Protein–RNA interactions for Protein: P52286

SKP1, Suppressor of kinetochore protein 1, yeastyeast

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SKP1P52286 NSR1YGR159C 1245 nt17.43■□□□□ 0.38
SKP1P52286 YML009W-BYML009W-B 477 nt17.3■□□□□ 0.36
SKP1P52286 NOP1YDL014W 984 nt16.75■□□□□ 0.27
SKP1P52286 MDJ1YFL016C 1536 nt15.72■□□□□ 0.11
SKP1P52286 YKL036CYKL036C 393 nt15.14■□□□□ 0.01
SKP1P52286 SRX1YKL086W 384 nt14.57□□□□□ -0.08
SKP1P52286 YJL027CYJL027C 417 nt14.54□□□□□ -0.08
SKP1P52286 Q0297Q0297 156 nt14.49□□□□□ -0.09
SKP1P52286 YCR051WYCR051W 669 nt13.83□□□□□ -0.2
SKP1P52286 DBP2YNL112W 1641 nt13.73□□□□□ -0.21
SKP1P52286 Q0182Q0182 405 nt13.64□□□□□ -0.23
SKP1P52286 SCS3YGL126W 1143 nt13.59□□□□□ -0.23
SKP1P52286 YBR190WYBR190W 312 nt13.51□□□□□ -0.25
SKP1P52286 MOT3YMR070W 1473 nt13.49□□□□□ -0.25
SKP1P52286 TRN1tP(UGG)A 72 nt13.33□□□□□ -0.28
SKP1P52286 SUF9tP(UGG)F 72 nt13.33□□□□□ -0.28
SKP1P52286 SUF8tP(UGG)H 72 nt13.33□□□□□ -0.28
SKP1P52286 tP(UGG)LtP(UGG)L 72 nt13.33□□□□□ -0.28
SKP1P52286 SUF7tP(UGG)M 72 nt13.33□□□□□ -0.28
SKP1P52286 tP(UGG)N1tP(UGG)N1 72 nt13.33□□□□□ -0.28
SKP1P52286 tP(UGG)N2tP(UGG)N2 72 nt13.33□□□□□ -0.28
SKP1P52286 tP(UGG)O1tP(UGG)O1 72 nt13.33□□□□□ -0.28
SKP1P52286 SUF11tP(UGG)O2 72 nt13.33□□□□□ -0.28
SKP1P52286 RTC3YHR087W 336 nt13.23□□□□□ -0.29
SKP1P52286 CCC1YLR220W 969 nt13.21□□□□□ -0.29
SKP1P52286 YOL085CYOL085C 342 nt13.08□□□□□ -0.32
SKP1P52286 RPP1BYDL130W 321 nt13.02□□□□□ -0.33
SKP1P52286 RVS167YDR388W 1449 nt13□□□□□ -0.33
SKP1P52286 PKP1YIL042C 1185 nt12.91□□□□□ -0.34
SKP1P52286 SSA3YBL075C 1950 nt12.88□□□□□ -0.35
SKP1P52286 SCJ1YMR214W 1134 nt12.75□□□□□ -0.37
SKP1P52286 YGR139WYGR139W 339 nt12.55□□□□□ -0.4
SKP1P52286 tP(UGG)O3tP(UGG)O3 72 nt12.52□□□□□ -0.41
SKP1P52286 PET122YER153C 765 nt12.44□□□□□ -0.42
SKP1P52286 PUT4YOR348C 1884 nt12.43□□□□□ -0.42
SKP1P52286 SHR5YOL110W 714 nt12.42□□□□□ -0.42
SKP1P52286 SCR1SCR1 522 nt12.32□□□□□ -0.44
SKP1P52286 NME1NME1 340 nt12.25□□□□□ -0.45
SKP1P52286 URN1YPR152C 1398 nt12.24□□□□□ -0.45
SKP1P52286 DEP1YAL013W 1218 nt12.13□□□□□ -0.47
SKP1P52286 OPI9YLR338W 858 nt12.13□□□□□ -0.47
SKP1P52286 YDJ1YNL064C 1230 nt12.13□□□□□ -0.47
SKP1P52286 ARE1YCR048W 1833 nt12.11□□□□□ -0.47
SKP1P52286 SAH1YER043C 1350 nt12.09□□□□□ -0.47
SKP1P52286 RPN10YHR200W 807 nt12.08□□□□□ -0.48
SKP1P52286 ATS1YAL020C 1002 nt12.06□□□□□ -0.48
SKP1P52286 RRN5YLR141W 1092 nt12.05□□□□□ -0.48
SKP1P52286 POA1YBR022W 534 nt12.03□□□□□ -0.48
SKP1P52286 YHR049C-AYHR049C-A 297 nt12.01□□□□□ -0.49
SKP1P52286 YNL208WYNL208W 600 nt11.96□□□□□ -0.49
SKP1P52286 GAR1YHR089C 618 nt11.9□□□□□ -0.5
SKP1P52286 BSC6YOL137W 1494 nt11.83□□□□□ -0.52
SKP1P52286 YER088W-BYER088W-B 147 nt11.81□□□□□ -0.52
SKP1P52286 PUN1YLR414C 792 nt11.81□□□□□ -0.52
SKP1P52286 RSB1YOR049C 1065 nt11.77□□□□□ -0.53
SKP1P52286 BUD23YCR047C 828 nt11.74□□□□□ -0.53
SKP1P52286 PTC2YER089C 1395 nt11.67□□□□□ -0.54
SKP1P52286 YJR018WYJR018W 363 nt11.67□□□□□ -0.54
SKP1P52286 NAB2YGL122C 1578 nt11.58□□□□□ -0.55
SKP1P52286 TIR1YER011W 765 nt11.52□□□□□ -0.57
SKP1P52286 CSM2YIL132C 642 nt11.48□□□□□ -0.57
SKP1P52286 RPP2BYDR382W 333 nt11.42□□□□□ -0.58
SKP1P52286 SSA1YAL005C 1929 nt11.39□□□□□ -0.59
SKP1P52286 DAL1YIR027C 1383 nt11.38□□□□□ -0.59
SKP1P52286 SPT5YML010W 3192 nt11.36□□□□□ -0.59
SKP1P52286 FPR4YLR449W 1179 nt11.36□□□□□ -0.59
SKP1P52286 FIS1YIL065C 468 nt11.34□□□□□ -0.59
SKP1P52286 YJR120WYJR120W 351 nt11.33□□□□□ -0.6
SKP1P52286 INM2YDR287W 879 nt11.31□□□□□ -0.6
SKP1P52286 PHO4YFR034C 939 nt11.25□□□□□ -0.61
SKP1P52286 PST2YDR032C 597 nt11.2□□□□□ -0.62
SKP1P52286 SSA4YER103W 1929 nt11.18□□□□□ -0.62
SKP1P52286 YBL100CYBL100C 315 nt11.15□□□□□ -0.62
SKP1P52286 PAU21YOR394W 495 nt11.15□□□□□ -0.62
SKP1P52286 PAU22YPL282C 495 nt11.15□□□□□ -0.62
SKP1P52286 MEP2YNL142W 1500 nt11.14□□□□□ -0.63
SKP1P52286 YPS1YLR120C 1710 nt11.12□□□□□ -0.63
SKP1P52286 BDH2YAL061W 1254 nt11.09□□□□□ -0.63
SKP1P52286 SRB2YHR041C 633 nt11.07□□□□□ -0.64
SKP1P52286 YHR165W-AYHR165W-A 312 nt11.07□□□□□ -0.64
SKP1P52286 ARO7YPR060C 771 nt11.06□□□□□ -0.64
SKP1P52286 YDR095CYDR095C 411 nt11.01□□□□□ -0.65
SKP1P52286 FUN26YAL022C 1554 nt10.99□□□□□ -0.65
SKP1P52286 ALF1YNL148C 765 nt10.96□□□□□ -0.65
SKP1P52286 TRM9YML014W 840 nt10.95□□□□□ -0.66
SKP1P52286 WWM1YFL010C 636 nt10.93□□□□□ -0.66
SKP1P52286 DCW1YKL046C 1350 nt10.92□□□□□ -0.66
SKP1P52286 PAC11YDR488C 1602 nt10.92□□□□□ -0.66
SKP1P52286 LSM3YLR438C-A 270 nt10.9□□□□□ -0.66
SKP1P52286 YGR021WYGR021W 873 nt10.86□□□□□ -0.67
SKP1P52286 YMR090WYMR090W 684 nt10.86□□□□□ -0.67
SKP1P52286 SUF2tP(AGG)C 72 nt10.82□□□□□ -0.68
SKP1P52286 SUF10tP(AGG)N 72 nt10.82□□□□□ -0.68
SKP1P52286 RPP2AYOL039W 321 nt10.82□□□□□ -0.68
SKP1P52286 CCT6YDR188W 1641 nt10.82□□□□□ -0.68
SKP1P52286 EMI2YDR516C 1503 nt10.82□□□□□ -0.68
SKP1P52286 YFL021C-AYFL021C-A 855 nt10.81□□□□□ -0.68
SKP1P52286 SHU1YHL006C 453 nt10.81□□□□□ -0.68
SKP1P52286 NVJ2YPR091C 2313 nt10.76□□□□□ -0.69
SKP1P52286 HOM6YJR139C 1080 nt10.73□□□□□ -0.69
Retrieved 100 of 7,029 protein–RNA pairs in 13.7 ms