RNA–Protein interactions for RNA: YKL014C

URB1, Transcript of Protein required for the normal accumulation of 25S and 5.8S rRNAs, yeast

Gene URB1, Length 5,295 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
URB1	YKL014C	TEL1	P38110	2787 aa		0.07	□□□□□ -2.4
URB1	YKL014C	SCW11	P53189	542 aa		0.07	□□□□□ -2.4
URB1	YKL014C	YPR015C	Q12531	247 aa		0.07	□□□□□ -2.4
URB1	YKL014C	MET5	P47169	1442 aa		0.06	□□□□□ -2.4
URB1	YKL014C	YJR115W	P47152	169 aa		0.06	□□□□□ -2.4
URB1	YKL014C	YCF1	P39109	1515 aa	Known RBP	0.06	□□□□□ -2.4
URB1	YKL014C	INO80	P53115	1489 aa		0.06	□□□□□ -2.4
URB1	YKL014C	CST6	P40535	587 aa		0.06	□□□□□ -2.4
URB1	YKL014C	AI2	P03876	854 aa		0.06	□□□□□ -2.4
URB1	YKL014C	YMR1	P47147	688 aa	Known RBP RIP-Chip data	0.06	□□□□□ -2.4	not detected
URB1	YKL014C	PNS1	Q12412	539 aa		0.06	□□□□□ -2.4
URB1	YKL014C	IQG1	Q12280	1495 aa		0.06	□□□□□ -2.4
URB1	YKL014C	SDH2	P21801	266 aa		0.06	□□□□□ -2.4
URB1	YKL014C	STU1	P38198	1513 aa		0.05	□□□□□ -2.4
URB1	YKL014C	MPC54	Q08550	464 aa		0.05	□□□□□ -2.4
URB1	YKL014C	POL1	P13382	1468 aa		0.05	□□□□□ -2.4
URB1	YKL014C	TYW1	Q08960	810 aa	Known RBP	0.05	□□□□□ -2.4
URB1	YKL014C	VPS15	P22219	1454 aa		0.05	□□□□□ -2.4
URB1	YKL014C	DPH6	Q12429	685 aa		0.05	□□□□□ -2.4
URB1	YKL014C	MRM1	P25270	412 aa		0.05	□□□□□ -2.4
URB1	YKL014C	FLO1	P32768	1537 aa		0.04	□□□□□ -2.4
URB1	YKL014C	OPT2	Q06593	877 aa		0.04	□□□□□ -2.4
URB1	YKL014C	GRE2	Q12068	342 aa	Known RBP	0.04	□□□□□ -2.4
URB1	YKL014C	MDS3	P53094	1487 aa		0.04	□□□□□ -2.4
URB1	YKL014C	SPT16	P32558	1035 aa	Known RBP	0.04	□□□□□ -2.4
URB1	YKL014C	SNM1	P40993	198 aa		0.04	□□□□□ -2.4
URB1	YKL014C	YPK9	Q12697	1472 aa		0.04	□□□□□ -2.4
URB1	YKL014C	TRM3	Q07527	1436 aa		0.03	□□□□□ -2.4
URB1	YKL014C	YPT53	P36019	220 aa		0.03	□□□□□ -2.4
URB1	YKL014C	ATH1	P48016	1211 aa		0.03	□□□□□ -2.4
URB1	YKL014C	YNR014W	P53719	212 aa		0.03	□□□□□ -2.4
URB1	YKL014C	MIP1	P15801	1254 aa		0.03	□□□□□ -2.4
URB1	YKL014C	VTH1	P40438	1549 aa		0.03	□□□□□ -2.41
URB1	YKL014C	VTH2	P40890	1549 aa		0.03	□□□□□ -2.41
URB1	YKL014C	HED1	Q03937	162 aa		0.02	□□□□□ -2.41
URB1	YKL014C	BCK1	Q01389	1478 aa		0.02	□□□□□ -2.41
URB1	YKL014C	LAM6	Q08001	693 aa		0.02	□□□□□ -2.41
URB1	YKL014C	AFT1	P22149	690 aa		0.02	□□□□□ -2.41
URB1	YKL014C	UGA3	P26370	528 aa		0.02	□□□□□ -2.41
URB1	YKL014C	TAT1	P38085	619 aa		0.02	□□□□□ -2.41
URB1	YKL014C	SEC7	P11075	2009 aa	Known RBP	0.02	□□□□□ -2.41
URB1	YKL014C	PRT1	P06103	763 aa	Known RBP	0.01	□□□□□ -2.41
URB1	YKL014C	SNT2	P53127	1403 aa		0.01	□□□□□ -2.41
URB1	YKL014C	LIP5	P32875	414 aa		0.01	□□□□□ -2.41
URB1	YKL014C	LYS5	P50113	272 aa		0.01	□□□□□ -2.41
URB1	YKL014C	DPL1	Q05567	589 aa		0.01	□□□□□ -2.41
URB1	YKL014C	STT4	P37297	1900 aa		0.01	□□□□□ -2.41
URB1	YKL014C	GEA2	P39993	1459 aa	Known RBP	0.01	□□□□□ -2.41
URB1	YKL014C	SNQ2	P32568	1501 aa	Known RBP	0.01	□□□□□ -2.41
