RNA–Protein interactions for RNA: YAL004W

YAL004W, Transcript of Dubious open reading frame, yeast

Gene YAL004W, Length 648 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YAL004W	YAL004W	CNA1	P23287	553 aa		3.38	□□□□□ -1.87
YAL004W	YAL004W	DPB2	P24482	689 aa	Predicted RBP	3.38	□□□□□ -1.87
YAL004W	YAL004W	PRP18	P33411	251 aa	Predicted RBP	3.38	□□□□□ -1.87
YAL004W	YAL004W	MIA40	P36046	403 aa		3.38	□□□□□ -1.87
YAL004W	YAL004W	RSM22	P36056	628 aa		3.38	□□□□□ -1.87
YAL004W	YAL004W	CBP4	P37267	147 aa		3.38	□□□□□ -1.87
YAL004W	YAL004W	APL3	P38065	1025 aa		3.38	□□□□□ -1.87
YAL004W	YAL004W	HMT1	P38074	348 aa		3.38	□□□□□ -1.87
YAL004W	YAL004W	BIG1	P38813	335 aa		3.38	□□□□□ -1.87
YAL004W	YAL004W	UBA4	P38820	440 aa		3.38	□□□□□ -1.87
YAL004W	YAL004W	TVP23	P38962	199 aa		3.38	□□□□□ -1.87
YAL004W	YAL004W	AVT2	P39981	480 aa		3.38	□□□□□ -1.87
YAL004W	YAL004W	PCL6	P40038	420 aa		3.38	□□□□□ -1.87
YAL004W	YAL004W	YER079W	P40052	210 aa	Known RBP	3.38	□□□□□ -1.87
YAL004W	YAL004W	PEP8	P40335	379 aa		3.38	□□□□□ -1.87
YAL004W	YAL004W	UBC11	P52492	156 aa		3.38	□□□□□ -1.87
YAL004W	YAL004W	YNL092W	P53934	400 aa		3.38	□□□□□ -1.87
YAL004W	YAL004W	DIA1	P54005	336 aa		3.38	□□□□□ -1.87
YAL004W	YAL004W	YMR209C	Q03648	457 aa		3.38	□□□□□ -1.87
YAL004W	YAL004W	TVP15	Q03860	143 aa		3.38	□□□□□ -1.87
YAL004W	YAL004W	YMR087W	Q04299	284 aa		3.38	□□□□□ -1.87
YAL004W	YAL004W	PLM2	Q04383	521 aa		3.38	□□□□□ -1.87
YAL004W	YAL004W	ADH6	Q04894	360 aa	Known RBP	3.38	□□□□□ -1.87
YAL004W	YAL004W	ARO10	Q06408	635 aa		3.38	□□□□□ -1.87
YAL004W	YAL004W	SDO1	Q07953	250 aa	Known RBP	3.38	□□□□□ -1.87
YAL004W	YAL004W	YOL019W	Q08157	551 aa		3.38	□□□□□ -1.87
YAL004W	YAL004W	SNX3	Q08826	162 aa	Known RBP	3.38	□□□□□ -1.87
YAL004W	YAL004W	AIM45	Q12480	344 aa	Known RBP	3.38	□□□□□ -1.87
YAL004W	YAL004W	EFG1	Q3E705	233 aa	Known RBP	3.38	□□□□□ -1.87
YAL004W	YAL004W	YKL033W-A	Q86ZR7	236 aa		3.38	□□□□□ -1.87
YAL004W	YAL004W	FSH3	Q99369	266 aa		3.38	□□□□□ -1.87
YAL004W	YAL004W	ADH2	P00331	348 aa	Known RBP	3.37	□□□□□ -1.87
YAL004W	YAL004W	ATP1	P07251	545 aa	Known RBP	3.37	□□□□□ -1.87
YAL004W	YAL004W	PEP4	P07267	405 aa	Known RBP	3.37	□□□□□ -1.87
YAL004W	YAL004W	MRP1	P10662	321 aa	Known RBP	3.37	□□□□□ -1.87
YAL004W	YAL004W	SLM5	P25345	492 aa	Known RBP	3.37	□□□□□ -1.87
YAL004W	YAL004W	RPS5	P26783	225 aa	Known RBP	3.37	□□□□□ -1.87
YAL004W	YAL004W	ACH1	P32316	526 aa		3.37	□□□□□ -1.87
YAL004W	YAL004W	VMA6	P32366	345 aa	Known RBP	3.37	□□□□□ -1.87
YAL004W	YAL004W	PRP21	P32524	280 aa	Predicted RBP	3.37	□□□□□ -1.87
YAL004W	YAL004W	GDA1	P32621	518 aa		3.37	□□□□□ -1.87
YAL004W	YAL004W	PEX2	P32800	271 aa		3.37	□□□□□ -1.87
YAL004W	YAL004W	AST1	P35183	429 aa		3.37	□□□□□ -1.87
YAL004W	YAL004W	PRS4	P38063	326 aa	Predicted RBP	3.37	□□□□□ -1.87
YAL004W	YAL004W	BNA4	P38169	460 aa		3.37	□□□□□ -1.87
YAL004W	YAL004W	FRT2	P39734	528 aa		3.37	□□□□□ -1.87
YAL004W	YAL004W	POP1	P41812	875 aa		3.37	□□□□□ -1.87
YAL004W	YAL004W	SNG1	P46950	547 aa		3.37	□□□□□ -1.87
YAL004W	YAL004W	YJR011C	P47086	261 aa	Predicted RBP	3.37	□□□□□ -1.87
YAL004W	YAL004W	STB4	P50104	949 aa		3.37	□□□□□ -1.87
YAL004W	YAL004W	LSG1	P53145	640 aa	Known RBP	3.37	□□□□□ -1.87
YAL004W	YAL004W	NMA2	P53204	395 aa		3.37	□□□□□ -1.87
YAL004W	YAL004W	BUD32	P53323	261 aa		3.37	□□□□□ -1.87
YAL004W	YAL004W	SSU72	P53538	206 aa	Predicted RBP	3.37	□□□□□ -1.87
YAL004W	YAL004W	ATG4	P53867	494 aa		3.37	□□□□□ -1.87
YAL004W	YAL004W	DUG3	P53871	357 aa		3.37	□□□□□ -1.87
YAL004W	YAL004W	SAM50	P53969	484 aa		3.37	□□□□□ -1.87
YAL004W	YAL004W	YVH1	Q02256	364 aa	Known RBP	3.37	□□□□□ -1.87
YAL004W	YAL004W	FMP30	Q02883	468 aa		3.37	□□□□□ -1.87
YAL004W	YAL004W	TRS23	Q03784	219 aa		3.37	□□□□□ -1.87
YAL004W	YAL004W	SMP3	Q04174	516 aa		3.37	□□□□□ -1.87
YAL004W	YAL004W	HRD3	Q05787	833 aa		3.37	□□□□□ -1.87
YAL004W	YAL004W	CDC123	Q05791	360 aa		3.37	□□□□□ -1.87
YAL004W	YAL004W	SLD7	Q08457	257 aa		3.37	□□□□□ -1.87
YAL004W	YAL004W	RPS10A	Q08745	105 aa	Predicted RBP	3.37	□□□□□ -1.87
YAL004W	YAL004W	RKI1	Q12189	258 aa		3.37	□□□□□ -1.87
YAL004W	YAL004W	SIA1	Q12212	622 aa		3.37	□□□□□ -1.87
YAL004W	YAL004W	RRI1	Q12468	440 aa		3.37	□□□□□ -1.87
YAL004W	YAL004W	THP2	O13539	261 aa	Known RBP	3.36	□□□□□ -1.87
YAL004W	YAL004W	PAB1	P04147	577 aa	Known RBP RIP-Chip data	3.36	□□□□□ -1.87	not detected
YAL004W	YAL004W	MET3	P08536	511 aa		3.36	□□□□□ -1.87
YAL004W	YAL004W	FBA1	P14540	359 aa	Known RBP	3.36	□□□□□ -1.87
YAL004W	YAL004W	DAL82	P21705	255 aa		3.36	□□□□□ -1.87
YAL004W	YAL004W	PUT3	P25502	979 aa	Predicted RBP	3.36	□□□□□ -1.87
YAL004W	YAL004W	ADE1	P27616	306 aa		3.36	□□□□□ -1.87
YAL004W	YAL004W	ERG9	P29704	444 aa		3.36	□□□□□ -1.87
YAL004W	YAL004W	PHA2	P32452	334 aa		3.36	□□□□□ -1.87
YAL004W	YAL004W	HIS7	P33734	552 aa	Known RBP	3.36	□□□□□ -1.87
YAL004W	YAL004W	SKT5	P34226	696 aa		3.36	□□□□□ -1.87
YAL004W	YAL004W	YPT52	P36018	234 aa	Known RBP	3.36	□□□□□ -1.87
YAL004W	YAL004W	CBT1	P36038	271 aa	Predicted RBP	3.36	□□□□□ -1.87
YAL004W	YAL004W	DRE2	P36152	348 aa		3.36	□□□□□ -1.87
YAL004W	YAL004W	RIB1	P38066	345 aa		3.36	□□□□□ -1.87
YAL004W	YAL004W	YPK3	P38070	525 aa		3.36	□□□□□ -1.87
YAL004W	YAL004W	YPT10	P38146	199 aa		3.36	□□□□□ -1.87
YAL004W	YAL004W	TCM62	P38228	572 aa	Known RBP	3.36	□□□□□ -1.87
YAL004W	YAL004W	YBP1	P38315	674 aa		3.36	□□□□□ -1.87
YAL004W	YAL004W	ATG12	P38316	186 aa		3.36	□□□□□ -1.87
YAL004W	YAL004W	STP2	P38704	541 aa		3.36	□□□□□ -1.87
YAL004W	YAL004W	SEO1	P39709	593 aa		3.36	□□□□□ -1.87
YAL004W	YAL004W	YEL028W	P39989	153 aa		3.36	□□□□□ -1.87
YAL004W	YAL004W	EDC3	P39998	551 aa	Known RBP	3.36	□□□□□ -1.87
YAL004W	YAL004W	BTT1	P40314	149 aa	Predicted RBP	3.36	□□□□□ -1.87
YAL004W	YAL004W	YPS6	P40583	537 aa		3.36	□□□□□ -1.87
YAL004W	YAL004W	CDC1	P40986	491 aa		3.36	□□□□□ -1.87
YAL004W	YAL004W	YFL012W	P43580	148 aa		3.36	□□□□□ -1.87
YAL004W	YAL004W	RPS10B	P46784	105 aa	Known RBP	3.36	□□□□□ -1.87
YAL004W	YAL004W	GUF1	P46943	645 aa		3.36	□□□□□ -1.87
YAL004W	YAL004W	RTT101	P47050	842 aa		3.36	□□□□□ -1.87
YAL004W	YAL004W	VPS25	P47142	202 aa		3.36	□□□□□ -1.87

Retrieved 100 of 5,963 RNA–protein pairs in 25.9 ms