RNA–Protein interactions for RNA: YML031W

NDC1, Transcript of Subunit of the transmembrane ring of the nuclear pore complex (NPC), yeastyeast

Gene NDC1, Length 1,968 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NDC1YML031W SEC3P33332 1336 aaKnown RBP6.98□□□□□ -1.29
NDC1YML031W GRX4P32642 244 aa6.98□□□□□ -1.29
NDC1YML031W HPC2Q01448 625 aa6.98□□□□□ -1.29
NDC1YML031W AAD16Q02895 342 aa6.98□□□□□ -1.29
NDC1YML031W CTT1P06115 562 aa6.97□□□□□ -1.29
NDC1YML031W TAP42Q04372 366 aa6.97□□□□□ -1.29
NDC1YML031W AUS1Q08409 1394 aa6.97□□□□□ -1.29
NDC1YML031W OSM1P21375 501 aaKnown RBP6.97□□□□□ -1.29
NDC1YML031W INP54Q08227 384 aaKnown RBP6.97□□□□□ -1.29
NDC1YML031W MHP1P43638 1398 aa6.96□□□□□ -1.3
NDC1YML031W YER156CP40093 338 aaKnown RBP6.95□□□□□ -1.3
NDC1YML031W RTG3P38165 486 aa6.95□□□□□ -1.3
NDC1YML031W RRT14P40470 206 aa6.95□□□□□ -1.3
NDC1YML031W YKL222CP35995 705 aa6.94□□□□□ -1.3
NDC1YML031W YBP2P53169 641 aa6.93□□□□□ -1.3
NDC1YML031W ERT1P38140 529 aa6.93□□□□□ -1.3
NDC1YML031W SQS1P53866 767 aaKnown RBP6.93□□□□□ -1.3
NDC1YML031W HIM1Q06674 414 aa6.93□□□□□ -1.3
NDC1YML031W RIX7Q07844 837 aaKnown RBP6.92□□□□□ -1.3
NDC1YML031W KIN4Q01919 800 aa6.91□□□□□ -1.3
NDC1YML031W HAA1Q12753 694 aaKnown RBP6.91□□□□□ -1.3
NDC1YML031W CWH41P53008 833 aa6.91□□□□□ -1.3
NDC1YML031W SSA4P22202 642 aaKnown RBP6.9□□□□□ -1.3
NDC1YML031W TOM1Q03280 3268 aa6.9□□□□□ -1.31
NDC1YML031W PEX21P50091 288 aa6.89□□□□□ -1.31
NDC1YML031W TUM1Q08686 304 aaKnown RBP6.89□□□□□ -1.31
NDC1YML031W NUP145P49687 1317 aa6.89□□□□□ -1.31
NDC1YML031W CTF4Q01454 927 aa6.88□□□□□ -1.31
NDC1YML031W KAR2P16474 682 aaKnown RBP6.88□□□□□ -1.31
NDC1YML031W HSP104P31539 908 aaKnown RBP6.88□□□□□ -1.31
NDC1YML031W BUB1P41695 1021 aaKnown RBP RIP-Chip data6.88□□□□□ -1.31not detected
NDC1YML031W DSD1P53095 428 aa6.88□□□□□ -1.31
NDC1YML031W NST1P53935 1240 aa6.88□□□□□ -1.31
NDC1YML031W NYV1Q12255 253 aa6.88□□□□□ -1.31
NDC1YML031W PUS5Q06244 254 aa6.87□□□□□ -1.31
NDC1YML031W FPK1P53739 893 aa6.86□□□□□ -1.31
NDC1YML031W CTI6Q08923 506 aa6.86□□□□□ -1.31
NDC1YML031W PFF1P38244 976 aa6.85□□□□□ -1.31
NDC1YML031W RMT2Q03305 412 aa6.85□□□□□ -1.31
NDC1YML031W BUD27P43573 796 aaKnown RBP RIP-Chip data6.84□□□□□ -1.31not detected
NDC1YML031W TEA1P47988 759 aa6.84□□□□□ -1.31
NDC1YML031W MDG1P53885 366 aa6.84□□□□□ -1.32
NDC1YML031W LPD1P09624 499 aaKnown RBP6.82□□□□□ -1.32
NDC1YML031W SMY1P32364 656 aaKnown RBP6.82□□□□□ -1.32
NDC1YML031W PDS5Q04264 1277 aa6.82□□□□□ -1.32
NDC1YML031W AOS1Q06624 347 aa6.82□□□□□ -1.32
NDC1YML031W RPS9BP05755 195 aaKnown RBP6.82□□□□□ -1.32
NDC1YML031W AKL1P38080 1108 aaKnown RBP6.82□□□□□ -1.32
NDC1YML031W SLI15P38283 698 aa6.82□□□□□ -1.32
