RNA–Protein interactions for RNA: ENSMUST00000052747.3

Nhlrc1-201, Transcript of E3 ubiquitin-protein ligase NHLRC1, mousemouse

APPRIS P1 BASIC

Gene Nhlrc1, Length 2,294 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc1-201ENSMUST00000052747 NischQ80TM9 1593 aa44.93■■■■■ 4.78
Nhlrc1-201ENSMUST00000052747 Gm35339A0A140LHH9 1649 aa44.04■■■■■ 4.64
Nhlrc1-201ENSMUST00000052747 Abcc9P70170 1546 aa43.65■■■■■ 4.58
Nhlrc1-201ENSMUST00000052747 Abcc8B2RUS7 1588 aa42.61■■■■■ 4.41
Nhlrc1-201ENSMUST00000052747 Rhox8Q6VSS7 320 aa41.86■■■■■ 4.29
Nhlrc1-201ENSMUST00000052747 Rtl1Q7M732 1744 aa41.39■■■■■ 4.22
Nhlrc1-201ENSMUST00000052747 Ccdc180J3QNE4 1664 aa40.69■■■■■ 4.1
Nhlrc1-201ENSMUST00000052747 Zcchc6Q5BLK4 1491 aaKnown RBP39.92■■■■□ 3.98
Nhlrc1-201ENSMUST00000052747 Dcaf1Q80TR8 1506 aa39.75■■■■□ 3.95
Nhlrc1-201ENSMUST00000052747 ScribQ80U72 1612 aa39.62■■■■□ 3.93
Nhlrc1-201ENSMUST00000052747 Rb1cc1Q9ESK9 1588 aa39.4■■■■□ 3.9
Nhlrc1-201ENSMUST00000052747 Kdm5dQ62240 1548 aa38.95■■■■□ 3.83
Nhlrc1-201ENSMUST00000052747 Baz1aO88379 1555 aa38.93■■■■□ 3.82
Nhlrc1-201ENSMUST00000052747 Ccdc136Q3TVA9 1136 aa38.8■■■■□ 3.8
Nhlrc1-201ENSMUST00000052747 Rpgrip1Q9EPQ2 1331 aa38.74■■■■□ 3.79
Nhlrc1-201ENSMUST00000052747 HrcG5E8J6 738 aa38.73■■■■□ 3.79
Nhlrc1-201ENSMUST00000052747 NacadQ5SWP3 1504 aa38.58■■■■□ 3.77
Nhlrc1-201ENSMUST00000052747 Acin1Q9JIX8 1338 aaKnown RBP38.19■■■■□ 3.7
Nhlrc1-201ENSMUST00000052747 Crybg2B7ZCC2 1516 aa38.1■■■■□ 3.69
Nhlrc1-201ENSMUST00000052747 Smarca2Q6DIC0 1577 aa38.08■■■■□ 3.69
Nhlrc1-201ENSMUST00000052747 Ehmt2Q9Z148 1263 aaKnown RBP38.03■■■■□ 3.68
Nhlrc1-201ENSMUST00000052747 Trim41Q5NCC3 630 aa37.99■■■■□ 3.67
Nhlrc1-201ENSMUST00000052747 Sycp2Q9CUU3 1500 aa37.74■■■■□ 3.63
Nhlrc1-201ENSMUST00000052747 Cep164Q5DU05 1446 aa37.58■■■■□ 3.61
Nhlrc1-201ENSMUST00000052747 Brd4Q9ESU6 1400 aaKnown RBP37.18■■■■□ 3.54
Nhlrc1-201ENSMUST00000052747 Cecr2E9Q2Z1 1453 aa37.12■■■■□ 3.53
Nhlrc1-201ENSMUST00000052747 Cngb1E1AZ71 1325 aa37.11■■■■□ 3.53
Nhlrc1-201ENSMUST00000052747 Rsf1E9PWW9 1441 aaKnown RBP37.06■■■■□ 3.52
Nhlrc1-201ENSMUST00000052747 Chic1Q8CBW7 227 aa36.99■■■■□ 3.51
Nhlrc1-201ENSMUST00000052747 BicraF8VPZ9 1578 aa36.88■■■■□ 3.49
Nhlrc1-201ENSMUST00000052747 Synj1Q8CHC4 1574 aa36.88■■■■□ 3.49
