Protein–RNA interactions for Protein: P38318

YBR220C, Uncharacterized membrane protein YBR220C, yeastyeast

Predictions only

Length 560 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YBR220CP38318 YML009W-BYML009W-B 477 nt17.67■□□□□ 0.42
YBR220CP38318 NSR1YGR159C 1245 nt17.49■□□□□ 0.39
YBR220CP38318 NOP1YDL014W 984 nt17.31■□□□□ 0.36
YBR220CP38318 YKL036CYKL036C 393 nt16.07■□□□□ 0.16
YBR220CP38318 MDJ1YFL016C 1536 nt15.32■□□□□ 0.04
YBR220CP38318 Q0297Q0297 156 nt15.17■□□□□ 0.02
YBR220CP38318 SRX1YKL086W 384 nt15.1■□□□□ 0.01
YBR220CP38318 YJL027CYJL027C 417 nt15.02■□□□□ -0
YBR220CP38318 SCS3YGL126W 1143 nt14.66□□□□□ -0.06
YBR220CP38318 YCR051WYCR051W 669 nt14.3□□□□□ -0.12
YBR220CP38318 YOL085CYOL085C 342 nt13.9□□□□□ -0.18
YBR220CP38318 PKP1YIL042C 1185 nt13.62□□□□□ -0.23
YBR220CP38318 RPP1BYDL130W 321 nt13.61□□□□□ -0.23
YBR220CP38318 DBP2YNL112W 1641 nt13.61□□□□□ -0.23
YBR220CP38318 TRN1tP(UGG)A 72 nt13.55□□□□□ -0.24
YBR220CP38318 SUF9tP(UGG)F 72 nt13.55□□□□□ -0.24
YBR220CP38318 SUF8tP(UGG)H 72 nt13.55□□□□□ -0.24
YBR220CP38318 tP(UGG)LtP(UGG)L 72 nt13.55□□□□□ -0.24
YBR220CP38318 SUF7tP(UGG)M 72 nt13.55□□□□□ -0.24
YBR220CP38318 tP(UGG)N1tP(UGG)N1 72 nt13.55□□□□□ -0.24
YBR220CP38318 tP(UGG)N2tP(UGG)N2 72 nt13.55□□□□□ -0.24
YBR220CP38318 tP(UGG)O1tP(UGG)O1 72 nt13.55□□□□□ -0.24
YBR220CP38318 SUF11tP(UGG)O2 72 nt13.55□□□□□ -0.24
YBR220CP38318 CCC1YLR220W 969 nt13.37□□□□□ -0.27
YBR220CP38318 SCJ1YMR214W 1134 nt13.25□□□□□ -0.29
YBR220CP38318 ATS1YAL020C 1002 nt13.17□□□□□ -0.3
YBR220CP38318 YBR190WYBR190W 312 nt13.09□□□□□ -0.31
YBR220CP38318 PET122YER153C 765 nt12.95□□□□□ -0.34
YBR220CP38318 RVS167YDR388W 1449 nt12.91□□□□□ -0.34
YBR220CP38318 SCR1SCR1 522 nt12.91□□□□□ -0.34
YBR220CP38318 tP(UGG)O3tP(UGG)O3 72 nt12.86□□□□□ -0.35
YBR220CP38318 SSA3YBL075C 1950 nt12.83□□□□□ -0.35
YBR220CP38318 RTC3YHR087W 336 nt12.78□□□□□ -0.36
YBR220CP38318 RRN5YLR141W 1092 nt12.59□□□□□ -0.39
YBR220CP38318 YDJ1YNL064C 1230 nt12.48□□□□□ -0.41
YBR220CP38318 SHR5YOL110W 714 nt12.48□□□□□ -0.41
YBR220CP38318 RSB1YOR049C 1065 nt12.39□□□□□ -0.43
YBR220CP38318 YER088W-BYER088W-B 147 nt12.35□□□□□ -0.43
YBR220CP38318 PST2YDR032C 597 nt12.17□□□□□ -0.46
YBR220CP38318 GAR1YHR089C 618 nt12.12□□□□□ -0.47
YBR220CP38318 DEP1YAL013W 1218 nt12.01□□□□□ -0.49
YBR220CP38318 URN1YPR152C 1398 nt12.01□□□□□ -0.49
YBR220CP38318 RPN10YHR200W 807 nt11.93□□□□□ -0.5
YBR220CP38318 YNL208WYNL208W 600 nt11.91□□□□□ -0.5
YBR220CP38318 OPI9YLR338W 858 nt11.83□□□□□ -0.52
YBR220CP38318 YKL097CYKL097C 411 nt11.77□□□□□ -0.53
YBR220CP38318 TIR1YER011W 765 nt11.73□□□□□ -0.53
YBR220CP38318 PUT4YOR348C 1884 nt11.72□□□□□ -0.53
