RNA–Protein interactions for RNA: YDR353W

TRR1, Transcript of Cytoplasmic thioredoxin reductase, yeastyeast

Gene TRR1, Length 960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRR1YDR353W MPH3P0CE00 602 aa8.47□□□□□ -1.05
TRR1YDR353W SPC110P32380 944 aa8.47□□□□□ -1.05
TRR1YDR353W SLN1P39928 1220 aaPredicted RBP8.47□□□□□ -1.05
TRR1YDR353W SPT2P06843 333 aaPredicted RBP8.45□□□□□ -1.06
TRR1YDR353W NAP1P25293 417 aaKnown RBP8.45□□□□□ -1.06
TRR1YDR353W NMD2P38798 1089 aaKnown RBP8.45□□□□□ -1.06
TRR1YDR353W PLP2Q12017 286 aa8.44□□□□□ -1.06
TRR1YDR353W TY3B-IQ7LHG5 1498 aaKnown RBP8.44□□□□□ -1.06
TRR1YDR353W NOT3P06102 836 aaKnown RBP8.43□□□□□ -1.06
TRR1YDR353W UBP14P38237 781 aaKnown RBP8.43□□□□□ -1.06
TRR1YDR353W CTR9P89105 1077 aa8.43□□□□□ -1.06
TRR1YDR353W LTE1P07866 1435 aa8.43□□□□□ -1.06
TRR1YDR353W VHR2P40041 505 aa8.42□□□□□ -1.06
TRR1YDR353W YLR326WQ06170 240 aaKnown RBP8.42□□□□□ -1.06
TRR1YDR353W MAK21Q12176 1025 aaKnown RBP8.42□□□□□ -1.06
TRR1YDR353W AIR2Q12476 344 aaKnown RBP8.42□□□□□ -1.06
TRR1YDR353W DOP1Q03921 1698 aa8.41□□□□□ -1.06
TRR1YDR353W VMR1P38735 1592 aa8.41□□□□□ -1.06
TRR1YDR353W BNR1P40450 1375 aa8.41□□□□□ -1.06
TRR1YDR353W KEX1P09620 729 aa8.41□□□□□ -1.06
TRR1YDR353W ILV3P39522 585 aaKnown RBP8.41□□□□□ -1.06
TRR1YDR353W NCR1Q12200 1170 aa8.41□□□□□ -1.06
TRR1YDR353W PBS2P08018 668 aa8.39□□□□□ -1.07
TRR1YDR353W TFG1P41895 735 aaPredicted RBP8.39□□□□□ -1.07
TRR1YDR353W NUP188P52593 1655 aaKnown RBP8.39□□□□□ -1.07
TRR1YDR353W BNI1P41832 1953 aa8.39□□□□□ -1.07
TRR1YDR353W RAV1P47104 1357 aa8.38□□□□□ -1.07
TRR1YDR353W VPS24P36095 224 aaKnown RBP8.38□□□□□ -1.07
TRR1YDR353W YPP1P46951 817 aa8.37□□□□□ -1.07
TRR1YDR353W YDR090CQ03193 310 aa8.37□□□□□ -1.07
TRR1YDR353W PCT1P13259 424 aa8.36□□□□□ -1.07
TRR1YDR353W RAD54P32863 898 aa8.36□□□□□ -1.07
TRR1YDR353W DSF2P38213 736 aa8.36□□□□□ -1.07
TRR1YDR353W RAD26P40352 1085 aa8.36□□□□□ -1.07
TRR1YDR353W PIL1P53252 339 aaKnown RBP8.36□□□□□ -1.07
TRR1YDR353W TRM3Q07527 1436 aa8.36□□□□□ -1.07
TRR1YDR353W COX6P00427 148 aa8.35□□□□□ -1.07
TRR1YDR353W DJP1P40564 432 aa8.35□□□□□ -1.07
TRR1YDR353W MSH4P40965 878 aaPredicted RBP8.35□□□□□ -1.07
TRR1YDR353W CDC45Q08032 650 aa8.35□□□□□ -1.07
TRR1YDR353W RTC1Q08281 1341 aa8.34□□□□□ -1.07
TRR1YDR353W RPP0P05317 312 aaKnown RBP8.34□□□□□ -1.07
TRR1YDR353W SPB4P25808 606 aaPredicted RBP8.34□□□□□ -1.07
TRR1YDR353W MSP1P28737 362 aa8.34□□□□□ -1.07
TRR1YDR353W YDL129WQ07555 291 aa8.34□□□□□ -1.07
TRR1YDR353W PSH1Q12161 406 aa8.34□□□□□ -1.07
TRR1YDR353W PDR11P40550 1411 aa8.34□□□□□ -1.07
TRR1YDR353W NUP192P47054 1683 aa8.34□□□□□ -1.08
