RNA–Protein interactions for RNA: ENSMUST00000052747.3

Nhlrc1-201, Transcript of E3 ubiquitin-protein ligase NHLRC1, mousemouse

APPRIS P1 BASIC

Gene Nhlrc1, Length 2,294 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc1-201ENSMUST00000052747 Gm16486A0A1D5RMD1 1434 aa31■■■□□ 2.55
Nhlrc1-201ENSMUST00000052747 Pola1P33609 1465 aa30.98■■■□□ 2.55
Nhlrc1-201ENSMUST00000052747 Ylpm1Q9R0I7 1386 aaKnown RBP30.98■■■□□ 2.55
Nhlrc1-201ENSMUST00000052747 Esx1O88933 382 aa30.98■■■□□ 2.55
Nhlrc1-201ENSMUST00000052747 Uggt2E9Q4X2 1504 aa30.97■■■□□ 2.55
Nhlrc1-201ENSMUST00000052747 Ppp2r1aQ76MZ3 589 aa30.97■■■□□ 2.55
Nhlrc1-201ENSMUST00000052747 Fam184bQ0KK56 942 aa30.95■■■□□ 2.55
Nhlrc1-201ENSMUST00000052747 Prkrip1Q9CWV6 186 aaKnown RBP30.95■■■□□ 2.55
Nhlrc1-201ENSMUST00000052747 Kif3bQ61771 747 aa30.94■■■□□ 2.54
Nhlrc1-201ENSMUST00000052747 AnkarA2RT91 1465 aa30.93■■■□□ 2.54
Nhlrc1-201ENSMUST00000052747 Igf1rQ60751 1373 aa30.93■■■□□ 2.54
Nhlrc1-201ENSMUST00000052747 Os9Q8K2C7 672 aa30.93■■■□□ 2.54
Nhlrc1-201ENSMUST00000052747 Rab3gap2Q8BMG7 1366 aa30.91■■■□□ 2.54
Nhlrc1-201ENSMUST00000052747 Myo5cE9Q1F5 1742 aa30.9■■■□□ 2.54
Nhlrc1-201ENSMUST00000052747 Kif16bB1AVY7 1312 aa30.9■■■□□ 2.54
Nhlrc1-201ENSMUST00000052747 Gm20521D3Z5F7 333 aa30.88■■■□□ 2.53
Nhlrc1-201ENSMUST00000052747 CrbnQ8C7D2 445 aa30.88■■■□□ 2.53
Nhlrc1-201ENSMUST00000052747 Zfyve16Q80U44 1528 aa30.87■■■□□ 2.53
Nhlrc1-201ENSMUST00000052747 Ipo9Q91YE6 1041 aa30.86■■■□□ 2.53
Nhlrc1-201ENSMUST00000052747 TnikP83510 1323 aa30.86■■■□□ 2.53
Nhlrc1-201ENSMUST00000052747 Nos1Q9Z0J4 1429 aa30.85■■■□□ 2.53
Nhlrc1-201ENSMUST00000052747 Itsn2Q9Z0R6 1659 aa30.84■■■□□ 2.53
Nhlrc1-201ENSMUST00000052747 Ttc21bQ0HA38 1315 aa30.84■■■□□ 2.53
Nhlrc1-201ENSMUST00000052747 ErbinQ80TH2 1402 aa30.83■■■□□ 2.53
Nhlrc1-201ENSMUST00000052747 Stk24Q99KH8 431 aa30.82■■■□□ 2.52
Nhlrc1-201ENSMUST00000052747 Clasp1Q80TV8 1535 aaKnown RBP30.82■■■□□ 2.52
Nhlrc1-201ENSMUST00000052747 Atf7ipQ7TT18 1306 aa30.82■■■□□ 2.52
Nhlrc1-201ENSMUST00000052747 Ttc41Q692V3 1318 aa30.81■■■□□ 2.52
Nhlrc1-201ENSMUST00000052747 Ak9G3UYQ4 1894 aa30.8■■■□□ 2.52
Nhlrc1-201ENSMUST00000052747 Gtf2e1Q9D0D5 440 aa30.8■■■□□ 2.52
Nhlrc1-201ENSMUST00000052747 Abca9Q8K449 1623 aa30.8■■■□□ 2.52
