RNA–Protein interactions for RNA: ENSMUST00000027988.7

Ccdc3-201, Transcript of Coiled-coil domain-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc3, Length 2,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3-201ENSMUST00000027988 Abcc6Q9R1S7 1498 aa24.37■■□□□ 1.49
Ccdc3-201ENSMUST00000027988 Kif16bB1AVY7 1312 aa24.37■■□□□ 1.49
Ccdc3-201ENSMUST00000027988 DiexfQ8BTT6 772 aaKnown RBP24.37■■□□□ 1.49
Ccdc3-201ENSMUST00000027988 Sbno1Q689Z5 1390 aa24.35■■□□□ 1.49
Ccdc3-201ENSMUST00000027988 Abca17E9PX95 1733 aa24.35■■□□□ 1.49
Ccdc3-201ENSMUST00000027988 Upf2A2AT37 1269 aaKnown RBP24.34■■□□□ 1.49
Ccdc3-201ENSMUST00000027988 Fam184bQ0KK56 942 aa24.33■■□□□ 1.48
Ccdc3-201ENSMUST00000027988 NeflP08551 543 aa24.32■■□□□ 1.48
Ccdc3-201ENSMUST00000027988 Pola1P33609 1465 aa24.32■■□□□ 1.48
Ccdc3-201ENSMUST00000027988 Nsd2Q8BVE8 1365 aa24.31■■□□□ 1.48
Ccdc3-201ENSMUST00000027988 TnikP83510 1323 aa24.29■■□□□ 1.48
Ccdc3-201ENSMUST00000027988 Rab3gap2Q8BMG7 1366 aa24.29■■□□□ 1.48
Ccdc3-201ENSMUST00000027988 Kif3bQ61771 747 aa24.28■■□□□ 1.48
Ccdc3-201ENSMUST00000027988 ChgaP26339 463 aaKnown RBP24.28■■□□□ 1.48
Ccdc3-201ENSMUST00000027988 Uggt2E9Q4X2 1504 aa24.28■■□□□ 1.48
Ccdc3-201ENSMUST00000027988 Ttll13A4Q9F6 804 aa24.27■■□□□ 1.48
Ccdc3-201ENSMUST00000027988 Os9Q8K2C7 672 aa24.26■■□□□ 1.47
Ccdc3-201ENSMUST00000027988 B4galnt3Q6L8S8 986 aa24.26■■□□□ 1.47
Ccdc3-201ENSMUST00000027988 Myo5cE9Q1F5 1742 aa24.26■■□□□ 1.47
Ccdc3-201ENSMUST00000027988 Apbb1Q9QXJ1 710 aa24.25■■□□□ 1.47
Ccdc3-201ENSMUST00000027988 Stk24Q99KH8 431 aa24.25■■□□□ 1.47
Ccdc3-201ENSMUST00000027988 Arid4bA2CG63 1314 aaKnown RBP24.23■■□□□ 1.47
Ccdc3-201ENSMUST00000027988 Prdm10Q3UTQ7 1184 aa24.23■■□□□ 1.47
Ccdc3-201ENSMUST00000027988 Kif7B7ZNG0 1348 aa24.23■■□□□ 1.47
Ccdc3-201ENSMUST00000027988 Gm20521D3Z5F7 333 aa24.22■■□□□ 1.47
Ccdc3-201ENSMUST00000027988 Clasp1Q80TV8 1535 aaKnown RBP24.22■■□□□ 1.47
Ccdc3-201ENSMUST00000027988 Ylpm1Q9R0I7 1386 aaKnown RBP24.22■■□□□ 1.47
Ccdc3-201ENSMUST00000027988 Fan1Q69ZT1 1020 aa24.2■■□□□ 1.47
Ccdc3-201ENSMUST00000027988 Col17a1Q07563 1470 aa24.2■■□□□ 1.46
Ccdc3-201ENSMUST00000027988 Itsn2Q9Z0R6 1659 aa24.2■■□□□ 1.46
Ccdc3-201ENSMUST00000027988 Ttc41Q692V3 1318 aa24.2■■□□□ 1.46
