□ 0.34
Col9a3-201ENSMUST00000103059 Kcnn1Q9EQR3 537 aa17.2■□□□□ 0.34
Col9a3-201ENSMUST00000103059 AU022751B1B0V2 589 aa17.2■□□□□ 0.34
Col9a3-201ENSMUST00000103059 Golga2Q921M4 999 aa17.2■□□□□ 0.34
Col9a3-201ENSMUST00000103059 Stk26Q99JT2 416 aa17.2■□□□□ 0.34
Col9a3-201ENSMUST00000103059 Adgrb3Q80ZF8 1522 aa17.2■□□□□ 0.34
Col9a3-201ENSMUST00000103059 Atf7ipQ7TT18 1306 aa17.2■□□□□ 0.34
Col9a3-201ENSMUST00000103059 Kdm5aQ3UXZ9 1690 aa17.2■□□□□ 0.34
Col9a3-201ENSMUST00000103059 Ak9G3UYQ4 1894 aa17.2■□□□□ 0.34
Col9a3-201ENSMUST00000103059 Rwdd1Q9CQK7 243 aa17.2■□□□□ 0.34
Col9a3-201ENSMUST00000103059 Topbp1Q6ZQF0 1515 aa17.19■□□□□ 0.34
Col9a3-201ENSMUST00000103059 Cdk5rap2Q8K389 1822 aa17.18■□□□□ 0.34
Col9a3-201ENSMUST00000103059 Atp10aO54827 1508 aa17.18■□□□□ 0.34
Col9a3-201ENSMUST00000103059 Nkx1-2P42580 305 aa17.16■□□□□ 0.34
Col9a3-201ENSMUST00000103059 Ccdc30Q8BVF4 654 aa17.16■□□□□ 0.34
Col9a3-201ENSMUST00000103059 CanxP35564 591 aaKnown RBP17.16■□□□□ 0.34
Col9a3-201ENSMUST00000103059 Ehbp1l1Q99MS7 1716 aa17.16■□□□□ 0.34
Col9a3-201ENSMUST00000103059 Depdc5P61460 1591 aa17.15■□□□□ 0.34
Col9a3-201ENSMUST00000103059 Myom2Q14BI5 1463 aa17.14■□□□□ 0.33
Col9a3-201ENSMUST00000103059 Plekhh1Q80TI1 1356 aa17.14■□□□□ 0.33
Retrieved 100 of 22,080 RNA–protein pairs in 32.5 ms