Nhlrc1-201ENSMUST00000052747 Ythdc2B2RR83 1445 aaKnown RBP30.79■■■□□ 2.52
Nhlrc1-201ENSMUST00000052747 Abca6Q8K441 1624 aa30.78■■■□□ 2.52
Nhlrc1-201ENSMUST00000052747 Lemd3Q9WU40 921 aa30.78■■■□□ 2.52
Nhlrc1-201ENSMUST00000052747 Fndc1E9Q043 1732 aa30.78■■■□□ 2.52
Nhlrc1-201ENSMUST00000052747 Cep152A2AUM9 1736 aaKnown RBP30.77■■■□□ 2.52
Nhlrc1-201ENSMUST00000052747 Col17a1Q07563 1470 aa30.77■■■□□ 2.52
Nhlrc1-201ENSMUST00000052747 Tmem131lQ3U3D7 1597 aa30.76■■■□□ 2.52
Nhlrc1-201ENSMUST00000052747 Kif7B7ZNG0 1348 aa30.76■■■□□ 2.51
Nhlrc1-201ENSMUST00000052747 Iqgap3F8VQ29 1632 aa30.76■■■□□ 2.51
Nhlrc1-201ENSMUST00000052747 Znf518aB2RRF6 1478 aaKnown RBP30.75■■■□□ 2.51
Nhlrc1-201ENSMUST00000052747 Srpk2O54781 681 aaKnown RBP30.75■■■□□ 2.51
Nhlrc1-201ENSMUST00000052747 Usp40Q8BWR4 1235 aa30.75■■■□□ 2.51
Nhlrc1-201ENSMUST00000052747 Fan1Q69ZT1 1020 aa30.74■■■□□ 2.51
Nhlrc1-201ENSMUST00000052747 Mbd3Q9Z2D8 285 aaKnown RBP30.73■■■□□ 2.51
Nhlrc1-201ENSMUST00000052747 Arid3cA6PWV5 409 aa30.73■■■□□ 2.51
Nhlrc1-201ENSMUST00000052747 Bcl11aQ9QYE3 773 aa30.72■■■□□ 2.51
Nhlrc1-201ENSMUST00000052747 Myo3aQ8K3H5 1613 aa30.72■■■□□ 2.51
Nhlrc1-201ENSMUST00000052747 Stard8Q8K031 1019 aa30.71■■■□□ 2.51
Nhlrc1-201ENSMUST00000052747 Nlrp6Q91WS2 869 aa30.71■■■□□ 2.51
Nhlrc1-201ENSMUST00000052747 Kdm5aQ3UXZ9 1690 aa30.7■■■□□ 2.51
Nhlrc1-201ENSMUST00000052747 Plekhh1Q80TI1 1356 aa30.69■■■□□ 2.5
Nhlrc1-201ENSMUST00000052747 Abca8aQ8K442 1620 aa30.68■■■□□ 2.5
Nhlrc1-201ENSMUST00000052747 Dcaf11Q91VU6 549 aa30.68■■■□□ 2.5
Nhlrc1-201ENSMUST00000052747 Rwdd1Q9CQK7 243 aa30.68■■■□□ 2.5
Nhlrc1-201ENSMUST00000052747 Rims1Q99NE5 1463 aa30.68■■■□□ 2.5
Nhlrc1-201ENSMUST00000052747 Nphp4P59240 1425 aa30.67■■■□□ 2.5
Nhlrc1-201ENSMUST00000052747 AatkQ80YE4 1365 aa30.67■■■□□ 2.5
Nhlrc1-201ENSMUST00000052747 PtprtQ99M80 1454 aa30.67■■■□□ 2.5
Nhlrc1-201ENSMUST00000052747 Speer4f1Q9D5Q6 258 aa30.65■■■□□ 2.5
Nhlrc1-201ENSMUST00000052747 Ttll13A4Q9F6 804 aa30.64■■■□□ 2.5
Nhlrc1-201ENSMUST00000052747 Usp19Q3UJD6 1360 aa30.63■■■□□ 2.49
Nhlrc1-201ENSMUST00000052747 Ccdc27Q3V036 639 aa30.62■■■□□ 2.49
Nhlrc1-201ENSMUST00000052747 Prex1Q69ZK0 1650 aa30.61■■■□□ 2.49
Nhlrc1-201ENSMUST00000052747 Cdk5rap2Q8K389 1822 aa30.61■■■□□ 2.49
Nhlrc1-201ENSMUST00000052747 Adgrb3Q80ZF8 1522 aa30.59■■■□□ 2.49
