Protein–RNA interactions for Protein: P15315

CUP2, Transcriptional activator protein CUP2, yeastyeast

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CUP2P15315 NSR1YGR159C 1245 nt15.56■□□□□ 0.08
CUP2P15315 YML009W-BYML009W-B 477 nt15.14■□□□□ 0.01
CUP2P15315 NOP1YDL014W 984 nt14.52□□□□□ -0.09
CUP2P15315 MDJ1YFL016C 1536 nt14.29□□□□□ -0.12
CUP2P15315 YJL027CYJL027C 417 nt13.13□□□□□ -0.31
CUP2P15315 YKL036CYKL036C 393 nt12.9□□□□□ -0.34
CUP2P15315 SRX1YKL086W 384 nt12.7□□□□□ -0.38
CUP2P15315 Q0297Q0297 156 nt12.57□□□□□ -0.4
CUP2P15315 DBP2YNL112W 1641 nt12.48□□□□□ -0.41
CUP2P15315 YBR190WYBR190W 312 nt12.35□□□□□ -0.43
CUP2P15315 SSA3YBL075C 1950 nt12.21□□□□□ -0.45
CUP2P15315 RTC3YHR087W 336 nt11.98□□□□□ -0.49
CUP2P15315 YCR051WYCR051W 669 nt11.95□□□□□ -0.5
CUP2P15315 TRN1tP(UGG)A 72 nt11.82□□□□□ -0.52
CUP2P15315 SUF9tP(UGG)F 72 nt11.82□□□□□ -0.52
CUP2P15315 SUF8tP(UGG)H 72 nt11.82□□□□□ -0.52
CUP2P15315 tP(UGG)LtP(UGG)L 72 nt11.82□□□□□ -0.52
CUP2P15315 SUF7tP(UGG)M 72 nt11.82□□□□□ -0.52
CUP2P15315 tP(UGG)N1tP(UGG)N1 72 nt11.82□□□□□ -0.52
CUP2P15315 tP(UGG)N2tP(UGG)N2 72 nt11.82□□□□□ -0.52
CUP2P15315 tP(UGG)O1tP(UGG)O1 72 nt11.82□□□□□ -0.52
CUP2P15315 SUF11tP(UGG)O2 72 nt11.82□□□□□ -0.52
CUP2P15315 PUT4YOR348C 1884 nt11.65□□□□□ -0.54
CUP2P15315 CCC1YLR220W 969 nt11.61□□□□□ -0.55
CUP2P15315 RVS167YDR388W 1449 nt11.55□□□□□ -0.56
CUP2P15315 SCS3YGL126W 1143 nt11.55□□□□□ -0.56
CUP2P15315 SCJ1YMR214W 1134 nt11.43□□□□□ -0.58
CUP2P15315 ARE1YCR048W 1833 nt11.27□□□□□ -0.61
CUP2P15315 RPP1BYDL130W 321 nt11.26□□□□□ -0.61
CUP2P15315 YOL085CYOL085C 342 nt11.2□□□□□ -0.62
CUP2P15315 POA1YBR022W 534 nt11.19□□□□□ -0.62
CUP2P15315 YHR049C-AYHR049C-A 297 nt11.09□□□□□ -0.63
CUP2P15315 SAH1YER043C 1350 nt11.08□□□□□ -0.64
CUP2P15315 BSC6YOL137W 1494 nt11.07□□□□□ -0.64
CUP2P15315 SPT5YML010W 3192 nt11.07□□□□□ -0.64
CUP2P15315 SHR5YOL110W 714 nt11.06□□□□□ -0.64
CUP2P15315 URN1YPR152C 1398 nt11.05□□□□□ -0.64
CUP2P15315 PKP1YIL042C 1185 nt11.05□□□□□ -0.64
CUP2P15315 OPI9YLR338W 858 nt11.03□□□□□ -0.64
CUP2P15315 tP(UGG)O3tP(UGG)O3 72 nt10.98□□□□□ -0.65
CUP2P15315 SSA4YER103W 1929 nt10.88□□□□□ -0.67
CUP2P15315 DEP1YAL013W 1218 nt10.86□□□□□ -0.67
CUP2P15315 PET122YER153C 765 nt10.81□□□□□ -0.68
CUP2P15315 RPN10YHR200W 807 nt10.77□□□□□ -0.69
CUP2P15315 BUD23YCR047C 828 nt10.75□□□□□ -0.69
CUP2P15315 PUN1YLR414C 792 nt10.7□□□□□ -0.7
CUP2P15315 YNL208WYNL208W 600 nt10.68□□□□□ -0.7
CUP2P15315 YDJ1YNL064C 1230 nt10.64□□□□□ -0.71