Nhlrc1-201ENSMUST00000052747 Golga3P55937 1487 aa36.87■■■■□ 3.49
Nhlrc1-201ENSMUST00000052747 Ccdc88bQ4QRL3 1481 aa36.79■■■■□ 3.48
Nhlrc1-201ENSMUST00000052747 Gab3Q8BSM5 595 aa36.76■■■■□ 3.48
Nhlrc1-201ENSMUST00000052747 Pcgf6Q99NA9 353 aa36.65■■■■□ 3.46
Nhlrc1-201ENSMUST00000052747 CftrP26361 1476 aa36.6■■■■□ 3.45
Nhlrc1-201ENSMUST00000052747 Esf1Q3V1V3 845 aaKnown RBP36.45■■■■□ 3.43
Nhlrc1-201ENSMUST00000052747 Top2bQ64511 1612 aa36.41■■■■□ 3.42
Nhlrc1-201ENSMUST00000052747 Cttnbp2B9EJA2 1648 aa36.38■■■■□ 3.41
Nhlrc1-201ENSMUST00000052747 Smarca4Q3TKT4 1613 aaKnown RBP36.17■■■■□ 3.38
Nhlrc1-201ENSMUST00000052747 Cc2d2aQ8CFW7 1633 aa36.1■■■■□ 3.37
Nhlrc1-201ENSMUST00000052747 Supt5hO55201 1082 aaKnown RBP36.09■■■■□ 3.37
Nhlrc1-201ENSMUST00000052747 Mier1Q5UAK0 511 aa35.96■■■■□ 3.35
Nhlrc1-201ENSMUST00000052747 NefmP08553 848 aa35.89■■■■□ 3.34
Nhlrc1-201ENSMUST00000052747 Fmn1Q05860 1466 aa35.85■■■■□ 3.33
Nhlrc1-201ENSMUST00000052747 Rapgef2Q8CHG7 1496 aa35.82■■■■□ 3.33
Nhlrc1-201ENSMUST00000052747 Top2aQ01320 1528 aaKnown RBP35.75■■■■□ 3.31
Nhlrc1-201ENSMUST00000052747 Zeb1Q64318 1117 aa35.72■■■■□ 3.31
Nhlrc1-201ENSMUST00000052747 Iqgap2Q3UQ44 1575 aa35.67■■■■□ 3.3
Nhlrc1-201ENSMUST00000052747 Cep162Q6ZQ06 1403 aa35.53■■■■□ 3.28
Nhlrc1-201ENSMUST00000052747 UbtfP25976 765 aaKnown RBP35.45■■■■□ 3.27
Nhlrc1-201ENSMUST00000052747 Atad2bE9Q166 1460 aaKnown RBP35.39■■■■□ 3.26
Nhlrc1-201ENSMUST00000052747 Myt1lP97500 1187 aa35.39■■■■□ 3.26
Nhlrc1-201ENSMUST00000052747 Npm2Q80W85 207 aa35.27■■■■□ 3.24
Nhlrc1-201ENSMUST00000052747 Sall2Q9QX96 1004 aa35.21■■■■□ 3.23
Nhlrc1-201ENSMUST00000052747 TnnQ80Z71 1560 aa35.18■■■■□ 3.22
Nhlrc1-201ENSMUST00000052747 Eif4g1Q6NZJ6 1600 aaKnown RBP35.18■■■■□ 3.22
Nhlrc1-201ENSMUST00000052747 Pds5bQ4VA53 1446 aaKnown RBP35.16■■■■□ 3.22
Nhlrc1-201ENSMUST00000052747 Neurod1Q60867 357 aa35.12■■■■□ 3.21
Nhlrc1-201ENSMUST00000052747 Clip1Q922J3 1391 aa35.04■■■■□ 3.2
Nhlrc1-201ENSMUST00000052747 Las1lA2BE28 776 aaKnown RBP34.95■■■■□ 3.19
Nhlrc1-201ENSMUST00000052747 Frmpd1A2AKB4 1549 aa34.93■■■■□ 3.18
Nhlrc1-201ENSMUST00000052747 Wdr62Q3U3T8 1523 aa34.9■■■■□ 3.18
Nhlrc1-201ENSMUST00000052747 Plekhg3Q4VAC9 1341 aa34.89■■■■□ 3.18
Nhlrc1-201ENSMUST00000052747 Arhgap35Q91YM2 1499 aa34.88■■■■□ 3.17
Nhlrc1-201ENSMUST00000052747 PtprkP35822 1457 aa34.82■■■■□ 3.16