Ccdc3-201ENSMUST00000027988 Ccdc27Q3V036 639 aa24.19■■□□□ 1.46
Ccdc3-201ENSMUST00000027988 Usp19Q3UJD6 1360 aa24.19■■□□□ 1.46
Ccdc3-201ENSMUST00000027988 Neurod2Q62414 383 aa24.19■■□□□ 1.46
Ccdc3-201ENSMUST00000027988 Dbr1Q923B1 550 aa24.19■■□□□ 1.46
Ccdc3-201ENSMUST00000027988 Abca6Q8K441 1624 aa24.19■■□□□ 1.46
Ccdc3-201ENSMUST00000027988 Ttc21bQ0HA38 1315 aa24.18■■□□□ 1.46
Ccdc3-201ENSMUST00000027988 Fndc1E9Q043 1732 aa24.18■■□□□ 1.46
Ccdc3-201ENSMUST00000027988 Myo3aQ8K3H5 1613 aa24.18■■□□□ 1.46
Ccdc3-201ENSMUST00000027988 Kdm2bQ6P1G2 1309 aa24.18■■□□□ 1.46
Ccdc3-201ENSMUST00000027988 Usp40Q8BWR4 1235 aa24.18■■□□□ 1.46
Ccdc3-201ENSMUST00000027988 Speer4f1Q9D5Q6 258 aa24.18■■□□□ 1.46
Ccdc3-201ENSMUST00000027988 Dcaf11Q91VU6 549 aa24.17■■□□□ 1.46
Ccdc3-201ENSMUST00000027988 Atf7ipQ7TT18 1306 aa24.16■■□□□ 1.46
Ccdc3-201ENSMUST00000027988 AnkarA2RT91 1465 aa24.16■■□□□ 1.46
Ccdc3-201ENSMUST00000027988 Abca9Q8K449 1623 aa24.16■■□□□ 1.46
Ccdc3-201ENSMUST00000027988 Arid3cA6PWV5 409 aa24.15■■□□□ 1.46
Ccdc3-201ENSMUST00000027988 Gtf2e1Q9D0D5 440 aa24.15■■□□□ 1.46
Ccdc3-201ENSMUST00000027988 Nos1Q9Z0J4 1429 aa24.15■■□□□ 1.46
Ccdc3-201ENSMUST00000027988 Tmem131lQ3U3D7 1597 aa24.15■■□□□ 1.46
Ccdc3-201ENSMUST00000027988 Zfyve16Q80U44 1528 aa24.15■■□□□ 1.46
Ccdc3-201ENSMUST00000027988 Gas2l2Q5SSG4 860 aa24.14■■□□□ 1.46
Ccdc3-201ENSMUST00000027988 Cnga1P29974 684 aa24.13■■□□□ 1.45
Ccdc3-201ENSMUST00000027988 Rwdd1Q9CQK7 243 aa24.13■■□□□ 1.45
Ccdc3-201ENSMUST00000027988 Plekhh1Q80TI1 1356 aa24.13■■□□□ 1.45
Ccdc3-201ENSMUST00000027988 Iqgap3F8VQ29 1632 aa24.13■■□□□ 1.45
Ccdc3-201ENSMUST00000027988 ErbinQ80TH2 1402 aa24.13■■□□□ 1.45
Ccdc3-201ENSMUST00000027988 Kdm5aQ3UXZ9 1690 aa24.12■■□□□ 1.45
Ccdc3-201ENSMUST00000027988 Ccdc30Q8BVF4 654 aa24.11■■□□□ 1.45
Ccdc3-201ENSMUST00000027988 AatkQ80YE4 1365 aa24.11■■□□□ 1.45
Ccdc3-201ENSMUST00000027988 Srpk2O54781 681 aaKnown RBP24.1■■□□□ 1.45
Ccdc3-201ENSMUST00000027988 Iqcf3Q9D498 203 aa24.1■■□□□ 1.45
Ccdc3-201ENSMUST00000027988 Hdac5Q9Z2V6 1113 aa24.1■■□□□ 1.45
Ccdc3-201ENSMUST00000027988 Cdk5rap2Q8K389 1822 aa24.1■■□□□ 1.45
Ccdc3-201ENSMUST00000027988 Ythdc2B2RR83 1445 aaKnown RBP24.1■■□□□ 1.45
Ccdc3-201ENSMUST00000027988 Nlrp6Q91WS2 869 aa24.09■■□□□ 1.45
