RNA–Protein interactions for RNA: YBL006C

LDB7, Transcript of Component of the RSC chromatin remodeling complex, yeastyeast

Gene LDB7, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB7YBL006C RAD4P14736 754 aa9.21□□□□□ -0.94
LDB7YBL006C BUG1Q12191 341 aa9.2□□□□□ -0.94
LDB7YBL006C MHP1P43638 1398 aa9.2□□□□□ -0.94
LDB7YBL006C OSM1P21375 501 aaKnown RBP9.19□□□□□ -0.94
LDB7YBL006C TOS1P38288 455 aa9.19□□□□□ -0.94
LDB7YBL006C GRE2Q12068 342 aaKnown RBP9.19□□□□□ -0.94
LDB7YBL006C GRX1P25373 110 aaKnown RBP9.17□□□□□ -0.94
LDB7YBL006C EAF6P47128 113 aa9.17□□□□□ -0.94
LDB7YBL006C UTP22P53254 1237 aaPredicted RBP9.17□□□□□ -0.94
LDB7YBL006C TSR3Q12094 313 aaKnown RBP9.16□□□□□ -0.94
LDB7YBL006C UTP10P42945 1769 aaKnown RBP9.16□□□□□ -0.94
LDB7YBL006C NUP145P49687 1317 aa9.15□□□□□ -0.94
LDB7YBL006C PDS5Q04264 1277 aa9.14□□□□□ -0.95
LDB7YBL006C KAR2P16474 682 aaKnown RBP9.13□□□□□ -0.95
LDB7YBL006C BUB1P41695 1021 aaKnown RBP RIP-Chip data9.13□□□□□ -0.95not detected
LDB7YBL006C SAP155P43612 1002 aa9.12□□□□□ -0.95
LDB7YBL006C DSD1P53095 428 aa9.12□□□□□ -0.95
LDB7YBL006C YBP2P53169 641 aa9.12□□□□□ -0.95
LDB7YBL006C MSN5P52918 1224 aa9.11□□□□□ -0.95
LDB7YBL006C RIX7Q07844 837 aaKnown RBP9.11□□□□□ -0.95
LDB7YBL006C TUM1Q08686 304 aaKnown RBP9.11□□□□□ -0.95
LDB7YBL006C TOM1Q03280 3268 aa9.1□□□□□ -0.95
LDB7YBL006C HSP104P31539 908 aaKnown RBP9.1□□□□□ -0.95
LDB7YBL006C HPC2Q01448 625 aa9.1□□□□□ -0.95
LDB7YBL006C CTF4Q01454 927 aa9.09□□□□□ -0.95
LDB7YBL006C AKL1P38080 1108 aaKnown RBP9.07□□□□□ -0.96
LDB7YBL006C ERT1P38140 529 aa9.07□□□□□ -0.96
LDB7YBL006C YER156CP40093 338 aaKnown RBP9.07□□□□□ -0.96
LDB7YBL006C CTT1P06115 562 aa9.06□□□□□ -0.96
LDB7YBL006C TRK1P12685 1235 aa9.06□□□□□ -0.96
LDB7YBL006C POL5P39985 1022 aaKnown RBP9.06□□□□□ -0.96
LDB7YBL006C NST1P53935 1240 aa9.06□□□□□ -0.96
LDB7YBL006C KIN4Q01919 800 aa9.06□□□□□ -0.96
LDB7YBL006C NYV1Q12255 253 aa9.05□□□□□ -0.96
LDB7YBL006C YKL222CP35995 705 aa9.04□□□□□ -0.96
LDB7YBL006C PAP2P53632 584 aaKnown RBP9.04□□□□□ -0.96
LDB7YBL006C RMT2Q03305 412 aa9.03□□□□□ -0.96
LDB7YBL006C RRT14P40470 206 aa9.02□□□□□ -0.97
LDB7YBL006C TEA1P47988 759 aa9.02□□□□□ -0.97
LDB7YBL006C CWH41P53008 833 aa9.02□□□□□ -0.97
LDB7YBL006C AOS1Q06624 347 aa9.02□□□□□ -0.97
LDB7YBL006C PMD1P32634 1753 aa9.01□□□□□ -0.97
LDB7YBL006C KCC4P25389 1037 aa9□□□□□ -0.97
LDB7YBL006C RRD1P40454 393 aaKnown RBP9□□□□□ -0.97
LDB7YBL006C BUD27P43573 796 aaKnown RBP RIP-Chip data9□□□□□ -0.97not detected
LDB7YBL006C SQS1P53866 767 aaKnown RBP9□□□□□ -0.97
LDB7YBL006C ALE1Q08548 619 aa9□□□□□ -0.97
LDB7YBL006C NTH2P35172 780 aa8.99□□□□□ -0.97
