RNA–Protein interactions for RNA: YDR312W

SSF2, Transcript of Protein required for ribosomal large subunit maturation, yeastyeast

Gene SSF2, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSF2YDR312W DBP9Q06218 594 aaKnown RBP2.18□□□□□ -2.06
SSF2YDR312W YDL199CQ12407 687 aa2.18□□□□□ -2.06
SSF2YDR312W FRE6Q12473 712 aa2.18□□□□□ -2.06
SSF2YDR312W TPM1P17536 199 aaKnown RBP2.17□□□□□ -2.06
SSF2YDR312W HMX1P32339 317 aa2.17□□□□□ -2.06
SSF2YDR312W PFS1P38872 237 aa2.17□□□□□ -2.06
SSF2YDR312W TIM17P39515 158 aa2.17□□□□□ -2.06
SSF2YDR312W ATP22P50273 684 aaPredicted RBP2.17□□□□□ -2.06
SSF2YDR312W YGR266WP53326 701 aa2.17□□□□□ -2.06
SSF2YDR312W CWC22P53333 577 aaKnown RBP2.17□□□□□ -2.06
SSF2YDR312W MRPS16Q02608 121 aa2.17□□□□□ -2.06
SSF2YDR312W SKI8Q02793 397 aaPredicted RBP2.17□□□□□ -2.06
SSF2YDR312W YHC1Q05900 231 aaKnown RBP2.17□□□□□ -2.06
SSF2YDR312W PCL9Q12477 304 aa2.17□□□□□ -2.06
SSF2YDR312W COX4P04037 155 aa2.16□□□□□ -2.06
SSF2YDR312W PRB1P09232 635 aa2.16□□□□□ -2.06
SSF2YDR312W PSO2P30620 661 aa2.16□□□□□ -2.06
SSF2YDR312W SPO23P33757 523 aa2.16□□□□□ -2.06
SSF2YDR312W LSM12P38828 187 aaKnown RBP2.16□□□□□ -2.06
SSF2YDR312W LCP5P40079 357 aaPredicted RBP2.16□□□□□ -2.06
SSF2YDR312W LYS12P40495 371 aaKnown RBP2.16□□□□□ -2.06
SSF2YDR312W KEG1P43614 200 aa2.16□□□□□ -2.06
SSF2YDR312W EFM3P47163 339 aa2.16□□□□□ -2.06
SSF2YDR312W LIF1P53150 421 aa2.16□□□□□ -2.06
SSF2YDR312W YMR010WQ03687 405 aa2.16□□□□□ -2.06
SSF2YDR312W SUE1Q06524 206 aa2.16□□□□□ -2.06
SSF2YDR312W DNL4Q08387 944 aaPredicted RBP2.16□□□□□ -2.06
SSF2YDR312W PEX27Q08580 376 aa2.16□□□□□ -2.06
SSF2YDR312W HMS1Q12398 434 aa2.16□□□□□ -2.06
SSF2YDR312W TAL1P15019 335 aaKnown RBP2.15□□□□□ -2.07
SSF2YDR312W DAP2P18962 818 aa2.15□□□□□ -2.07
SSF2YDR312W MSK1P32048 576 aa2.15□□□□□ -2.07
SSF2YDR312W RME1P32338 300 aaKnown RBP2.15□□□□□ -2.07
SSF2YDR312W MID2P36027 376 aa2.15□□□□□ -2.07
SSF2YDR312W SIF2P38262 535 aa2.15□□□□□ -2.07
SSF2YDR312W YHL026CP38740 315 aa2.15□□□□□ -2.07
SSF2YDR312W YHR122WP38829 231 aa2.15□□□□□ -2.07
SSF2YDR312W VPS45P38932 577 aa2.15□□□□□ -2.07
SSF2YDR312W YMR134WP40207 237 aa2.15□□□□□ -2.07
SSF2YDR312W SEC9P40357 651 aa2.15□□□□□ -2.07
SSF2YDR312W PRM1P53835 661 aa2.15□□□□□ -2.07
SSF2YDR312W PGC1Q08959 321 aa2.15□□□□□ -2.07
SSF2YDR312W NFI1Q12216 726 aa2.15□□□□□ -2.07
SSF2YDR312W MCT1Q12283 360 aa2.15□□□□□ -2.07
SSF2YDR312W ECM29P38737 1868 aa2.15□□□□□ -2.07
SSF2YDR312W CCH1P50077 2039 aa2.15□□□□□ -2.07
SSF2YDR312W STE7P06784 515 aa2.14□□□□□ -2.07
SSF2YDR312W ZRC1P20107 442 aa2.14□□□□□ -2.07
SSF2YDR312W CHA1P25379 360 aaKnown RBP2.14□□□□□ -2.07