URB1	YKL014C	TDA6	Q06466	467 aa		0.01	□□□□□ -2.41
URB1	YKL014C	ISU2	Q12056	156 aa		0.01	□□□□□ -2.41
URB1	YKL014C	DIP2	Q12220	943 aa	Predicted RBP	0.01	□□□□□ -2.41
URB1	YKL014C	TOP2	P06786	1428 aa	Known RBP	0.01	□□□□□ -2.41
URB1	YKL014C	PAN1	P32521	1480 aa		0.01	□□□□□ -2.41
URB1	YKL014C	PDR1	P12383	1068 aa		0	□□□□□ -2.41
URB1	YKL014C	LSB6	P42951	607 aa		0	□□□□□ -2.41
URB1	YKL014C	MOT1	P32333	1867 aa		0	□□□□□ -2.41
URB1	YKL014C	GLY1	P37303	387 aa	Known RBP	0	□□□□□ -2.41
URB1	YKL014C	RSM7	P47150	247 aa		0	□□□□□ -2.41
URB1	YKL014C	SCC2	Q04002	1493 aa		-0	□□□□□ -2.41
URB1	YKL014C	CAT8	P39113	1433 aa		-0	□□□□□ -2.41
URB1	YKL014C	PAT1	P25644	796 aa	Known RBP	-0	□□□□□ -2.41
URB1	YKL014C	UBP5	P39944	805 aa		-0	□□□□□ -2.41
URB1	YKL014C	AMN1	P38285	549 aa	Predicted RBP	-0	□□□□□ -2.41
URB1	YKL014C	STS1	P38637	319 aa		-0	□□□□□ -2.41
URB1	YKL014C	NUP159	P40477	1460 aa		-0.01	□□□□□ -2.41
URB1	YKL014C	RIF1	P29539	1916 aa		-0.01	□□□□□ -2.41
URB1	YKL014C	BDP1	P46678	594 aa		-0.01	□□□□□ -2.41
URB1	YKL014C	GCD11	P32481	527 aa	Known RBP	-0.01	□□□□□ -2.41
URB1	YKL014C	TAD3	Q9URQ3	322 aa		-0.01	□□□□□ -2.41
URB1	YKL014C	MLP1	Q02455	1875 aa	Known RBP	-0.01	□□□□□ -2.41
URB1	YKL014C	NPL4	P33755	580 aa		-0.01	□□□□□ -2.41
URB1	YKL014C	YAH1	Q12184	172 aa	Known RBP	-0.01	□□□□□ -2.41
URB1	YKL014C	UFD4	P33202	1483 aa		-0.01	□□□□□ -2.41
URB1	YKL014C	MYO1	P08964	1928 aa		-0.01	□□□□□ -2.41
URB1	YKL014C	LTE1	P07866	1435 aa		-0.01	□□□□□ -2.41
URB1	YKL014C	AOS1	Q06624	347 aa		-0.01	□□□□□ -2.41
URB1	YKL014C	MET32	Q12041	191 aa		-0.01	□□□□□ -2.41
URB1	YKL014C	MYO4	P32492	1471 aa		-0.01	□□□□□ -2.41
URB1	YKL014C	MCA1	Q08601	432 aa		-0.02	□□□□□ -2.41
URB1	YKL014C	YOR1	P53049	1477 aa		-0.02	□□□□□ -2.41
URB1	YKL014C	SSN2	P38931	1420 aa		-0.02	□□□□□ -2.41
URB1	YKL014C	SBE2	P42223	864 aa	Known RBP	-0.02	□□□□□ -2.41
URB1	YKL014C	PTK2	P47116	818 aa	Known RBP	-0.02	□□□□□ -2.41
URB1	YKL014C	UBP2	Q01476	1272 aa		-0.03	□□□□□ -2.41
URB1	YKL014C	RAM1	P22007	431 aa		-0.03	□□□□□ -2.41
URB1	YKL014C	NAB2	P32505	525 aa	Known RBP RIP-Chip data	-0.03	□□□□□ -2.41	not detected
URB1	YKL014C	YFL066C	P43538	392 aa		-0.03	□□□□□ -2.41
URB1	YKL014C	SAF1	P38352	637 aa		-0.04	□□□□□ -2.42
URB1	YKL014C	SKN7	P38889	622 aa		-0.04	□□□□□ -2.42
URB1	YKL014C	SPT6	P23615	1451 aa	Known RBP	-0.04	□□□□□ -2.42
URB1	YKL014C	BOI2	P39969	1040 aa		-0.04	□□□□□ -2.42
URB1	YKL014C	MIF2	P35201	549 aa		-0.05	□□□□□ -2.42
URB1	YKL014C	ROG3	P43602	733 aa		-0.05	□□□□□ -2.42
URB1	YKL014C	NUP85	P46673	744 aa		-0.05	□□□□□ -2.42
URB1	YKL014C	PUS5	Q06244	254 aa		-0.05	□□□□□ -2.42
URB1	YKL014C	SLN1	P39928	1220 aa	Predicted RBP	-0.05	□□□□□ -2.42
URB1	YKL014C	LSC2	P53312	427 aa		-0.05	□□□□□ -2.42
URB1	YKL014C	TY1A-BL	Q12266	440 aa		-0.05	□□□□□ -2.42
URB1	YKL014C	GUT1	P32190	709 aa		-0.05	□□□□□ -2.42

Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms