RNA–Protein interactions for RNA: YLR394W

CST9, Transcript of SUMO E3 ligase, yeastyeast

Gene CST9, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CST9YLR394W MNN5P46982 586 aa1.95□□□□□ -2.1
CST9YLR394W HOC1P47124 396 aa1.95□□□□□ -2.1
CST9YLR394W DAN1P47178 298 aa1.95□□□□□ -2.1
CST9YLR394W USE1P53146 245 aa1.95□□□□□ -2.1
CST9YLR394W NOP13P53883 403 aaKnown RBP RIP-Chip data1.95□□□□□ -2.1not detected
CST9YLR394W YNL046WP53956 172 aa1.95□□□□□ -2.1
CST9YLR394W RRN5Q02983 363 aa1.95□□□□□ -2.1
CST9YLR394W YKL075CP36083 450 aa1.94□□□□□ -2.1
CST9YLR394W YDR124WQ04608 324 aa1.94□□□□□ -2.1
CST9YLR394W SYC1Q08553 188 aaPredicted RBP1.94□□□□□ -2.1
CST9YLR394W SAS5Q99314 248 aa1.94□□□□□ -2.1
CST9YLR394W YHR139C-AO13536 103 aa1.93□□□□□ -2.1
CST9YLR394W YCR102CP25608 368 aa1.93□□□□□ -2.1
CST9YLR394W RPS5P26783 225 aaKnown RBP1.93□□□□□ -2.1
CST9YLR394W CTR2P38865 189 aa1.93□□□□□ -2.1
CST9YLR394W BFR1P38934 470 aaKnown RBP RIP-Chip data1.93□□□□□ -2.1not detected
CST9YLR394W CIS3P47001 227 aa1.93□□□□□ -2.1
CST9YLR394W YJR079WP47126 109 aa1.93□□□□□ -2.1
CST9YLR394W SRL4Q03085 281 aa1.93□□□□□ -2.1
CST9YLR394W DCR2Q05924 578 aa1.93□□□□□ -2.1
CST9YLR394W PAM18Q07914 168 aa1.93□□□□□ -2.1
CST9YLR394W YLR030WQ07967 263 aa1.93□□□□□ -2.1
CST9YLR394W RRP40Q08285 240 aaKnown RBP1.93□□□□□ -2.1
CST9YLR394W MSA1Q08471 629 aa1.93□□□□□ -2.1
CST9YLR394W ABP140Q08641 628 aaKnown RBP1.93□□□□□ -2.1
CST9YLR394W YLR462WO13556 202 aa1.92□□□□□ -2.1
CST9YLR394W SGE1P33335 543 aa1.92□□□□□ -2.1
CST9YLR394W YGP1P38616 354 aaKnown RBP1.92□□□□□ -2.1
CST9YLR394W YHB1P39676 399 aaKnown RBP1.92□□□□□ -2.1
CST9YLR394W YEL075CP39972 122 aa1.92□□□□□ -2.1
CST9YLR394W EMC4P53073 190 aa1.92□□□□□ -2.1
CST9YLR394W TIM8P57744 87 aa1.92□□□□□ -2.1
CST9YLR394W MZM1Q03429 123 aaPredicted RBP1.92□□□□□ -2.1
CST9YLR394W GOT1Q03554 138 aa1.92□□□□□ -2.1
CST9YLR394W SPG3Q04398 127 aaPredicted RBP1.92□□□□□ -2.1
CST9YLR394W YML096WQ04489 525 aa1.92□□□□□ -2.1
CST9YLR394W RRS1Q08746 203 aaKnown RBP1.92□□□□□ -2.1
CST9YLR394W BBP1Q12365 385 aa1.92□□□□□ -2.1
CST9YLR394W RPL43AP0CX25 92 aaKnown RBP1.91□□□□□ -2.1
CST9YLR394W RPL43BP0CX26 92 aa1.91□□□□□ -2.1
CST9YLR394W RPO26P20435 155 aa1.91□□□□□ -2.1
CST9YLR394W SCM4P32564 187 aa1.91□□□□□ -2.1
CST9YLR394W KDX1P36005 433 aa1.91□□□□□ -2.1
CST9YLR394W URA8P38627 578 aaPredicted RBP1.91□□□□□ -2.1
CST9YLR394W GRE3P38715 327 aaKnown RBP RIP-Chip data1.91□□□□□ -2.1not detected
CST9YLR394W NUP84P52891 726 aa1.91□□□□□ -2.1
CST9YLR394W YGL159WP53110 370 aa1.91□□□□□ -2.1
CST9YLR394W RTC4P53850 401 aa1.91□□□□□ -2.1
CST9YLR394W SEI1Q06058 285 aa1.91□□□□□ -2.1
CST9YLR394W GIS3Q12418 502 aa1.91□□□□□ -2.1
CST9YLR394W COX5AP00424 153 aa1.91□□□□□ -2.1
CST9YLR394W YHR032W-AP0C5N6 59 aa1.91□□□□□ -2.1
CST9YLR394W ERD2P18414 219 aa1.91□□□□□ -2.1
CST9YLR394W YOR062CP36025 268 aa1.91□□□□□ -2.1
CST9YLR394W LDB7P38210 180 aa1.91□□□□□ -2.1
CST9YLR394W SSH1P38353 490 aaKnown RBP1.91□□□□□ -2.1
CST9YLR394W YHR127WP38833 243 aaKnown RBP1.91□□□□□ -2.1
CST9YLR394W RSM25P40496 264 aa1.91□□□□□ -2.1
CST9YLR394W SNX4P47057 423 aa1.91□□□□□ -2.1
CST9YLR394W YJL027CP47063 138 aaPredicted RBP1.91□□□□□ -2.1
CST9YLR394W RHO3Q00245 231 aaKnown RBP1.91□□□□□ -2.1
CST9YLR394W YPR172WQ06608 200 aa1.91□□□□□ -2.1
CST9YLR394W Q0255P03881 472 aa1.9□□□□□ -2.11
CST9YLR394W CCA1P21269 546 aa1.9□□□□□ -2.11
CST9YLR394W ERG24P32462 438 aaKnown RBP1.9□□□□□ -2.11
CST9YLR394W FZO1P38297 855 aa1.9□□□□□ -2.11
CST9YLR394W COS8P38723 381 aa1.9□□□□□ -2.11
CST9YLR394W YHR125WP38831 101 aa1.9□□□□□ -2.11
CST9YLR394W PIR1Q03178 341 aa1.9□□□□□ -2.11
CST9YLR394W YOR283WQ12040 230 aaKnown RBP1.9□□□□□ -2.11
CST9YLR394W YLR046CQ12253 270 aa1.9□□□□□ -2.11
CST9YLR394W EMC6Q12431 108 aa1.9□□□□□ -2.11
CST9YLR394W MATALPHA1P0CY06 175 aa1.89□□□□□ -2.11
CST9YLR394W HMLALPHA1P0CY07 175 aa1.89□□□□□ -2.11
CST9YLR394W MRPL39P36533 70 aa1.89□□□□□ -2.11
CST9YLR394W NRG2P38082 220 aa1.89□□□□□ -2.11
CST9YLR394W FMC1P40491 155 aa1.89□□□□□ -2.11
CST9YLR394W ARO80Q04052 950 aa1.89□□□□□ -2.11
CST9YLR394W FAR8Q05040 523 aa1.89□□□□□ -2.11
CST9YLR394W ATG10Q07879 167 aa1.89□□□□□ -2.11
CST9YLR394W YLR126CQ12288 251 aa1.89□□□□□ -2.11
CST9YLR394W MED4Q12343 284 aa1.89□□□□□ -2.11
CST9YLR394W UBR1P19812 1950 aa1.88□□□□□ -2.11
CST9YLR394W IPP1P00817 287 aaKnown RBP1.88□□□□□ -2.11
CST9YLR394W ARC15P40518 154 aaRIP-Chip data1.88□□□□□ -2.11not detected
CST9YLR394W RPA43P46669 326 aa1.88□□□□□ -2.11
CST9YLR394W PET117Q02771 107 aa1.88□□□□□ -2.11
CST9YLR394W KRE28Q04431 385 aa1.88□□□□□ -2.11
CST9YLR394W SNU23Q12368 194 aaPredicted RBP1.88□□□□□ -2.11
CST9YLR394W DOA4P32571 926 aa1.87□□□□□ -2.11
CST9YLR394W PRX1P34227 261 aaKnown RBP1.87□□□□□ -2.11
CST9YLR394W YJR149WP47177 404 aa1.87□□□□□ -2.11
CST9YLR394W TOS8P53147 276 aa1.87□□□□□ -2.11
CST9YLR394W GTR2P53290 341 aa1.87□□□□□ -2.11
CST9YLR394W PEX11Q12462 236 aa1.87□□□□□ -2.11
CST9YLR394W YHR086W-AQ3E746 53 aa1.87□□□□□ -2.11
CST9YLR394W SEC16P48415 2195 aaKnown RBP1.87□□□□□ -2.11
CST9YLR394W JIP3O13555 125 aa1.86□□□□□ -2.11
CST9YLR394W RAS2P01120 322 aaKnown RBP1.86□□□□□ -2.11
CST9YLR394W NTF2P33331 125 aaKnown RBP1.86□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 93.1 ms