SSF2YDR312W VAM7P32912 316 aa2.14□□□□□ -2.07
SSF2YDR312W YKR015CP36111 568 aa2.14□□□□□ -2.07
SSF2YDR312W TVP38P36164 337 aa2.14□□□□□ -2.07
SSF2YDR312W GPI18P38211 433 aa2.14□□□□□ -2.07
SSF2YDR312W PES4P39684 611 aa2.14□□□□□ -2.07
SSF2YDR312W HEM14P40012 539 aa2.14□□□□□ -2.07
SSF2YDR312W SNL1P40548 159 aa2.14□□□□□ -2.07
SSF2YDR312W SEC27P41811 889 aaKnown RBP2.14□□□□□ -2.07
SSF2YDR312W YPS5P53057 165 aa2.14□□□□□ -2.07
SSF2YDR312W YGR018CP53211 109 aa2.14□□□□□ -2.07
SSF2YDR312W PDR16P53860 351 aaKnown RBP2.14□□□□□ -2.07
SSF2YDR312W AQR1P53943 586 aa2.14□□□□□ -2.07
SSF2YDR312W REX2P54964 269 aaKnown RBP2.14□□□□□ -2.07
SSF2YDR312W UTP6Q02354 440 aaKnown RBP2.14□□□□□ -2.07
SSF2YDR312W YMR310CQ04867 317 aaPredicted RBP2.14□□□□□ -2.07
SSF2YDR312W SHS1Q07657 551 aa2.14□□□□□ -2.07
SSF2YDR312W GAT3Q07928 141 aa2.14□□□□□ -2.07
SSF2YDR312W YBR056W-AI2HB52 66 aa2.13□□□□□ -2.07
SSF2YDR312W ADH1P00330 348 aaKnown RBP2.13□□□□□ -2.07
SSF2YDR312W MAS1P10507 462 aa2.13□□□□□ -2.07
SSF2YDR312W SCH9P11792 824 aaKnown RBP2.13□□□□□ -2.07
SSF2YDR312W GRR1P24814 1151 aa2.13□□□□□ -2.07
SSF2YDR312W PEX34P25584 144 aa2.13□□□□□ -2.07
SSF2YDR312W DEP1P31385 405 aa2.13□□□□□ -2.07
SSF2YDR312W SMI1P32566 505 aa2.13□□□□□ -2.07
SSF2YDR312W SSE1P32589 693 aaKnown RBP2.13□□□□□ -2.07
SSF2YDR312W BUD2P33314 1104 aa2.13□□□□□ -2.07
SSF2YDR312W ADH5P38113 351 aaKnown RBP2.13□□□□□ -2.07
SSF2YDR312W YHR182WP38870 785 aa2.13□□□□□ -2.07
SSF2YDR312W SEO1P39709 593 aa2.13□□□□□ -2.07
SSF2YDR312W HMF1P40037 129 aaKnown RBP2.13□□□□□ -2.07
SSF2YDR312W IGD1P43598 195 aa2.13□□□□□ -2.07
SSF2YDR312W CIN2P46670 268 aa2.13□□□□□ -2.07
SSF2YDR312W CTK3P46963 296 aaPredicted RBP2.13□□□□□ -2.07
SSF2YDR312W YNL143CP53908 130 aa2.13□□□□□ -2.07
SSF2YDR312W YNL134CP53912 376 aaKnown RBP2.13□□□□□ -2.07
SSF2YDR312W YDR286CQ05530 114 aa2.13□□□□□ -2.07
SSF2YDR312W YOL075CQ08234 1294 aa2.13□□□□□ -2.07
SSF2YDR312W UTP20P35194 2493 aaKnown RBP2.13□□□□□ -2.07
SSF2YDR312W RPS18AP0CX55 146 aaKnown RBP2.12□□□□□ -2.07
SSF2YDR312W RPS18BP0CX56 146 aaPredicted RBP2.12□□□□□ -2.07
SSF2YDR312W DAL5P15365 543 aa2.12□□□□□ -2.07
SSF2YDR312W COQ1P18900 473 aa2.12□□□□□ -2.07
SSF2YDR312W CMK2P22517 447 aa2.12□□□□□ -2.07
SSF2YDR312W MED6P38782 295 aa2.12□□□□□ -2.07
SSF2YDR312W LSB1P53281 241 aa2.12□□□□□ -2.07
SSF2YDR312W MKC7P53379 596 aa2.12□□□□□ -2.07
SSF2YDR312W HST1P53685 503 aa2.12□□□□□ -2.07
SSF2YDR312W RNY1Q02933 434 aaKnown RBP2.12□□□□□ -2.07
SSF2YDR312W ENT5Q03769 411 aaKnown RBP2.12□□□□□ -2.07
SSF2YDR312W CSI1Q04368 295 aa2.12□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 28.5 ms