NDC1YML031W PAP2P53632 584 aaKnown RBP6.82□□□□□ -1.32
NDC1YML031W NOP53Q12080 455 aaKnown RBP6.82□□□□□ -1.32
NDC1YML031W UTP10P42945 1769 aaKnown RBP6.82□□□□□ -1.32
NDC1YML031W TOP1P04786 769 aa6.8□□□□□ -1.32
NDC1YML031W SER1P33330 395 aaKnown RBP6.8□□□□□ -1.32
NDC1YML031W RAT1Q02792 1006 aaKnown RBP6.8□□□□□ -1.32
NDC1YML031W PHM7Q12252 991 aa6.8□□□□□ -1.32
NDC1YML031W KCC4P25389 1037 aa6.79□□□□□ -1.32
NDC1YML031W YFR016CP43597 1233 aaKnown RBP6.79□□□□□ -1.32
NDC1YML031W ERO1Q03103 563 aa6.79□□□□□ -1.32
NDC1YML031W IRC3Q06683 689 aa6.79□□□□□ -1.32
NDC1YML031W RET1P22276 1149 aaKnown RBP6.78□□□□□ -1.32
NDC1YML031W NSR1P27476 414 aaKnown RBP RIP-Chip data6.78□□□□□ -1.32not detected
NDC1YML031W ICL1P28240 557 aaPredicted RBP6.78□□□□□ -1.32
NDC1YML031W ATG20Q07528 640 aa6.78□□□□□ -1.32
NDC1YML031W ALE1Q08548 619 aa6.78□□□□□ -1.32
NDC1YML031W THS1P04801 734 aaKnown RBP6.78□□□□□ -1.32
NDC1YML031W SHC1P39000 512 aa6.78□□□□□ -1.32
NDC1YML031W BDF2Q07442 638 aa6.78□□□□□ -1.32
NDC1YML031W DIB1Q06819 143 aaPredicted RBP6.77□□□□□ -1.33
NDC1YML031W YGL082WP53155 381 aa6.77□□□□□ -1.33
NDC1YML031W SSP2Q08646 371 aa6.77□□□□□ -1.33
NDC1YML031W RTG2P32608 588 aaKnown RBP6.76□□□□□ -1.33
NDC1YML031W YKU70P32807 602 aa6.76□□□□□ -1.33
NDC1YML031W NTH2P35172 780 aa6.76□□□□□ -1.33
NDC1YML031W PMD1P32634 1753 aa6.76□□□□□ -1.33
NDC1YML031W SIT4P20604 311 aa6.75□□□□□ -1.33
NDC1YML031W YLR278CQ05854 1341 aa6.75□□□□□ -1.33
NDC1YML031W GRX6Q12438 231 aa6.75□□□□□ -1.33
NDC1YML031W FAS2P19097 1887 aaKnown RBP6.74□□□□□ -1.33
NDC1YML031W TRK1P12685 1235 aa6.74□□□□□ -1.33
NDC1YML031W CAF20P12962 161 aaKnown RBP6.74□□□□□ -1.33
NDC1YML031W NOP2P40991 618 aaKnown RBP6.74□□□□□ -1.33
NDC1YML031W UGA3P26370 528 aa6.73□□□□□ -1.33
NDC1YML031W DUS1P53759 423 aaKnown RBP6.73□□□□□ -1.33
NDC1YML031W ETP1P38748 585 aaKnown RBP6.72□□□□□ -1.33
NDC1YML031W POL5P39985 1022 aaKnown RBP6.72□□□□□ -1.33
NDC1YML031W DIP2Q12220 943 aaPredicted RBP6.72□□□□□ -1.33
NDC1YML031W VHR2P40041 505 aa6.71□□□□□ -1.33
NDC1YML031W NSE3Q05541 303 aa6.71□□□□□ -1.33
NDC1YML031W ARG8P18544 423 aa6.71□□□□□ -1.34
NDC1YML031W UBP16Q02863 499 aa6.7□□□□□ -1.34
NDC1YML031W SAS4Q04003 481 aa6.7□□□□□ -1.34
NDC1YML031W DCD1P06773 312 aa6.69□□□□□ -1.34
NDC1YML031W MSM1P22438 575 aa6.69□□□□□ -1.34
NDC1YML031W RPN1P38764 993 aaKnown RBP6.69□□□□□ -1.34
NDC1YML031W SSK22P25390 1331 aaPredicted RBP6.69□□□□□ -1.34
NDC1YML031W POM152P39685 1337 aa6.69□□□□□ -1.34
NDC1YML031W FRD1P32614 470 aaKnown RBP6.69□□□□□ -1.34
NDC1YML031W SYF1Q04048 859 aaPredicted RBP6.69□□□□□ -1.34
NDC1YML031W HAT1Q12341 374 aa6.69□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms