RNA–Protein interactions for RNA: YMR159C

ATG16, Transcript of Conserved protein involved in autophagy, yeastyeast

Gene ATG16, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG16YMR159C CUE1P38428 203 aa2.14□□□□□ -2.07
ATG16YMR159C SVP26P38869 228 aa2.14□□□□□ -2.07
ATG16YMR159C YIL001WP40560 513 aa2.14□□□□□ -2.07
ATG16YMR159C YML108WQ03759 105 aa2.14□□□□□ -2.07
ATG16YMR159C DCN1Q12395 269 aa2.14□□□□□ -2.07
ATG16YMR159C YHR139C-AO13536 103 aa2.13□□□□□ -2.07
ATG16YMR159C PET117Q02771 107 aa2.13□□□□□ -2.07
ATG16YMR159C BCY1P07278 416 aaKnown RBP2.12□□□□□ -2.07
ATG16YMR159C SRB4P32569 687 aa2.12□□□□□ -2.07
ATG16YMR159C VTC1P40046 129 aaRIP-Chip data2.12□□□□□ -2.07not detected
ATG16YMR159C PEX17P40155 199 aa2.12□□□□□ -2.07
ATG16YMR159C YNR062CP53748 327 aa2.12□□□□□ -2.07
ATG16YMR159C CDC8P00572 216 aa2.11□□□□□ -2.07
ATG16YMR159C SPT3P06844 337 aa2.11□□□□□ -2.07
ATG16YMR159C PRM10P42946 383 aa2.11□□□□□ -2.07
ATG16YMR159C RPC17P47076 161 aa2.11□□□□□ -2.07
ATG16YMR159C TOS8P53147 276 aa2.11□□□□□ -2.07
ATG16YMR159C YNL010WP53981 241 aaKnown RBP2.11□□□□□ -2.07
ATG16YMR159C YCR016WP25617 290 aaKnown RBP2.1□□□□□ -2.07
ATG16YMR159C MEI4P29467 408 aa2.1□□□□□ -2.07
ATG16YMR159C NTF2P33331 125 aaKnown RBP2.1□□□□□ -2.07
ATG16YMR159C AVT2P39981 480 aa2.1□□□□□ -2.07
ATG16YMR159C TRM9P49957 279 aa2.1□□□□□ -2.07
ATG16YMR159C ERV29P53337 310 aa2.1□□□□□ -2.07
ATG16YMR159C BUD25P85052 153 aa2.1□□□□□ -2.07
ATG16YMR159C PSF1Q12488 208 aa2.1□□□□□ -2.07
ATG16YMR159C LSO2Q3E772 92 aaKnown RBP2.1□□□□□ -2.07
ATG16YMR159C PET9P18239 318 aaKnown RBP2.09□□□□□ -2.07
ATG16YMR159C VPS21P36017 210 aaKnown RBP2.09□□□□□ -2.07
ATG16YMR159C CDC10P25342 322 aaKnown RBP2.08□□□□□ -2.08
ATG16YMR159C PRE6P40303 254 aaKnown RBP2.08□□□□□ -2.08
ATG16YMR159C ICE2P40499 491 aa2.08□□□□□ -2.08
ATG16YMR159C YMD8Q03697 442 aa2.08□□□□□ -2.08
ATG16YMR159C IRC22P40006 225 aa2.07□□□□□ -2.08
ATG16YMR159C AGE2P40529 298 aa2.07□□□□□ -2.08
ATG16YMR159C RPL33BP41056 107 aaKnown RBP2.07□□□□□ -2.08
ATG16YMR159C NSA1P53136 463 aaPredicted RBP2.07□□□□□ -2.08
ATG16YMR159C YOL162WP0CF19 215 aa2.06□□□□□ -2.08
ATG16YMR159C REP2P03872 296 aa2.05□□□□□ -2.08
ATG16YMR159C MSN4P33749 630 aa2.05□□□□□ -2.08
ATG16YMR159C DOG2P38773 246 aa2.05□□□□□ -2.08
ATG16YMR159C PGD1P40356 397 aa2.05□□□□□ -2.08
ATG16YMR159C TIR3P40552 269 aa2.05□□□□□ -2.08
ATG16YMR159C LIA1P47120 325 aaKnown RBP2.05□□□□□ -2.08
ATG16YMR159C MIC26P50087 233 aa2.05□□□□□ -2.08
ATG16YMR159C NOP13P53883 403 aaKnown RBP RIP-Chip data2.05□□□□□ -2.08not detected
ATG16YMR159C TRM12Q04235 462 aa2.05□□□□□ -2.08
ATG16YMR159C SML1Q04964 104 aa2.05□□□□□ -2.08
ATG16YMR159C MATALPHA1P0CY06 175 aa2.04□□□□□ -2.08
ATG16YMR159C HMLALPHA1P0CY07 175 aa2.04□□□□□ -2.08
ATG16YMR159C YGL010WP25338 174 aa2.04□□□□□ -2.08
ATG16YMR159C SSO1P32867 290 aa2.04□□□□□ -2.08
ATG16YMR159C YER085CP40058 173 aa2.04□□□□□ -2.08
ATG16YMR159C COX15P40086 486 aa2.04□□□□□ -2.08
ATG16YMR159C LPP1Q04396 274 aa2.04□□□□□ -2.08
ATG16YMR159C YPR170W-BP0C5R9 85 aa2.03□□□□□ -2.08
ATG16YMR159C URA6P15700 204 aa2.03□□□□□ -2.08
ATG16YMR159C SRY1P36007 326 aa2.03□□□□□ -2.08
ATG16YMR159C YBR219CP38317 127 aa2.03□□□□□ -2.08
ATG16YMR159C AIF1P52923 378 aa2.03□□□□□ -2.08
ATG16YMR159C FYV6P53913 173 aa2.03□□□□□ -2.08
ATG16YMR159C MZM1Q03429 123 aaPredicted RBP2.03□□□□□ -2.08
ATG16YMR159C CFT1Q06632 1357 aaKnown RBP2.02□□□□□ -2.09
ATG16YMR159C YKR045CP36138 183 aa2.02□□□□□ -2.09
ATG16YMR159C YBR220CP38318 560 aa2.02□□□□□ -2.09
ATG16YMR159C URA8P38627 578 aaPredicted RBP2.02□□□□□ -2.09
ATG16YMR159C PRM8P53174 237 aa2.02□□□□□ -2.09
ATG16YMR159C SPG3Q04398 127 aaPredicted RBP2.02□□□□□ -2.09
ATG16YMR159C RPL27BP0C2H7 136 aaKnown RBP2.01□□□□□ -2.09
ATG16YMR159C RPL24BP24000 155 aaKnown RBP2.01□□□□□ -2.09
ATG16YMR159C ATG22P25568 528 aa2.01□□□□□ -2.09
ATG16YMR159C VMA6P32366 345 aaKnown RBP2.01□□□□□ -2.09
ATG16YMR159C POP4P38336 279 aa2.01□□□□□ -2.09
ATG16YMR159C BOL2P53082 120 aa2.01□□□□□ -2.09
ATG16YMR159C CDC123Q05791 360 aa2.01□□□□□ -2.09
ATG16YMR159C YNL217WP40152 326 aa2□□□□□ -2.09
ATG16YMR159C BRR6P53062 197 aa2□□□□□ -2.09
ATG16YMR159C DOC1P53068 250 aa2□□□□□ -2.09
ATG16YMR159C YLR162WQ06235 118 aa2□□□□□ -2.09
ATG16YMR159C CSI2Q08054 341 aa2□□□□□ -2.09
ATG16YMR159C RHO1P06780 209 aaKnown RBP1.99□□□□□ -2.09
ATG16YMR159C MRPS28P21771 286 aa1.99□□□□□ -2.09
ATG16YMR159C FZF1P32805 299 aa1.99□□□□□ -2.09
ATG16YMR159C RPL13BP40212 199 aaKnown RBP1.99□□□□□ -2.09
ATG16YMR159C FAR7P43592 221 aa1.99□□□□□ -2.09
ATG16YMR159C RPL13AQ12690 199 aaPredicted RBP1.99□□□□□ -2.09
ATG16YMR159C THP2O13539 261 aaKnown RBP1.98□□□□□ -2.09
ATG16YMR159C CDC28P00546 298 aaKnown RBP1.98□□□□□ -2.09
ATG16YMR159C YLR156WP0CE96 114 aa1.98□□□□□ -2.09
ATG16YMR159C YLR159WP0CE97 114 aa1.98□□□□□ -2.09
ATG16YMR159C YLR161WP0CE98 114 aa1.98□□□□□ -2.09
ATG16YMR159C MRPL28P36527 147 aa1.98□□□□□ -2.09
ATG16YMR159C GLE2P40066 365 aa1.98□□□□□ -2.09
ATG16YMR159C YRB2P40517 327 aa1.98□□□□□ -2.09
ATG16YMR159C SWP1Q02795 286 aa1.98□□□□□ -2.09
ATG16YMR159C SNZ1Q03148 297 aa1.98□□□□□ -2.09
ATG16YMR159C YMR31P19955 123 aa1.97□□□□□ -2.09
ATG16YMR159C UPS2P35200 230 aa1.97□□□□□ -2.09
ATG16YMR159C UMP1P38293 148 aa1.97□□□□□ -2.09
ATG16YMR159C YDR248CQ03786 193 aa1.97□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 129 ms