YBR220CP38318 SAH1YER043C 1350 nt11.67□□□□□ -0.54
YBR220CP38318 SHU1YHL006C 453 nt11.61□□□□□ -0.55
YBR220CP38318 ARE1YCR048W 1833 nt11.55□□□□□ -0.56
YBR220CP38318 SSA1YAL005C 1929 nt11.52□□□□□ -0.56
YBR220CP38318 PUN1YLR414C 792 nt11.51□□□□□ -0.57
YBR220CP38318 YJR018WYJR018W 363 nt11.47□□□□□ -0.57
YBR220CP38318 YHR049C-AYHR049C-A 297 nt11.41□□□□□ -0.58
YBR220CP38318 POA1YBR022W 534 nt11.37□□□□□ -0.59
YBR220CP38318 YAL037C-BYAL037C-B 975 nt11.35□□□□□ -0.59
YBR220CP38318 RPP2BYDR382W 333 nt11.33□□□□□ -0.6
YBR220CP38318 SRB2YHR041C 633 nt11.31□□□□□ -0.6
YBR220CP38318 PTC2YER089C 1395 nt11.29□□□□□ -0.6
YBR220CP38318 YJR120WYJR120W 351 nt11.29□□□□□ -0.6
YBR220CP38318 YGR021WYGR021W 873 nt11.26□□□□□ -0.61
YBR220CP38318 YOR139CYOR139C 393 nt11.24□□□□□ -0.61
YBR220CP38318 WWM1YFL010C 636 nt11.2□□□□□ -0.62
YBR220CP38318 HOM6YJR139C 1080 nt11.18□□□□□ -0.62
YBR220CP38318 BUD23YCR047C 828 nt11.16□□□□□ -0.62
YBR220CP38318 NPL3YDR432W 1245 nt11.16□□□□□ -0.62
YBR220CP38318 NAB2YGL122C 1578 nt11.16□□□□□ -0.62
YBR220CP38318 MNP1YGL068W 585 nt11.1□□□□□ -0.63
YBR220CP38318 BDH2YAL061W 1254 nt11.1□□□□□ -0.63
YBR220CP38318 BSC6YOL137W 1494 nt11.1□□□□□ -0.63
YBR220CP38318 INM2YDR287W 879 nt11.09□□□□□ -0.63
YBR220CP38318 YFL021C-AYFL021C-A 855 nt11.08□□□□□ -0.64
YBR220CP38318 YOL037CYOL037C 354 nt11.07□□□□□ -0.64
YBR220CP38318 DAL1YIR027C 1383 nt11.04□□□□□ -0.64
YBR220CP38318 RKM5YLR137W 1104 nt11.02□□□□□ -0.65
YBR220CP38318 LSM3YLR438C-A 270 nt11.02□□□□□ -0.65
YBR220CP38318 FIS1YIL065C 468 nt10.99□□□□□ -0.65
YBR220CP38318 NVJ2YPR091C 2313 nt10.99□□□□□ -0.65
YBR220CP38318 FPR4YLR449W 1179 nt10.98□□□□□ -0.65
YBR220CP38318 YBL100CYBL100C 315 nt10.98□□□□□ -0.65
YBR220CP38318 PAC11YDR488C 1602 nt10.97□□□□□ -0.65
YBR220CP38318 PHO4YFR034C 939 nt10.92□□□□□ -0.66
YBR220CP38318 FPS1YLL043W 2010 nt10.89□□□□□ -0.67
YBR220CP38318 TRM9YML014W 840 nt10.87□□□□□ -0.67
YBR220CP38318 FUN26YAL022C 1554 nt10.84□□□□□ -0.67
YBR220CP38318 tM(CAU)CtM(CAU)C 72 nt10.8□□□□□ -0.68
YBR220CP38318 IMT4tM(CAU)E 72 nt10.8□□□□□ -0.68
YBR220CP38318 IMT3tM(CAU)J3 72 nt10.8□□□□□ -0.68
YBR220CP38318 IMT1tM(CAU)O1 72 nt10.8□□□□□ -0.68
YBR220CP38318 IMT2tM(CAU)P 72 nt10.8□□□□□ -0.68
YBR220CP38318 YLR281CYLR281C 468 nt10.77□□□□□ -0.69
YBR220CP38318 CCT6YDR188W 1641 nt10.75□□□□□ -0.69
YBR220CP38318 SSA4YER103W 1929 nt10.72□□□□□ -0.69
YBR220CP38318 WHI5YOR083W 888 nt10.7□□□□□ -0.7
YBR220CP38318 PUS2YGL063W 1113 nt10.69□□□□□ -0.7
YBR220CP38318 SUF2tP(AGG)C 72 nt10.68□□□□□ -0.7
YBR220CP38318 SUF10tP(AGG)N 72 nt10.68□□□□□ -0.7
YBR220CP38318 ALF1YNL148C 765 nt10.68□□□□□ -0.7
YBR220CP38318 YPS1YLR120C 1710 nt10.64□□□□□ -0.71
Retrieved 100 of 7,029 protein–RNA pairs in 11.8 ms