Ccdc3-201ENSMUST00000027988 Kiaa1107Q80TK0 1369 aa24.09■■□□□ 1.45
Ccdc3-201ENSMUST00000027988 Cep152A2AUM9 1736 aaKnown RBP24.09■■□□□ 1.45
Ccdc3-201ENSMUST00000027988 Myom1Q62234 1667 aaKnown RBP24.08■■□□□ 1.44
Ccdc3-201ENSMUST00000027988 Abca8aQ8K442 1620 aa24.07■■□□□ 1.44
Ccdc3-201ENSMUST00000027988 Igf1rQ60751 1373 aa24.06■■□□□ 1.44
Ccdc3-201ENSMUST00000027988 Rims1Q99NE5 1463 aa24.05■■□□□ 1.44
Ccdc3-201ENSMUST00000027988 PtprtQ99M80 1454 aa24.05■■□□□ 1.44
Ccdc3-201ENSMUST00000027988 Mbd3Q9Z2D8 285 aaKnown RBP24.05■■□□□ 1.44
Ccdc3-201ENSMUST00000027988 Tspyl2Q7TQI8 677 aa24.04■■□□□ 1.44
Ccdc3-201ENSMUST00000027988 Lemd3Q9WU40 921 aa24.04■■□□□ 1.44
Ccdc3-201ENSMUST00000027988 Nkx1-2P42580 305 aa24.04■■□□□ 1.44
Ccdc3-201ENSMUST00000027988 Znf518aB2RRF6 1478 aaKnown RBP24.04■■□□□ 1.44
Ccdc3-201ENSMUST00000027988 Prex1Q69ZK0 1650 aa24.04■■□□□ 1.44
Ccdc3-201ENSMUST00000027988 Nphp4P59240 1425 aa24.04■■□□□ 1.44
Ccdc3-201ENSMUST00000027988 P2rx7Q9Z1M0 595 aa24.01■■□□□ 1.43
Ccdc3-201ENSMUST00000027988 Golga2Q921M4 999 aa24■■□□□ 1.43
Ccdc3-201ENSMUST00000027988 Chmp5Q9D7S9 219 aa24■■□□□ 1.43
Ccdc3-201ENSMUST00000027988 Puf60Q3UEB3 564 aaKnown RBP23.99■■□□□ 1.43
Ccdc3-201ENSMUST00000027988 Adgrb3Q80ZF8 1522 aa23.98■■□□□ 1.43
Ccdc3-201ENSMUST00000027988 Uspl1Q3ULM6 1089 aa23.97■■□□□ 1.43
Ccdc3-201ENSMUST00000027988 EspnQ9ET47 871 aa23.97■■□□□ 1.43
Ccdc3-201ENSMUST00000027988 Atxn3Q9CVD2 355 aa23.97■■□□□ 1.43
Ccdc3-201ENSMUST00000027988 Talpid3E9PV87 1520 aa23.97■■□□□ 1.43
Ccdc3-201ENSMUST00000027988 PrkcshO08795 521 aa23.96■■□□□ 1.43
Ccdc3-201ENSMUST00000027988 Smc5Q8CG46 1101 aaKnown RBP23.96■■□□□ 1.43
Ccdc3-201ENSMUST00000027988 Ehbp1l1Q99MS7 1716 aa23.96■■□□□ 1.43
Ccdc3-201ENSMUST00000027988 Trpm1Q2TV84 1622 aa23.94■■□□□ 1.42
Ccdc3-201ENSMUST00000027988 AU022751B1B0V2 589 aa23.94■■□□□ 1.42
Ccdc3-201ENSMUST00000027988 CanxP35564 591 aaKnown RBP23.94■■□□□ 1.42
Ccdc3-201ENSMUST00000027988 Pank1Q8K4K6 548 aa23.94■■□□□ 1.42
Ccdc3-201ENSMUST00000027988 Sipa1l1Q8C0T5 1782 aa23.94■■□□□ 1.42
Ccdc3-201ENSMUST00000027988 DnmbpQ6TXD4 1580 aa23.93■■□□□ 1.42
Ccdc3-201ENSMUST00000027988 Efcab6Q6P1E8 1516 aa23.93■■□□□ 1.42
Ccdc3-201ENSMUST00000027988 Gprasp1Q5U4C1 1347 aa23.93■■□□□ 1.42
Retrieved 100 of 22,080 RNA–protein pairs in 12.9 ms