LDB7YBL006C CTI6Q08923 506 aa8.99□□□□□ -0.97
LDB7YBL006C NOP53Q12080 455 aaKnown RBP8.99□□□□□ -0.97
LDB7YBL006C PFF1P38244 976 aa8.98□□□□□ -0.97
LDB7YBL006C RRP46P53256 223 aaPredicted RBP8.98□□□□□ -0.97
LDB7YBL006C MDG1P53885 366 aa8.98□□□□□ -0.97
LDB7YBL006C PHM7Q12252 991 aa8.98□□□□□ -0.97
LDB7YBL006C SMY1P32364 656 aaKnown RBP8.97□□□□□ -0.97
LDB7YBL006C DIP2Q12220 943 aaPredicted RBP8.96□□□□□ -0.98
LDB7YBL006C LPD1P09624 499 aaKnown RBP8.95□□□□□ -0.98
LDB7YBL006C SSA4P22202 642 aaKnown RBP8.95□□□□□ -0.98
LDB7YBL006C SER1P33330 395 aaKnown RBP8.94□□□□□ -0.98
LDB7YBL006C YFR016CP43597 1233 aaKnown RBP8.94□□□□□ -0.98
LDB7YBL006C YGL082WP53155 381 aa8.93□□□□□ -0.98
LDB7YBL006C FPK1P53739 893 aa8.93□□□□□ -0.98
LDB7YBL006C RAT1Q02792 1006 aaKnown RBP8.93□□□□□ -0.98
LDB7YBL006C SSP2Q08646 371 aa8.93□□□□□ -0.98
LDB7YBL006C LYS2P07702 1392 aa8.92□□□□□ -0.98
LDB7YBL006C UGA3P26370 528 aa8.92□□□□□ -0.98
LDB7YBL006C ERO1Q03103 563 aa8.92□□□□□ -0.98
LDB7YBL006C ARG8P18544 423 aa8.91□□□□□ -0.98
LDB7YBL006C BDF2Q07442 638 aa8.91□□□□□ -0.98
LDB7YBL006C FIG2P25653 1609 aa8.91□□□□□ -0.98
LDB7YBL006C FAS2P19097 1887 aaKnown RBP8.9□□□□□ -0.98
LDB7YBL006C PEX21P50091 288 aa8.9□□□□□ -0.98
LDB7YBL006C YNL050CP53952 270 aa8.9□□□□□ -0.98
LDB7YBL006C PUS5Q06244 254 aa8.9□□□□□ -0.98
LDB7YBL006C DCD1P06773 312 aa8.89□□□□□ -0.99
LDB7YBL006C PSD2P53037 1138 aaKnown RBP8.89□□□□□ -0.99
LDB7YBL006C IRC3Q06683 689 aa8.89□□□□□ -0.99
LDB7YBL006C TOP1P04786 769 aa8.88□□□□□ -0.99
LDB7YBL006C HKR1P41809 1802 aa8.88□□□□□ -0.99
LDB7YBL006C CAF20P12962 161 aaKnown RBP8.87□□□□□ -0.99
LDB7YBL006C ICL1P28240 557 aaPredicted RBP8.87□□□□□ -0.99
LDB7YBL006C NSE3Q05541 303 aa8.87□□□□□ -0.99
LDB7YBL006C DIB1Q06819 143 aaPredicted RBP8.87□□□□□ -0.99
LDB7YBL006C YPR204WQ08995 1032 aa8.87□□□□□ -0.99
LDB7YBL006C RPS9BP05755 195 aaKnown RBP8.86□□□□□ -0.99
LDB7YBL006C SLI15P38283 698 aa8.86□□□□□ -0.99
LDB7YBL006C SHC1P39000 512 aa8.86□□□□□ -0.99
LDB7YBL006C SSK22P25390 1331 aaPredicted RBP8.85□□□□□ -0.99
LDB7YBL006C YLR278CQ05854 1341 aa8.85□□□□□ -0.99
LDB7YBL006C SIT4P20604 311 aa8.85□□□□□ -0.99
LDB7YBL006C PRD1P25375 712 aa8.85□□□□□ -0.99
LDB7YBL006C APL2P36000 726 aaPredicted RBP8.85□□□□□ -0.99
LDB7YBL006C RTR1P40084 226 aaPredicted RBP8.85□□□□□ -0.99
LDB7YBL006C UBP16Q02863 499 aa8.85□□□□□ -0.99
LDB7YBL006C ATG20Q07528 640 aa8.85□□□□□ -0.99
LDB7YBL006C THS1P04801 734 aaKnown RBP8.84□□□□□ -0.99
LDB7YBL006C RET1P22276 1149 aaKnown RBP8.83□□□□□ -1
LDB7YBL006C YKU70P32807 602 aa8.83□□□□□ -1
LDB7YBL006C IOC4Q04213 475 aa8.83□□□□□ -1
LDB7YBL006C GRX6Q12438 231 aa8.83□□□□□ -1
Retrieved 100 of 5,963 RNA–protein pairs in 52.2 ms