RNA–Protein interactions for RNA: YLR234W

TOP3, Transcript of DNA Topoisomerase III, yeastyeast

Gene TOP3, Length 1,971 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TOP3YLR234W SPT2P06843 333 aaPredicted RBP9.08□□□□□ -0.96
TOP3YLR234W PTP3P40048 928 aa9.08□□□□□ -0.96
TOP3YLR234W KNS1P32350 737 aaPredicted RBP9.08□□□□□ -0.96
TOP3YLR234W PAP2P53632 584 aaKnown RBP9.08□□□□□ -0.96
TOP3YLR234W NMD2P38798 1089 aaKnown RBP9.07□□□□□ -0.96
TOP3YLR234W VPS27P40343 622 aaKnown RBP9.07□□□□□ -0.96
TOP3YLR234W RPO41P13433 1351 aaKnown RBP9.06□□□□□ -0.96
TOP3YLR234W RTR1P40084 226 aaPredicted RBP9.06□□□□□ -0.96
TOP3YLR234W MPP10P47083 593 aaKnown RBP9.06□□□□□ -0.96
TOP3YLR234W SWE1P32944 819 aa9.05□□□□□ -0.96
TOP3YLR234W FKS3Q04952 1785 aa9.05□□□□□ -0.96
TOP3YLR234W PRP5P21372 849 aaPredicted RBP9.04□□□□□ -0.96
TOP3YLR234W PRP45P28004 379 aaPredicted RBP9.04□□□□□ -0.96
TOP3YLR234W URB1P34241 1764 aaKnown RBP9.04□□□□□ -0.96
TOP3YLR234W APC1P53886 1748 aa9.04□□□□□ -0.96
TOP3YLR234W PSH1Q12161 406 aa9.03□□□□□ -0.96
TOP3YLR234W PRD1P25375 712 aa9.02□□□□□ -0.97
TOP3YLR234W CLB5P30283 435 aa9.02□□□□□ -0.97
TOP3YLR234W MSB3P48566 633 aaPredicted RBP9.02□□□□□ -0.97
TOP3YLR234W SUI2P20459 304 aaKnown RBP9.01□□□□□ -0.97
TOP3YLR234W TPM2P40414 161 aa9.01□□□□□ -0.97
TOP3YLR234W BUB1P41695 1021 aaKnown RBP RIP-Chip data9.01□□□□□ -0.97not detected
TOP3YLR234W SLM3Q12093 417 aa9.01□□□□□ -0.97
TOP3YLR234W DSN1P40568 576 aa8.99□□□□□ -0.97
TOP3YLR234W THI22Q06490 572 aa8.99□□□□□ -0.97
TOP3YLR234W AKL1P38080 1108 aaKnown RBP8.99□□□□□ -0.97
TOP3YLR234W YRF1-4O13559 1382 aa8.99□□□□□ -0.97
TOP3YLR234W SAP155P43612 1002 aa8.97□□□□□ -0.97
TOP3YLR234W TEA1P47988 759 aa8.97□□□□□ -0.97
TOP3YLR234W MSH4P40965 878 aaPredicted RBP8.97□□□□□ -0.97
TOP3YLR234W LSP1Q12230 341 aaKnown RBP8.97□□□□□ -0.97
TOP3YLR234W RAD2P07276 1031 aa8.96□□□□□ -0.98
TOP3YLR234W REB1P21538 810 aa8.96□□□□□ -0.98
TOP3YLR234W RPN1P38764 993 aaKnown RBP8.96□□□□□ -0.98
TOP3YLR234W ESC2Q06340 456 aa8.96□□□□□ -0.98
TOP3YLR234W HSP82P02829 709 aaKnown RBP8.95□□□□□ -0.98
TOP3YLR234W TPD3P31383 635 aa8.95□□□□□ -0.98
TOP3YLR234W DSD1P53095 428 aa8.95□□□□□ -0.98
TOP3YLR234W HEF3P53978 1044 aaKnown RBP8.95□□□□□ -0.98
TOP3YLR234W TCB1Q12466 1186 aa8.95□□□□□ -0.98
TOP3YLR234W RTT109Q07794 436 aa8.95□□□□□ -0.98
TOP3YLR234W MSH3P25336 1018 aa8.94□□□□□ -0.98
TOP3YLR234W YNL011CP53980 444 aa8.94□□□□□ -0.98
TOP3YLR234W DOS2P54858 310 aa8.94□□□□□ -0.98
TOP3YLR234W PRP3Q03338 469 aaPredicted RBP8.94□□□□□ -0.98
TOP3YLR234W XKS1P42826 600 aa8.93□□□□□ -0.98
TOP3YLR234W ENT1Q12518 454 aa8.93□□□□□ -0.98
TOP3YLR234W RSF2P46974 1380 aa8.93□□□□□ -0.98
TOP3YLR234W SIC1P38634 284 aa8.93□□□□□ -0.98
TOP3YLR234W NAB6Q03735 1134 aaKnown RBP RIP-Chip data8.93□□□□□ -0.98not detected
TOP3YLR234W CLB1P24868 471 aa8.92□□□□□ -0.98
TOP3YLR234W TCD1P38756 429 aa8.92□□□□□ -0.98
TOP3YLR234W LCD1Q04377 747 aa8.92□□□□□ -0.98
TOP3YLR234W HSP104P31539 908 aaKnown RBP8.92□□□□□ -0.98
TOP3YLR234W APP1P53933 587 aa8.92□□□□□ -0.98
TOP3YLR234W NTH2P35172 780 aa8.91□□□□□ -0.98
TOP3YLR234W MED8P38304 223 aa8.91□□□□□ -0.98
TOP3YLR234W VPS60Q03390 229 aa8.91□□□□□ -0.98
TOP3YLR234W YAH1Q12184 172 aaKnown RBP8.91□□□□□ -0.98
TOP3YLR234W SIR4P11978 1358 aa8.91□□□□□ -0.98
TOP3YLR234W YRF1-3P0CX14 1859 aa8.9□□□□□ -0.98
TOP3YLR234W YRF1-7P0CX15 1859 aa8.9□□□□□ -0.98
TOP3YLR234W YRF1-6P53819 1859 aa8.9□□□□□ -0.98
TOP3YLR234W DEP1P31385 405 aa8.9□□□□□ -0.98
TOP3YLR234W LTV1P34078 463 aa8.9□□□□□ -0.98
TOP3YLR234W CIN4P39110 191 aa8.9□□□□□ -0.98
TOP3YLR234W RSC1P53236 928 aa8.9□□□□□ -0.98
TOP3YLR234W YNL050CP53952 270 aa8.9□□□□□ -0.98
TOP3YLR234W RCR1P38212 213 aa8.9□□□□□ -0.99
TOP3YLR234W ECM1P39715 212 aa8.9□□□□□ -0.99
TOP3YLR234W VPS4P52917 437 aa8.9□□□□□ -0.99
TOP3YLR234W PIL1P53252 339 aaKnown RBP8.9□□□□□ -0.99
TOP3YLR234W HOS3Q02959 697 aaKnown RBP8.9□□□□□ -0.99
TOP3YLR234W ENV9Q08651 330 aa8.9□□□□□ -0.99
TOP3YLR234W SPB4P25808 606 aaPredicted RBP8.89□□□□□ -0.99
TOP3YLR234W MDG1P53885 366 aa8.89□□□□□ -0.99
TOP3YLR234W CTF4Q01454 927 aa8.89□□□□□ -0.99
TOP3YLR234W BMS1Q08965 1183 aaKnown RBP8.89□□□□□ -0.99
TOP3YLR234W PLP2Q12017 286 aa8.89□□□□□ -0.99
TOP3YLR234W ITC1P53125 1264 aa8.88□□□□□ -0.99
TOP3YLR234W COG8Q04632 607 aa8.88□□□□□ -0.99
TOP3YLR234W AOS1Q06624 347 aa8.88□□□□□ -0.99
TOP3YLR234W NOP14Q99207 810 aaKnown RBP8.88□□□□□ -0.99
TOP3YLR234W IES2P40154 320 aa8.86□□□□□ -0.99
TOP3YLR234W NNF2P53253 936 aa8.86□□□□□ -0.99
TOP3YLR234W RNT1Q02555 471 aa8.86□□□□□ -0.99
TOP3YLR234W MCM2P29469 868 aa8.86□□□□□ -0.99
TOP3YLR234W GYP7P48365 746 aa8.86□□□□□ -0.99
TOP3YLR234W ZDS1P50111 915 aaKnown RBP8.86□□□□□ -0.99
TOP3YLR234W ETT1Q08421 412 aaKnown RBP8.86□□□□□ -0.99
TOP3YLR234W MAM1P40065 302 aa8.85□□□□□ -0.99
TOP3YLR234W RRT14P40470 206 aa8.85□□□□□ -0.99
TOP3YLR234W YIL092WP40497 633 aa8.85□□□□□ -0.99
TOP3YLR234W UTP13Q05946 817 aaKnown RBP8.85□□□□□ -0.99
TOP3YLR234W BYE1P36106 594 aa8.84□□□□□ -0.99
TOP3YLR234W INP54Q08227 384 aaKnown RBP8.84□□□□□ -0.99
TOP3YLR234W DAL5P15365 543 aa8.84□□□□□ -0.99
TOP3YLR234W MAK21Q12176 1025 aaKnown RBP8.84□□□□□ -0.99
TOP3YLR234W NUP145P49687 1317 aa8.83□□□□□ -1
TOP3YLR234W IMH1Q06704 911 aaKnown RBP8.83□□□□□ -1
Retrieved 100 of 5,963 RNA–protein pairs in 24.2 ms