CUP2P15315 PTC2YER089C 1395 nt10.64□□□□□ -0.71
CUP2P15315 SSA1YAL005C 1929 nt10.61□□□□□ -0.71
CUP2P15315 NAB2YGL122C 1578 nt10.6□□□□□ -0.71
CUP2P15315 BDF1YLR399C 2061 nt10.54□□□□□ -0.72
CUP2P15315 SCR1SCR1 522 nt10.53□□□□□ -0.72
CUP2P15315 YJR018WYJR018W 363 nt10.51□□□□□ -0.73
CUP2P15315 FPS1YLL043W 2010 nt10.51□□□□□ -0.73
CUP2P15315 MEP2YNL142W 1500 nt10.47□□□□□ -0.73
CUP2P15315 GAR1YHR089C 618 nt10.44□□□□□ -0.74
CUP2P15315 FIS1YIL065C 468 nt10.43□□□□□ -0.74
CUP2P15315 RRN5YLR141W 1092 nt10.42□□□□□ -0.74
CUP2P15315 TAT1YBR069C 1860 nt10.4□□□□□ -0.75
CUP2P15315 ATS1YAL020C 1002 nt10.36□□□□□ -0.75
CUP2P15315 DAL1YIR027C 1383 nt10.36□□□□□ -0.75
CUP2P15315 NVJ2YPR091C 2313 nt10.34□□□□□ -0.75
CUP2P15315 YJR120WYJR120W 351 nt10.29□□□□□ -0.76
CUP2P15315 DCW1YKL046C 1350 nt10.27□□□□□ -0.76
CUP2P15315 YPS1YLR120C 1710 nt10.27□□□□□ -0.76
CUP2P15315 PHO4YFR034C 939 nt10.26□□□□□ -0.77
CUP2P15315 FPR4YLR449W 1179 nt10.24□□□□□ -0.77
CUP2P15315 YER088W-BYER088W-B 147 nt10.23□□□□□ -0.77
CUP2P15315 PAC11YDR488C 1602 nt10.22□□□□□ -0.77
CUP2P15315 INM2YDR287W 879 nt10.21□□□□□ -0.77
CUP2P15315 YBR220CYBR220C 1683 nt10.15□□□□□ -0.79
CUP2P15315 RPP2BYDR382W 333 nt10.14□□□□□ -0.79
CUP2P15315 TIR1YER011W 765 nt10.14□□□□□ -0.79
CUP2P15315 YHR165W-AYHR165W-A 312 nt10.14□□□□□ -0.79
CUP2P15315 EMI2YDR516C 1503 nt10.12□□□□□ -0.79
CUP2P15315 YDR095CYDR095C 411 nt10.12□□□□□ -0.79
CUP2P15315 YMR090WYMR090W 684 nt10.08□□□□□ -0.8
CUP2P15315 RSB1YOR049C 1065 nt10.04□□□□□ -0.8
CUP2P15315 YDL221WYDL221W 552 nt10.03□□□□□ -0.8
CUP2P15315 YBL100CYBL100C 315 nt10.03□□□□□ -0.8
CUP2P15315 SDH1YKL148C 1923 nt10.01□□□□□ -0.81
CUP2P15315 PTP1YDL230W 1008 nt9.96□□□□□ -0.82
CUP2P15315 CAC2YML102W 1407 nt9.95□□□□□ -0.82
CUP2P15315 RPP2AYOL039W 321 nt9.91□□□□□ -0.82
CUP2P15315 FUN26YAL022C 1554 nt9.89□□□□□ -0.83
CUP2P15315 SRB2YHR041C 633 nt9.89□□□□□ -0.83
CUP2P15315 PCH2YBR186W 1695 nt9.89□□□□□ -0.83
CUP2P15315 BDH2YAL061W 1254 nt9.88□□□□□ -0.83
CUP2P15315 GUT2YIL155C 1950 nt9.87□□□□□ -0.83
CUP2P15315 Q0182Q0182 405 nt9.87□□□□□ -0.83
CUP2P15315 SCC4YER147C 1875 nt9.85□□□□□ -0.83
CUP2P15315 SEC11YIR022W 504 nt9.85□□□□□ -0.83
CUP2P15315 ALF1YNL148C 765 nt9.83□□□□□ -0.84
CUP2P15315 IRC15YPL017C 1500 nt9.82□□□□□ -0.84
CUP2P15315 GIS3YLR094C 1509 nt9.76□□□□□ -0.85
CUP2P15315 TRM9YML014W 840 nt9.75□□□□□ -0.85
CUP2P15315 SIS1YNL007C 1059 nt9.75□□□□□ -0.85
CUP2P15315 PIB2YGL023C 1908 nt9.74□□□□□ -0.85
CUP2P15315 CCT6YDR188W 1641 nt9.73□□□□□ -0.85
Retrieved 100 of 7,029 protein–RNA pairs in 10.1 ms