RNA–Protein interactions for RNA: YHR200W

RPN10, Transcript of Non-ATPase base subunit of the 19S RP of the 26S proteasome, yeastyeast

Gene RPN10, Length 807 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN10YHR200W OSH7P38755 437 aa11.86□□□□□ -0.51
RPN10YHR200W YGR210CP42942 411 aa11.86□□□□□ -0.51
RPN10YHR200W NIF3P53081 288 aa11.86□□□□□ -0.51
RPN10YHR200W OKP1P53298 406 aa11.86□□□□□ -0.51
RPN10YHR200W RTT103Q05543 409 aa11.86□□□□□ -0.51
RPN10YHR200W FCY22Q12119 530 aa11.86□□□□□ -0.51
RPN10YHR200W YLL053CP0CD98 152 aa11.85□□□□□ -0.51
RPN10YHR200W IMP1P28627 190 aa11.85□□□□□ -0.51
RPN10YHR200W FIG1P38224 298 aa11.85□□□□□ -0.51
RPN10YHR200W YGP1P38616 354 aaKnown RBP11.85□□□□□ -0.51
RPN10YHR200W SLX9P53251 210 aaPredicted RBP11.85□□□□□ -0.51
RPN10YHR200W MEH1Q02205 184 aa11.85□□□□□ -0.51
RPN10YHR200W YLR224WQ05947 369 aa11.85□□□□□ -0.51
RPN10YHR200W LIP2Q06005 328 aa11.85□□□□□ -0.51
RPN10YHR200W YLR365WQ7LIF2 110 aa11.85□□□□□ -0.51
RPN10YHR200W MIR1P23641 311 aaKnown RBP11.84□□□□□ -0.51
RPN10YHR200W RPL13BP40212 199 aaKnown RBP11.84□□□□□ -0.51
RPN10YHR200W PRM5P40476 318 aa11.84□□□□□ -0.51
RPN10YHR200W RPA34P47006 233 aaPredicted RBP11.84□□□□□ -0.51
RPN10YHR200W WTM2Q12206 467 aa11.84□□□□□ -0.51
RPN10YHR200W RPL13AQ12690 199 aaPredicted RBP11.84□□□□□ -0.51
RPN10YHR200W MEC1P38111 2368 aa11.83□□□□□ -0.52
RPN10YHR200W FUS3P16892 353 aaKnown RBP11.83□□□□□ -0.52
RPN10YHR200W MAG1P22134 296 aaKnown RBP11.83□□□□□ -0.52
RPN10YHR200W YKL107WP34251 309 aa11.83□□□□□ -0.52
RPN10YHR200W NTC20P38302 140 aaPredicted RBP11.83□□□□□ -0.52
RPN10YHR200W IRC24P40580 263 aa11.83□□□□□ -0.52
RPN10YHR200W YOL029CQ08187 201 aa11.83□□□□□ -0.52
RPN10YHR200W BBP1Q12365 385 aa11.83□□□□□ -0.52
RPN10YHR200W MPD1Q12404 318 aaKnown RBP11.83□□□□□ -0.52
RPN10YHR200W SSA3P09435 649 aaKnown RBP11.82□□□□□ -0.52
RPN10YHR200W SEN2P16658 377 aa11.82□□□□□ -0.52
RPN10YHR200W CKS1P20486 150 aaKnown RBP11.82□□□□□ -0.52
RPN10YHR200W OLE1P21147 510 aaKnown RBP11.82□□□□□ -0.52
RPN10YHR200W SKO1Q02100 647 aa11.82□□□□□ -0.52
RPN10YHR200W YMR279CQ03263 540 aa11.82□□□□□ -0.52
RPN10YHR200W PRP11Q07350 266 aaPredicted RBP11.82□□□□□ -0.52
RPN10YHR200W RTR2Q12378 196 aa11.82□□□□□ -0.52
RPN10YHR200W QCR2P07257 368 aa11.81□□□□□ -0.52
RPN10YHR200W YOX1P34161 385 aa11.81□□□□□ -0.52
RPN10YHR200W YUH1P35127 236 aa11.81□□□□□ -0.52
RPN10YHR200W PHM8P40025 321 aa11.81□□□□□ -0.52
RPN10YHR200W GMC1Q04399 608 aa11.81□□□□□ -0.52
RPN10YHR200W TRA1P38811 3744 aa11.81□□□□□ -0.52
RPN10YHR200W AGA2P32781 87 aa11.8□□□□□ -0.52
RPN10YHR200W EDS1P38073 919 aa11.8□□□□□ -0.52
RPN10YHR200W YCK3P39962 524 aa11.8□□□□□ -0.52
RPN10YHR200W UBP8P50102 471 aa11.8□□□□□ -0.52