Nhlrc1-201ENSMUST00000052747 Neurod2Q62414 383 aa30.58■■■□□ 2.49
Nhlrc1-201ENSMUST00000052747 Kdm2bQ6P1G2 1309 aa30.58■■■□□ 2.49
Nhlrc1-201ENSMUST00000052747 Ccdc30Q8BVF4 654 aa30.58■■■□□ 2.49
Nhlrc1-201ENSMUST00000052747 Apbb1Q9QXJ1 710 aa30.57■■■□□ 2.48
Nhlrc1-201ENSMUST00000052747 Topbp1Q6ZQF0 1515 aa30.56■■■□□ 2.48
Nhlrc1-201ENSMUST00000052747 Prdm10Q3UTQ7 1184 aa30.56■■■□□ 2.48
Nhlrc1-201ENSMUST00000052747 B4galnt3Q6L8S8 986 aa30.56■■■□□ 2.48
Nhlrc1-201ENSMUST00000052747 Puf60Q3UEB3 564 aaKnown RBP30.55■■■□□ 2.48
Nhlrc1-201ENSMUST00000052747 Cnga1P29974 684 aa30.54■■■□□ 2.48
Nhlrc1-201ENSMUST00000052747 DiexfQ8BTT6 772 aaKnown RBP30.53■■■□□ 2.48
Nhlrc1-201ENSMUST00000052747 Golga2Q921M4 999 aa30.53■■■□□ 2.48
Nhlrc1-201ENSMUST00000052747 Trpm1Q2TV84 1622 aa30.53■■■□□ 2.48
Nhlrc1-201ENSMUST00000052747 Myom2Q14BI5 1463 aa30.53■■■□□ 2.48
Nhlrc1-201ENSMUST00000052747 Ehbp1l1Q99MS7 1716 aa30.53■■■□□ 2.48
Nhlrc1-201ENSMUST00000052747 Talpid3E9PV87 1520 aa30.53■■■□□ 2.48
Nhlrc1-201ENSMUST00000052747 DnmbpQ6TXD4 1580 aa30.52■■■□□ 2.48
Nhlrc1-201ENSMUST00000052747 Myom1Q62234 1667 aaKnown RBP30.52■■■□□ 2.48
Nhlrc1-201ENSMUST00000052747 Gprasp1Q5U4C1 1347 aa30.51■■■□□ 2.48
Nhlrc1-201ENSMUST00000052747 OvosQ3UU35 1456 aa30.5■■■□□ 2.47
Nhlrc1-201ENSMUST00000052747 Kiaa1107Q80TK0 1369 aa30.5■■■□□ 2.47
Nhlrc1-201ENSMUST00000052747 ChgaP26339 463 aaKnown RBP30.5■■■□□ 2.47
Nhlrc1-201ENSMUST00000052747 Efcab6Q6P1E8 1516 aa30.48■■■□□ 2.47
Nhlrc1-201ENSMUST00000052747 Uggt1Q6P5E4 1551 aa30.48■■■□□ 2.47
Nhlrc1-201ENSMUST00000052747 Depdc5P61460 1591 aa30.47■■■□□ 2.47
Nhlrc1-201ENSMUST00000052747 Gli2Q0VGT2 1544 aa30.45■■■□□ 2.47
Nhlrc1-201ENSMUST00000052747 Dbr1Q923B1 550 aa30.45■■■□□ 2.46
Nhlrc1-201ENSMUST00000052747 Sipa1l1Q8C0T5 1782 aa30.44■■■□□ 2.46
Nhlrc1-201ENSMUST00000052747 EspnQ9ET47 871 aa30.44■■■□□ 2.46
Nhlrc1-201ENSMUST00000052747 Uspl1Q3ULM6 1089 aa30.43■■■□□ 2.46
Nhlrc1-201ENSMUST00000052747 Stag3O70576 1240 aa30.41■■■□□ 2.46
Nhlrc1-201ENSMUST00000052747 Ralbp1Q62172 648 aa30.4■■■□□ 2.46
Nhlrc1-201ENSMUST00000052747 Chmp5Q9D7S9 219 aa30.39■■■□□ 2.46
Nhlrc1-201ENSMUST00000052747 Ptch1Q61115 1434 aa30.38■■■□□ 2.45
Nhlrc1-201ENSMUST00000052747 AU022751B1B0V2 589 aa30.38■■■□□ 2.45
Retrieved 100 of 22,080 RNA–protein pairs in 48.7 ms