Protein–RNA interactions for Protein: Q04398

SPG3, Stationary phase protein 3, yeastyeast

Predicted RBP Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SPG3Q04398 YML009W-BYML009W-B 477 nt21.31■■□□□ 1
SPG3Q04398 NSR1YGR159C 1245 nt21.1■□□□□ 0.97
SPG3Q04398 NOP1YDL014W 984 nt20.77■□□□□ 0.92
SPG3Q04398 YKL036CYKL036C 393 nt19.28■□□□□ 0.68
SPG3Q04398 MDJ1YFL016C 1536 nt18.61■□□□□ 0.57
SPG3Q04398 Q0297Q0297 156 nt18.25■□□□□ 0.51
SPG3Q04398 SRX1YKL086W 384 nt18.17■□□□□ 0.5
SPG3Q04398 YJL027CYJL027C 417 nt18.02■□□□□ 0.48
SPG3Q04398 SCS3YGL126W 1143 nt17.62■□□□□ 0.41
SPG3Q04398 YCR051WYCR051W 669 nt17.21■□□□□ 0.35
SPG3Q04398 YOL085CYOL085C 342 nt16.71■□□□□ 0.27
SPG3Q04398 DBP2YNL112W 1641 nt16.55■□□□□ 0.24
SPG3Q04398 PKP1YIL042C 1185 nt16.42■□□□□ 0.22
SPG3Q04398 RPP1BYDL130W 321 nt16.36■□□□□ 0.21
SPG3Q04398 TRN1tP(UGG)A 72 nt16.36■□□□□ 0.21
SPG3Q04398 SUF9tP(UGG)F 72 nt16.36■□□□□ 0.21
SPG3Q04398 SUF8tP(UGG)H 72 nt16.36■□□□□ 0.21
SPG3Q04398 tP(UGG)LtP(UGG)L 72 nt16.36■□□□□ 0.21
SPG3Q04398 SUF7tP(UGG)M 72 nt16.36■□□□□ 0.21
SPG3Q04398 tP(UGG)N1tP(UGG)N1 72 nt16.36■□□□□ 0.21
SPG3Q04398 tP(UGG)N2tP(UGG)N2 72 nt16.36■□□□□ 0.21
SPG3Q04398 tP(UGG)O1tP(UGG)O1 72 nt16.36■□□□□ 0.21
SPG3Q04398 SUF11tP(UGG)O2 72 nt16.36■□□□□ 0.21
SPG3Q04398 CCC1YLR220W 969 nt16.16■□□□□ 0.18
SPG3Q04398 YBR190WYBR190W 312 nt15.85■□□□□ 0.13
SPG3Q04398 ATS1YAL020C 1002 nt15.8■□□□□ 0.12
SPG3Q04398 SCJ1YMR214W 1134 nt15.76■□□□□ 0.11
SPG3Q04398 PET122YER153C 765 nt15.62■□□□□ 0.09
SPG3Q04398 RVS167YDR388W 1449 nt15.55■□□□□ 0.08
SPG3Q04398 tP(UGG)O3tP(UGG)O3 72 nt15.51■□□□□ 0.07
SPG3Q04398 RTC3YHR087W 336 nt15.47■□□□□ 0.07
SPG3Q04398 SCR1SCR1 522 nt15.46■□□□□ 0.07
SPG3Q04398 RRN5YLR141W 1092 nt15.18■□□□□ 0.02
SPG3Q04398 SHR5YOL110W 714 nt15.05■□□□□ -0
SPG3Q04398 YDJ1YNL064C 1230 nt15.01□□□□□ -0.01
SPG3Q04398 YER088W-BYER088W-B 147 nt14.89□□□□□ -0.03
SPG3Q04398 RSB1YOR049C 1065 nt14.89□□□□□ -0.03
SPG3Q04398 GAR1YHR089C 618 nt14.64□□□□□ -0.07
SPG3Q04398 PST2YDR032C 597 nt14.62□□□□□ -0.07
SPG3Q04398 DEP1YAL013W 1218 nt14.56□□□□□ -0.08
SPG3Q04398 URN1YPR152C 1398 nt14.55□□□□□ -0.08
SPG3Q04398 YNL208WYNL208W 600 nt14.37□□□□□ -0.11
SPG3Q04398 RPN10YHR200W 807 nt14.35□□□□□ -0.11
SPG3Q04398 OPI9YLR338W 858 nt14.32□□□□□ -0.12
SPG3Q04398 PUT4YOR348C 1884 nt14.31□□□□□ -0.12
SPG3Q04398 SAH1YER043C 1350 nt14.2□□□□□ -0.14
SPG3Q04398 TIR1YER011W 765 nt14.15□□□□□ -0.14
SPG3Q04398 ARE1YCR048W 1833 nt14.1□□□□□ -0.15
SPG3Q04398 YKL097CYKL097C 411 nt14.08□□□□□ -0.16
