RNA–Protein interactions for RNA: YKL112W

ABF1, Transcript of DNA binding protein with possible chromatin-reorganizing activity, yeast

Gene ABF1, Length 2,196 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ABF1	YKL112W	LST7	P53237	242 aa		4.18	□□□□□ -1.74
ABF1	YKL112W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.18	□□□□□ -1.74	not detected
ABF1	YKL112W	YNL165W	P53891	406 aa		4.18	□□□□□ -1.74
ABF1	YKL112W	ARK1	P53974	638 aa		4.18	□□□□□ -1.74
ABF1	YKL112W	SUR7	P54003	302 aa		4.18	□□□□□ -1.74
ABF1	YKL112W	CAC2	Q04199	468 aa		4.18	□□□□□ -1.74
ABF1	YKL112W	STP3	Q05937	343 aa		4.18	□□□□□ -1.74
ABF1	YKL112W	ALG6	Q12001	544 aa	Known RBP	4.18	□□□□□ -1.74
ABF1	YKL112W	PFA4	Q12006	378 aa		4.18	□□□□□ -1.74
ABF1	YKL112W	MDM32	Q12171	622 aa		4.18	□□□□□ -1.74
ABF1	YKL112W	RPL31A	P0C2H8	113 aa	Known RBP	4.17	□□□□□ -1.74
ABF1	YKL112W	RPL31B	P0C2H9	113 aa	Known RBP	4.17	□□□□□ -1.74
ABF1	YKL112W	DCG1	P32460	244 aa		4.17	□□□□□ -1.74
ABF1	YKL112W	NAB2	P32505	525 aa	Known RBP RIP-Chip data	4.17	□□□□□ -1.74	not detected
ABF1	YKL112W	YSC83	P32792	385 aa		4.17	□□□□□ -1.74
ABF1	YKL112W	REC114	P32841	428 aa		4.17	□□□□□ -1.74
ABF1	YKL112W	YHR078W	P38799	552 aa		4.17	□□□□□ -1.74
ABF1	YKL112W	CHS7	P38843	316 aa		4.17	□□□□□ -1.74
ABF1	YKL112W	GTF1	P53260	183 aa	Predicted RBP	4.17	□□□□□ -1.74
ABF1	YKL112W	HHO1	P53551	258 aa		4.17	□□□□□ -1.74
ABF1	YKL112W	SEC13	Q04491	297 aa	Known RBP	4.17	□□□□□ -1.74
ABF1	YKL112W	TAF9	Q05027	157 aa		4.17	□□□□□ -1.74
ABF1	YKL112W	COQ11	Q05892	277 aa		4.17	□□□□□ -1.74
ABF1	YKL112W	YHC1	Q05900	231 aa	Known RBP	4.17	□□□□□ -1.74
ABF1	YKL112W	AIM6	Q07716	390 aa		4.17	□□□□□ -1.74
ABF1	YKL112W	TRM10	Q12400	293 aa		4.17	□□□□□ -1.74
ABF1	YKL112W	YBR056W-A	I2HB52	66 aa		4.17	□□□□□ -1.74
ABF1	YKL112W	YER039C-A	P0CD97	72 aa		4.17	□□□□□ -1.74
ABF1	YKL112W	RPL43A	P0CX25	92 aa	Known RBP	4.17	□□□□□ -1.74
ABF1	YKL112W	RPL43B	P0CX26	92 aa		4.17	□□□□□ -1.74
ABF1	YKL112W	MGT1	P26188	188 aa		4.17	□□□□□ -1.74
ABF1	YKL112W	CDC20	P26309	610 aa		4.17	□□□□□ -1.74
ABF1	YKL112W	STE14	P32584	239 aa		4.17	□□□□□ -1.74
ABF1	YKL112W	RPS20	P38701	121 aa	Known RBP	4.17	□□□□□ -1.74
ABF1	YKL112W	YHL044W	P38727	235 aa		4.17	□□□□□ -1.74
ABF1	YKL112W	YPS6	P40583	537 aa		4.17	□□□□□ -1.74
ABF1	YKL112W	HAC1	P41546	238 aa		4.17	□□□□□ -1.74
ABF1	YKL112W	CHA4	P43634	648 aa		4.17	□□□□□ -1.74
ABF1	YKL112W	SKP1	P52286	194 aa		4.17	□□□□□ -1.74
ABF1	YKL112W	UBC11	P52492	156 aa		4.17	□□□□□ -1.74
ABF1	YKL112W	CRZ1	P53968	678 aa		4.17	□□□□□ -1.74
ABF1	YKL112W	YPL068C	Q02749	293 aa		4.17	□□□□□ -1.74
ABF1	YKL112W	MDM30	Q05930	598 aa		4.17	□□□□□ -1.74
ABF1	YKL112W	IRC13	Q08630	104 aa		4.17	□□□□□ -1.74
ABF1	YKL112W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.17	□□□□□ -1.74	not detected
ABF1	YKL112W	LCB4	Q12246	624 aa		4.17	□□□□□ -1.74
ABF1	YKL112W	RIB2	Q12362	591 aa	Known RBP	4.17	□□□□□ -1.74
ABF1	YKL112W	RPL28	P02406	149 aa	Known RBP	4.16	□□□□□ -1.74
ABF1	YKL112W	YLL053C	P0CD98	152 aa		4.16	□□□□□ -1.74
ABF1	YKL112W	AMD1	P15274	810 aa	Known RBP	4.16	□□□□□ -1.74
ABF1	YKL112W	ERD1	P16151	362 aa		4.16	□□□□□ -1.74
ABF1	YKL112W	YCR102C	P25608	368 aa		4.16	□□□□□ -1.74
ABF1	YKL112W	DSS4	P32601	143 aa		4.16	□□□□□ -1.74
ABF1	YKL112W	YGP1	P38616	354 aa	Known RBP	4.16	□□□□□ -1.74
ABF1	YKL112W	AYR1	P40471	297 aa		4.16	□□□□□ -1.74
ABF1	YKL112W	MEP2	P41948	499 aa		4.16	□□□□□ -1.74
ABF1	YKL112W	YFR020W	P43600	232 aa		4.16	□□□□□ -1.74
ABF1	YKL112W	PTR3	P43606	678 aa		4.16	□□□□□ -1.74
ABF1	YKL112W	TAX4	P47030	604 aa		4.16	□□□□□ -1.74
ABF1	YKL112W	TRM9	P49957	279 aa		4.16	□□□□□ -1.74
ABF1	YKL112W	SOK2	P53438	785 aa	Predicted RBP	4.16	□□□□□ -1.74
ABF1	YKL112W	BIO4	P53630	237 aa		4.16	□□□□□ -1.74
ABF1	YKL112W	RHO4	Q00246	291 aa		4.16	□□□□□ -1.74
ABF1	YKL112W	HNT1	Q04344	158 aa	Known RBP	4.16	□□□□□ -1.74
ABF1	YKL112W	CTR3	Q06686	241 aa		4.16	□□□□□ -1.74
ABF1	YKL112W	STP4	Q07351	490 aa		4.16	□□□□□ -1.74
ABF1	YKL112W	PEX27	Q08580	376 aa		4.16	□□□□□ -1.74
ABF1	YKL112W	SIA1	Q12212	622 aa		4.16	□□□□□ -1.74
ABF1	YKL112W	POM34	Q12445	299 aa		4.16	□□□□□ -1.74
ABF1	YKL112W	YLR462W	O13556	202 aa		4.16	□□□□□ -1.74
ABF1	YKL112W	YBR085C-A	O43137	85 aa		4.16	□□□□□ -1.74
ABF1	YKL112W	MF(ALPHA)1	P01149	165 aa		4.16	□□□□□ -1.74
ABF1	YKL112W	STE7	P06784	515 aa		4.16	□□□□□ -1.74
ABF1	YKL112W	YKR104W	P0CE69	306 aa		4.16	□□□□□ -1.74
ABF1	YKL112W	YML003W	P0CF16	290 aa		4.16	□□□□□ -1.74
ABF1	YKL112W	SNF5	P18480	905 aa		4.16	□□□□□ -1.74
ABF1	YKL112W	EXO70	P19658	623 aa		4.16	□□□□□ -1.74
ABF1	YKL112W	FEN2	P25621	512 aa	Known RBP	4.16	□□□□□ -1.74
ABF1	YKL112W	ARO2	P28777	376 aa	Known RBP	4.16	□□□□□ -1.74
ABF1	YKL112W	HOM6	P31116	359 aa	Known RBP	4.16	□□□□□ -1.74
ABF1	YKL112W	PRO1	P32264	428 aa		4.16	□□□□□ -1.74
ABF1	YKL112W	PPZ2	P33329	710 aa		4.16	□□□□□ -1.74
ABF1	YKL112W	HES1	P35843	434 aa		4.16	□□□□□ -1.74
ABF1	YKL112W	YKL151C	P36059	337 aa		4.16	□□□□□ -1.74
ABF1	YKL112W	AVT5	P38176	459 aa		4.16	□□□□□ -1.74
ABF1	YKL112W	QDR3	P38227	689 aa		4.16	□□□□□ -1.74
ABF1	YKL112W	EHT1	P38295	451 aa		4.16	□□□□□ -1.74
ABF1	YKL112W	DOG1	P38774	246 aa		4.16	□□□□□ -1.74
ABF1	YKL112W	AIM23	P47015	356 aa		4.16	□□□□□ -1.74
ABF1	YKL112W	YJR015W	P47090	510 aa		4.16	□□□□□ -1.74
ABF1	YKL112W	MIC26	P50087	233 aa		4.16	□□□□□ -1.74
ABF1	YKL112W	ELC1	Q03071	99 aa		4.16	□□□□□ -1.74
ABF1	YKL112W	HOF1	Q05080	669 aa		4.16	□□□□□ -1.74
ABF1	YKL112W	ATG10	Q07879	167 aa		4.16	□□□□□ -1.74
ABF1	YKL112W	CYC7	P00045	113 aa		4.15	□□□□□ -1.75
ABF1	YKL112W	HIS1	P00498	297 aa	Known RBP	4.15	□□□□□ -1.75
ABF1	YKL112W	RHO2	P06781	192 aa		4.15	□□□□□ -1.75
ABF1	YKL112W	SNC2	P33328	115 aa		4.15	□□□□□ -1.75
ABF1	YKL112W	NTF2	P33331	125 aa	Known RBP	4.15	□□□□□ -1.75
ABF1	YKL112W	SKN1	P33336	771 aa		4.15	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 21.9 ms