Nhlrc1-201ENSMUST00000052747 Lamc3Q9R0B6 1581 aa34.81■■■■□ 3.16
Nhlrc1-201ENSMUST00000052747 Aebp2Q9Z248 504 aaKnown RBP34.81■■■■□ 3.16
Nhlrc1-201ENSMUST00000052747 Wdr66E9Q743 1299 aa34.8■■■■□ 3.16
Nhlrc1-201ENSMUST00000052747 NrkQ9R0G8 1455 aa34.79■■■■□ 3.16
Nhlrc1-201ENSMUST00000052747 Ncapd3Q6ZQK0 1506 aa34.73■■■■□ 3.15
Nhlrc1-201ENSMUST00000052747 Kif15Q6P9L6 1387 aa34.68■■■■□ 3.14
Nhlrc1-201ENSMUST00000052747 Il27Q8K3I6 234 aa34.66■■■■□ 3.14
Nhlrc1-201ENSMUST00000052747 Eea1Q8BL66 1411 aa34.63■■■■□ 3.13
Nhlrc1-201ENSMUST00000052747 TonslQ6NZL6 1363 aa34.63■■■■□ 3.13
Nhlrc1-201ENSMUST00000052747 Arap1Q4LDD4 1452 aa34.62■■■■□ 3.13
Nhlrc1-201ENSMUST00000052747 Shroom4Q1W617 1475 aa34.61■■■■□ 3.13
Nhlrc1-201ENSMUST00000052747 ClspnQ80YR7 1315 aa34.6■■■■□ 3.13
Nhlrc1-201ENSMUST00000052747 Ercc6F8VPZ5 1481 aa34.59■■■■□ 3.13
Nhlrc1-201ENSMUST00000052747 Camsap1A2AHC3 1581 aa34.58■■■■□ 3.13
Nhlrc1-201ENSMUST00000052747 Unc13aQ4KUS2 1712 aa34.55■■■■□ 3.12
Nhlrc1-201ENSMUST00000052747 Map3k1P53349 1493 aa34.51■■■■□ 3.11
Nhlrc1-201ENSMUST00000052747 Arhgef5E9Q7D5 1581 aa34.48■■■■□ 3.11
Nhlrc1-201ENSMUST00000052747 Setd5Q5XJV7 1441 aa34.46■■■■□ 3.11
Nhlrc1-201ENSMUST00000052747 Ap3b1Q9Z1T1 1105 aa34.46■■■■□ 3.11
Nhlrc1-201ENSMUST00000052747 Ccdc18Q640L5 1455 aa34.39■■■■□ 3.1
Nhlrc1-201ENSMUST00000052747 Grin2bQ01097 1482 aa34.38■■■■□ 3.09
Nhlrc1-201ENSMUST00000052747 Anks4bQ8K3X6 423 aa34.36■■■■□ 3.09
Nhlrc1-201ENSMUST00000052747 Ppargc1bQ8VHJ7 1014 aa34.34■■■■□ 3.09
Nhlrc1-201ENSMUST00000052747 Mroh2bQ7M6Y6 1581 aa34.29■■■■□ 3.08
Nhlrc1-201ENSMUST00000052747 Tiam1Q60610 1591 aa34.27■■■■□ 3.08
Nhlrc1-201ENSMUST00000052747 Kdm5bQ80Y84 1544 aa34.25■■■■□ 3.07
Nhlrc1-201ENSMUST00000052747 Nop58Q6DFW4 536 aaKnown RBP34.23■■■■□ 3.07
Nhlrc1-201ENSMUST00000052747 Baz1bQ9Z277 1479 aa34.22■■■■□ 3.07
Nhlrc1-201ENSMUST00000052747 Cdk11bP24788 784 aaKnown RBP34.21■■■■□ 3.07
Nhlrc1-201ENSMUST00000052747 Erich3F6QRE9 1637 aa34.19■■■■□ 3.06
Nhlrc1-201ENSMUST00000052747 Ankrd26Q811D2 1581 aa34.18■■■■□ 3.06
Nhlrc1-201ENSMUST00000052747 Naip1Q9QWK5 1403 aa34.13■■■■□ 3.05
Nhlrc1-201ENSMUST00000052747 AqrQ8CFQ3 1481 aaKnown RBP34.12■■■■□ 3.05
Nhlrc1-201ENSMUST00000052747 BlmO88700 1416 aa34.07■■■■□ 3.04
Retrieved 100 of 22,080 RNA–protein pairs in 16.4 ms