TRR1YDR353W PCS60P38137 543 aaKnown RBP RIP-Chip data8.33□□□□□ -1.08not detected
TRR1YDR353W KIC1P38692 1080 aa8.33□□□□□ -1.08
TRR1YDR353W IML1P47170 1584 aa8.33□□□□□ -1.08
TRR1YDR353W YNL011CP53980 444 aa8.33□□□□□ -1.08
TRR1YDR353W PML39Q03760 334 aa8.33□□□□□ -1.08
TRR1YDR353W ARL1P38116 183 aaKnown RBP8.31□□□□□ -1.08
TRR1YDR353W SLI15P38283 698 aa8.31□□□□□ -1.08
TRR1YDR353W RPN1P38764 993 aaKnown RBP8.31□□□□□ -1.08
TRR1YDR353W DNF2Q12675 1612 aa8.3□□□□□ -1.08
TRR1YDR353W YJL171CP46992 396 aa8.3□□□□□ -1.08
TRR1YDR353W TCD1P38756 429 aa8.29□□□□□ -1.08
TRR1YDR353W CHZ1P40019 153 aaPredicted RBP8.29□□□□□ -1.08
TRR1YDR353W VPS27P40343 622 aaKnown RBP8.29□□□□□ -1.08
TRR1YDR353W TPM2P40414 161 aa8.29□□□□□ -1.08
TRR1YDR353W DSN1P40568 576 aa8.29□□□□□ -1.08
TRR1YDR353W VPS4P52917 437 aa8.29□□□□□ -1.08
TRR1YDR353W PRP3Q03338 469 aaPredicted RBP8.29□□□□□ -1.08
TRR1YDR353W ITT1Q04638 464 aa8.29□□□□□ -1.08
TRR1YDR353W LSP1Q12230 341 aaKnown RBP8.29□□□□□ -1.08
TRR1YDR353W BMT6Q12291 365 aa8.29□□□□□ -1.08
TRR1YDR353W MAM3Q12296 706 aa8.29□□□□□ -1.08
TRR1YDR353W DRS2P39524 1355 aa8.28□□□□□ -1.08
TRR1YDR353W ESC2Q06340 456 aa8.28□□□□□ -1.08
TRR1YDR353W MLP1Q02455 1875 aaKnown RBP8.27□□□□□ -1.09
TRR1YDR353W SAP30P38429 201 aa8.26□□□□□ -1.09
TRR1YDR353W MID1P41821 548 aa8.26□□□□□ -1.09
TRR1YDR353W RPP1BP10622 106 aaKnown RBP8.25□□□□□ -1.09
TRR1YDR353W BYE1P36106 594 aa8.25□□□□□ -1.09
TRR1YDR353W TAN1P53072 289 aaPredicted RBP8.25□□□□□ -1.09
TRR1YDR353W NNF2P53253 936 aa8.25□□□□□ -1.09
TRR1YDR353W RNT1Q02555 471 aa8.25□□□□□ -1.09
TRR1YDR353W KNS1P32350 737 aaPredicted RBP8.24□□□□□ -1.09
TRR1YDR353W LTV1P34078 463 aa8.24□□□□□ -1.09
TRR1YDR353W KIP3P53086 805 aaKnown RBP8.24□□□□□ -1.09
TRR1YDR353W ORC1P54784 914 aaPredicted RBP8.24□□□□□ -1.09
TRR1YDR353W MSH3P25336 1018 aa8.23□□□□□ -1.09
TRR1YDR353W ESL2P36168 1195 aa8.23□□□□□ -1.09
TRR1YDR353W IES2P40154 320 aa8.23□□□□□ -1.09
TRR1YDR353W PEX29Q03370 554 aa8.23□□□□□ -1.09
TRR1YDR353W VPS60Q03390 229 aa8.23□□□□□ -1.09
TRR1YDR353W PDS5Q04264 1277 aa8.23□□□□□ -1.09
TRR1YDR353W RAD9P14737 1309 aa8.23□□□□□ -1.09
TRR1YDR353W CBF5P33322 483 aaKnown RBP RIP-Chip data8.22□□□□□ -1.09not detected
TRR1YDR353W TAF5P38129 798 aa8.22□□□□□ -1.09
TRR1YDR353W SIC1P38634 284 aa8.22□□□□□ -1.09
TRR1YDR353W DOS2P54858 310 aa8.22□□□□□ -1.09
TRR1YDR353W RVB2Q12464 471 aaKnown RBP8.22□□□□□ -1.09
TRR1YDR353W SRP54P20424 541 aaKnown RBP8.21□□□□□ -1.1
TRR1YDR353W CLB5P30283 435 aa8.21□□□□□ -1.1
TRR1YDR353W MPC54Q08550 464 aa8.21□□□□□ -1.1
TRR1YDR353W RAD2P07276 1031 aa8.2□□□□□ -1.1
TRR1YDR353W CLB1P24868 471 aa8.2□□□□□ -1.1
Retrieved 100 of 5,963 RNA–protein pairs in 52.6 ms