RNA–Protein interactions for RNA: YLR006C

SSK1, Transcript of Cytoplasmic phosphorelay intermediate osmosensor and regulator, yeastyeast

Gene SSK1, Length 2,139 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSK1YLR006C DPM1P14020 267 aaKnown RBP5.24□□□□□ -1.57
SSK1YLR006C RFA2P26754 273 aaKnown RBP5.24□□□□□ -1.57
SSK1YLR006C LAC1P28496 418 aa5.24□□□□□ -1.57
SSK1YLR006C SHE1P38200 338 aa5.24□□□□□ -1.57
SSK1YLR006C RPS20P38701 121 aaKnown RBP5.24□□□□□ -1.57
SSK1YLR006C RMD6P39975 231 aa5.24□□□□□ -1.57
SSK1YLR006C HEM14P40012 539 aa5.24□□□□□ -1.57
SSK1YLR006C TIR3P40552 269 aa5.24□□□□□ -1.57
SSK1YLR006C CHA4P43634 648 aa5.24□□□□□ -1.57
SSK1YLR006C EXG2P52911 562 aa5.24□□□□□ -1.57
SSK1YLR006C YDR541CQ03049 344 aa5.24□□□□□ -1.57
SSK1YLR006C PLM2Q04383 521 aa5.24□□□□□ -1.57
SSK1YLR006C SKI7Q08491 747 aaPredicted RBP5.24□□□□□ -1.57
SSK1YLR006C YOR283WQ12040 230 aaKnown RBP5.24□□□□□ -1.57
SSK1YLR006C YPR064WQ12492 139 aa5.24□□□□□ -1.57
SSK1YLR006C SPS2P08459 502 aa5.23□□□□□ -1.57
SSK1YLR006C RPS18AP0CX55 146 aaKnown RBP5.23□□□□□ -1.57
SSK1YLR006C RPS18BP0CX56 146 aaPredicted RBP5.23□□□□□ -1.57
SSK1YLR006C URK1P27515 501 aa5.23□□□□□ -1.57
SSK1YLR006C EHD3P28817 500 aa5.23□□□□□ -1.57
SSK1YLR006C TCM62P38228 572 aaKnown RBP5.23□□□□□ -1.57
SSK1YLR006C OXA1P39952 402 aa5.23□□□□□ -1.57
SSK1YLR006C APQ12P40532 138 aa5.23□□□□□ -1.57
SSK1YLR006C PFS2P42841 465 aaKnown RBP5.23□□□□□ -1.57
SSK1YLR006C TDA1Q03533 586 aa5.23□□□□□ -1.57
SSK1YLR006C ASM4Q05166 528 aa5.23□□□□□ -1.57
SSK1YLR006C MDM30Q05930 598 aa5.23□□□□□ -1.57
SSK1YLR006C TPO3Q06451 622 aa5.23□□□□□ -1.57
SSK1YLR006C TIR4Q12218 487 aaPredicted RBP5.23□□□□□ -1.57
SSK1YLR006C FYV7Q12247 151 aa5.23□□□□□ -1.57
SSK1YLR006C CYC1P00044 109 aaPredicted RBP5.23□□□□□ -1.57
SSK1YLR006C CHO1P08456 276 aa5.23□□□□□ -1.57
SSK1YLR006C SRB5P32585 307 aa5.23□□□□□ -1.57
SSK1YLR006C LST4P34239 828 aa5.23□□□□□ -1.57
SSK1YLR006C NAT2P37293 288 aa5.23□□□□□ -1.57
SSK1YLR006C SCO2P38072 301 aa5.23□□□□□ -1.57
SSK1YLR006C RTC2P38279 296 aa5.23□□□□□ -1.57
SSK1YLR006C PYK2P52489 506 aaKnown RBP5.23□□□□□ -1.57
SSK1YLR006C TIM44Q01852 431 aa5.23□□□□□ -1.57
SSK1YLR006C AIM36Q03798 255 aa5.23□□□□□ -1.57
SSK1YLR006C ELP6Q04868 273 aa5.23□□□□□ -1.57
SSK1YLR006C DPP1Q05521 289 aa5.23□□□□□ -1.57
SSK1YLR006C DAP1Q12091 152 aa5.23□□□□□ -1.57
SSK1YLR006C ERG27Q12452 347 aaKnown RBP5.23□□□□□ -1.57
SSK1YLR006C YLR099W-AQ3E798 87 aa5.23□□□□□ -1.57
SSK1YLR006C NAM2P11325 894 aa5.22□□□□□ -1.57
SSK1YLR006C CUP2P15315 225 aa5.22□□□□□ -1.57
SSK1YLR006C YCR102CP25608 368 aa5.22□□□□□ -1.57
SSK1YLR006C UGX2P32772 223 aa5.22□□□□□ -1.57
SSK1YLR006C TMA19P35691 167 aaKnown RBP5.22□□□□□ -1.57
SSK1YLR006C LSB6P42951 607 aa5.22□□□□□ -1.57
SSK1YLR006C MSO1P53604 210 aaKnown RBP5.22□□□□□ -1.57
SSK1YLR006C ARL3Q02804 198 aa5.22□□□□□ -1.57
SSK1YLR006C MSS11Q03825 758 aa5.22□□□□□ -1.57
SSK1YLR006C CTK1Q03957 528 aaKnown RBP5.22□□□□□ -1.57
SSK1YLR006C MHR1Q06630 226 aa5.22□□□□□ -1.57
SSK1YLR006C POS5Q06892 414 aa5.22□□□□□ -1.57
SSK1YLR006C BSC1Q12140 328 aa5.22□□□□□ -1.57
SSK1YLR006C TY1A-DR3Q12441 440 aa5.22□□□□□ -1.57
SSK1YLR006C RRI1Q12468 440 aa5.22□□□□□ -1.57
SSK1YLR006C VPS13Q07878 3144 aa5.21□□□□□ -1.57
SSK1YLR006C MCK1P21965 375 aaKnown RBP5.21□□□□□ -1.57
SSK1YLR006C CTS1P29029 562 aa5.21□□□□□ -1.57
SSK1YLR006C TRR1P29509 319 aaKnown RBP5.21□□□□□ -1.57
SSK1YLR006C SKN1P33336 771 aa5.21□□□□□ -1.57
SSK1YLR006C MRPL3P36516 390 aa5.21□□□□□ -1.57
SSK1YLR006C WSC4P38739 605 aa5.21□□□□□ -1.57
SSK1YLR006C GGC1P38988 300 aa5.21□□□□□ -1.57
SSK1YLR006C VPS52P39904 641 aa5.21□□□□□ -1.57
SSK1YLR006C YFR020WP43600 232 aa5.21□□□□□ -1.57
SSK1YLR006C NUP57P48837 541 aa5.21□□□□□ -1.57
SSK1YLR006C PHB2P50085 310 aa5.21□□□□□ -1.57
SSK1YLR006C ERG26P53199 349 aaKnown RBP5.21□□□□□ -1.57
SSK1YLR006C PCL9Q12477 304 aa5.21□□□□□ -1.57
SSK1YLR006C YGL194C-AQ2V2P6 80 aa5.21□□□□□ -1.57
SSK1YLR006C AAC1P04710 309 aa5.21□□□□□ -1.58
SSK1YLR006C DAL82P21705 255 aa5.21□□□□□ -1.58
SSK1YLR006C HCM1P25364 564 aa5.21□□□□□ -1.58
SSK1YLR006C SHE2P36068 246 aaKnown RBP RIP-Chip data5.21□□□□□ -1.58not detected
SSK1YLR006C BNA4P38169 460 aa5.21□□□□□ -1.58
SSK1YLR006C BMT5P40493 336 aa5.21□□□□□ -1.58
SSK1YLR006C NCE103P53615 221 aa5.21□□□□□ -1.58
SSK1YLR006C MRPS16Q02608 121 aa5.21□□□□□ -1.58
SSK1YLR006C OST6Q03723 332 aa5.21□□□□□ -1.58
SSK1YLR006C YLR224WQ05947 369 aa5.21□□□□□ -1.58
SSK1YLR006C YPR091CQ06833 770 aa5.21□□□□□ -1.58
SSK1YLR006C MRX9Q07349 420 aaKnown RBP5.21□□□□□ -1.58
SSK1YLR006C RRP40Q08285 240 aaKnown RBP5.21□□□□□ -1.58
SSK1YLR006C SPC3Q12133 184 aa5.21□□□□□ -1.58
SSK1YLR006C YOR214CQ12282 236 aa5.21□□□□□ -1.58
SSK1YLR006C RNA15P25299 296 aaPredicted RBP5.2□□□□□ -1.58
SSK1YLR006C PUT3P25502 979 aaPredicted RBP5.2□□□□□ -1.58
SSK1YLR006C RRP4P38792 359 aaKnown RBP5.2□□□□□ -1.58
SSK1YLR006C LSM12P38828 187 aaKnown RBP5.2□□□□□ -1.58
SSK1YLR006C MET30P39014 640 aa5.2□□□□□ -1.58
SSK1YLR006C SNM1P40993 198 aa5.2□□□□□ -1.58
SSK1YLR006C MGA1P53050 456 aa5.2□□□□□ -1.58
SSK1YLR006C CWC27Q02770 301 aa5.2□□□□□ -1.58
SSK1YLR006C ADH6Q04894 360 aaKnown RBP5.2□□□□□ -1.58
SSK1YLR006C ATG10Q07879 167 aa5.2□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 55.9 ms