SPG3Q04398 SHU1YHL006C 453 nt13.99□□□□□ -0.17
SPG3Q04398 SSA1YAL005C 1929 nt13.97□□□□□ -0.17
SPG3Q04398 PUN1YLR414C 792 nt13.9□□□□□ -0.18
SPG3Q04398 YHR049C-AYHR049C-A 297 nt13.89□□□□□ -0.19
SPG3Q04398 YJR018WYJR018W 363 nt13.88□□□□□ -0.19
SPG3Q04398 POA1YBR022W 534 nt13.86□□□□□ -0.19
SPG3Q04398 SRB2YHR041C 633 nt13.78□□□□□ -0.2
SPG3Q04398 YJR120WYJR120W 351 nt13.74□□□□□ -0.21
SPG3Q04398 YAL037C-BYAL037C-B 975 nt13.72□□□□□ -0.21
SPG3Q04398 PTC2YER089C 1395 nt13.71□□□□□ -0.22
SPG3Q04398 RPP2BYDR382W 333 nt13.62□□□□□ -0.23
SPG3Q04398 BUD23YCR047C 828 nt13.56□□□□□ -0.24
SPG3Q04398 WWM1YFL010C 636 nt13.55□□□□□ -0.24
SPG3Q04398 BSC6YOL137W 1494 nt13.54□□□□□ -0.24
SPG3Q04398 YOR139CYOR139C 393 nt13.52□□□□□ -0.25
SPG3Q04398 NAB2YGL122C 1578 nt13.51□□□□□ -0.25
SPG3Q04398 YGR021WYGR021W 873 nt13.51□□□□□ -0.25
SPG3Q04398 HOM6YJR139C 1080 nt13.49□□□□□ -0.25
SPG3Q04398 SSA3YBL075C 1950 nt13.42□□□□□ -0.26
SPG3Q04398 MNP1YGL068W 585 nt13.42□□□□□ -0.26
SPG3Q04398 BDH2YAL061W 1254 nt13.39□□□□□ -0.27
SPG3Q04398 INM2YDR287W 879 nt13.38□□□□□ -0.27
SPG3Q04398 DAL1YIR027C 1383 nt13.36□□□□□ -0.27
SPG3Q04398 FIS1YIL065C 468 nt13.36□□□□□ -0.27
SPG3Q04398 NPL3YDR432W 1245 nt13.34□□□□□ -0.27
SPG3Q04398 YFL021C-AYFL021C-A 855 nt13.33□□□□□ -0.28
SPG3Q04398 FPR4YLR449W 1179 nt13.3□□□□□ -0.28
SPG3Q04398 RKM5YLR137W 1104 nt13.27□□□□□ -0.29
SPG3Q04398 YBL100CYBL100C 315 nt13.27□□□□□ -0.29
SPG3Q04398 LSM3YLR438C-A 270 nt13.25□□□□□ -0.29
SPG3Q04398 YOL037CYOL037C 354 nt13.25□□□□□ -0.29
SPG3Q04398 PHO4YFR034C 939 nt13.24□□□□□ -0.29
SPG3Q04398 FUN26YAL022C 1554 nt13.12□□□□□ -0.31
SPG3Q04398 TRM9YML014W 840 nt13.1□□□□□ -0.31
SPG3Q04398 CCT6YDR188W 1641 nt12.99□□□□□ -0.33
SPG3Q04398 tM(CAU)CtM(CAU)C 72 nt12.98□□□□□ -0.33
SPG3Q04398 IMT4tM(CAU)E 72 nt12.98□□□□□ -0.33
SPG3Q04398 IMT3tM(CAU)J3 72 nt12.98□□□□□ -0.33
SPG3Q04398 IMT1tM(CAU)O1 72 nt12.98□□□□□ -0.33
SPG3Q04398 IMT2tM(CAU)P 72 nt12.98□□□□□ -0.33
SPG3Q04398 YLR281CYLR281C 468 nt12.95□□□□□ -0.34
SPG3Q04398 YPS1YLR120C 1710 nt12.94□□□□□ -0.34
SPG3Q04398 YDR095CYDR095C 411 nt12.89□□□□□ -0.35
SPG3Q04398 ALF1YNL148C 765 nt12.88□□□□□ -0.35
SPG3Q04398 WHI5YOR083W 888 nt12.88□□□□□ -0.35
SPG3Q04398 SPT5YML010W 3192 nt12.86□□□□□ -0.35
SPG3Q04398 SUF2tP(AGG)C 72 nt12.85□□□□□ -0.35
SPG3Q04398 SUF10tP(AGG)N 72 nt12.85□□□□□ -0.35
SPG3Q04398 PUS2YGL063W 1113 nt12.83□□□□□ -0.36
SPG3Q04398 YHR165W-AYHR165W-A 312 nt12.77□□□□□ -0.37
SPG3Q04398 YLR154C-GYLR154C-G 150 nt12.76□□□□□ -0.37
Retrieved 100 of 7,029 protein–RNA pairs in 12.1 ms