RPN10YHR200W THI74Q04083 370 aa11.8□□□□□ -0.52
RPN10YHR200W NOC4Q06512 552 aaPredicted RBP11.8□□□□□ -0.52
RPN10YHR200W FRE8Q12209 686 aa11.8□□□□□ -0.52
RPN10YHR200W ISN1Q99312 450 aa11.8□□□□□ -0.52
RPN10YHR200W CDC39P25655 2108 aaKnown RBP11.8□□□□□ -0.52
RPN10YHR200W RPB7P34087 171 aa11.79□□□□□ -0.52
RPN10YHR200W SWD3P38123 315 aa11.79□□□□□ -0.52
RPN10YHR200W YNL046WP53956 172 aa11.79□□□□□ -0.52
RPN10YHR200W GAT3Q07928 141 aa11.79□□□□□ -0.52
RPN10YHR200W YCT1Q12235 531 aa11.79□□□□□ -0.52
RPN10YHR200W TPI1P00942 248 aaKnown RBP11.78□□□□□ -0.52
RPN10YHR200W YCR061WP25639 631 aa11.78□□□□□ -0.52
RPN10YHR200W POP2P39008 433 aa11.78□□□□□ -0.52
RPN10YHR200W RMD6P39975 231 aa11.78□□□□□ -0.52
RPN10YHR200W YIR035CP40579 254 aa11.78□□□□□ -0.52
RPN10YHR200W SNX4P47057 423 aa11.78□□□□□ -0.52
RPN10YHR200W SED1Q01589 338 aa11.78□□□□□ -0.52
RPN10YHR200W DPB4Q04603 196 aaKnown RBP11.78□□□□□ -0.52
RPN10YHR200W WSC3Q12215 556 aa11.78□□□□□ -0.52
RPN10YHR200W YPR108W-AQ3E7B3 70 aa11.78□□□□□ -0.52
RPN10YHR200W VMA3P25515 160 aa11.77□□□□□ -0.53
RPN10YHR200W MNS1P32906 549 aa11.77□□□□□ -0.53
RPN10YHR200W SHM2P37291 469 aaKnown RBP11.77□□□□□ -0.53
RPN10YHR200W YER121WP40076 114 aa11.77□□□□□ -0.53
RPN10YHR200W YNL092WP53934 400 aa11.77□□□□□ -0.53
RPN10YHR200W FIT1Q04433 528 aa11.77□□□□□ -0.53
RPN10YHR200W ECM18Q04623 453 aa11.77□□□□□ -0.53
RPN10YHR200W PML1Q07930 204 aaPredicted RBP11.77□□□□□ -0.53
RPN10YHR200W FEX1Q08913 375 aa11.77□□□□□ -0.53
RPN10YHR200W FEX2Q08991 375 aa11.77□□□□□ -0.53
RPN10YHR200W DGK1Q12382 290 aa11.77□□□□□ -0.53
RPN10YHR200W TCA17P32613 152 aa11.76□□□□□ -0.53
RPN10YHR200W SWD2P36104 329 aaPredicted RBP11.76□□□□□ -0.53
RPN10YHR200W XPT1P47165 209 aa11.76□□□□□ -0.53
RPN10YHR200W JAC1P53193 184 aa11.76□□□□□ -0.53
RPN10YHR200W ACT1P60010 375 aaKnown RBP11.76□□□□□ -0.53
RPN10YHR200W COA4Q05809 96 aa11.76□□□□□ -0.53
RPN10YHR200W RPL43AP0CX25 92 aaKnown RBP11.75□□□□□ -0.53
RPN10YHR200W RPL43BP0CX26 92 aa11.75□□□□□ -0.53
RPN10YHR200W DAL80P26343 269 aa11.75□□□□□ -0.53
RPN10YHR200W SPC29P33419 253 aa11.75□□□□□ -0.53
RPN10YHR200W PAC2P39937 518 aa11.75□□□□□ -0.53
RPN10YHR200W SLM1P40485 686 aa11.75□□□□□ -0.53
RPN10YHR200W GON7P46984 123 aa11.75□□□□□ -0.53
RPN10YHR200W BNA2P47125 453 aa11.75□□□□□ -0.53
RPN10YHR200W ORM1P53224 222 aa11.75□□□□□ -0.53
RPN10YHR200W TSA2Q04120 196 aa11.75□□□□□ -0.53
RPN10YHR200W TFC7Q12415 435 aa11.75□□□□□ -0.53
RPN10YHR200W ISC10P32645 267 aa11.74□□□□□ -0.53
RPN10YHR200W ERV15P38312 142 aa11.74□□□□□ -0.53
RPN10YHR200W SYG1P40528 902 aa11.74□□□□□ -0.53
RPN10YHR200W QRI1P43123 477 aaKnown RBP11.74□□□□□ -0.53
Retrieved 100 of 5,963 RNA–protein pairs in 36.7 ms