RNA–Protein interactions for RNA: ENST00000637158.1

CTSD-209, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 1,200 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-209ENST00000637158 TSPY10P0CW01 314 aa29.04■■■□□ 2.24
CTSD-209ENST00000637158 CAMSAP2Q08AD1 1489 aa29.03■■■□□ 2.24
CTSD-209ENST00000637158 WASHC2CQ9Y4E1 1318 aa29.01■■■□□ 2.23
CTSD-209ENST00000637158 TNRQ92752 1358 aa28.99■■■□□ 2.23
CTSD-209ENST00000637158 KDM5DQ9BY66 1539 aa28.98■■■□□ 2.23
CTSD-209ENST00000637158 PZPP20742 1482 aa28.97■■■□□ 2.23
CTSD-209ENST00000637158 DNMT1P26358 1616 aaKnown RBP28.96■■■□□ 2.23
CTSD-209ENST00000637158 UBAP1LF5GYI3 381 aa28.96■■■□□ 2.23
CTSD-209ENST00000637158 FBXO31Q5XUX0 539 aaPredicted RBP28.95■■■□□ 2.22
CTSD-209ENST00000637158 ARHGEF5Q12774 1597 aa28.95■■■□□ 2.22
CTSD-209ENST00000637158 THEMISQ8N1K5 641 aaPredicted RBP28.92■■■□□ 2.22
CTSD-209ENST00000637158 VPS8Q8N3P4 1428 aa28.91■■■□□ 2.22
CTSD-209ENST00000637158 LRRC9Q6ZRR7 1453 aa28.9■■■□□ 2.22
CTSD-209ENST00000637158 MIA2Q96PC5 1412 aa28.89■■■□□ 2.22
CTSD-209ENST00000637158 ILDR2Q71H61 639 aa28.89■■■□□ 2.22
CTSD-209ENST00000637158 ANKLE2Q86XL3 938 aa28.89■■■□□ 2.22
CTSD-209ENST00000637158 NLRP1Q9C000 1473 aa28.88■■■□□ 2.21
CTSD-209ENST00000637158 SPATA31D1Q6ZQQ2 1576 aa28.88■■■□□ 2.21
CTSD-209ENST00000637158 SOCS7O14512 581 aa28.86■■■□□ 2.21
CTSD-209ENST00000637158 MAP3K1Q13233 1512 aa28.83■■■□□ 2.21
CTSD-209ENST00000637158 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.82■■■□□ 2.2
CTSD-209ENST00000637158 CPS1P31327 1500 aa28.82■■■□□ 2.2
CTSD-209ENST00000637158 POLR1AO95602 1720 aaPredicted RBP28.82■■■□□ 2.2
CTSD-209ENST00000637158 MAST1Q9Y2H9 1570 aa28.81■■■□□ 2.2
CTSD-209ENST00000637158 UGGT1Q9NYU2 1555 aa28.8■■■□□ 2.2
CTSD-209ENST00000637158 TOM1O60784 492 aa28.79■■■□□ 2.2
CTSD-209ENST00000637158 NEURL4Q96JN8 1562 aa28.79■■■□□ 2.2
CTSD-209ENST00000637158 SHANK2Q9UPX8 1470 aa28.78■■■□□ 2.2
CTSD-209ENST00000637158 LOC105371045A0A1W2PR82 267 aa28.78■■■□□ 2.2
CTSD-209ENST00000637158 RNF17Q9BXT8 1623 aaKnown RBP28.76■■■□□ 2.2
CTSD-209ENST00000637158 KANK4Q5T7N3 995 aaPredicted RBP28.76■■■□□ 2.19
CTSD-209ENST00000637158 MYOM3Q5VTT5 1437 aa28.76■■■□□ 2.19
CTSD-209ENST00000637158 ZC3H13Q5T200 1668 aaKnown RBP28.75■■■□□ 2.19
CTSD-209ENST00000637158 MED14O60244 1454 aa28.75■■■□□ 2.19
CTSD-209ENST00000637158 EIF2AK4Q9P2K8 1649 aaKnown RBP28.74■■■□□ 2.19
CTSD-209ENST00000637158 ABCC3O15438 1527 aa28.74■■■□□ 2.19
CTSD-209ENST00000637158 NPHP4O75161 1426 aaPredicted RBP28.73■■■□□ 2.19
CTSD-209ENST00000637158 DEPDC5O75140 1603 aa28.72■■■□□ 2.19
CTSD-209ENST00000637158 SCAF1Q9H7N4 1312 aaKnown RBP28.69■■■□□ 2.18
CTSD-209ENST00000637158 DUOX2Q9NRD8 1548 aa28.69■■■□□ 2.18
CTSD-209ENST00000637158 PIP4K2BP78356 416 aa28.68■■■□□ 2.18
CTSD-209ENST00000637158 APLP2Q06481 763 aa28.67■■■□□ 2.18
CTSD-209ENST00000637158 ERVK-7P63135 1459 aa28.66■■■□□ 2.18
CTSD-209ENST00000637158 VWDEQ8N2E2 1590 aa28.66■■■□□ 2.18
CTSD-209ENST00000637158 HSPA1LP34931 641 aa28.63■■■□□ 2.17
CTSD-209ENST00000637158 IQGAP1P46940 1657 aa28.61■■■□□ 2.17
CTSD-209ENST00000637158 MROH1Q8NDA8 1641 aa28.61■■■□□ 2.17
CTSD-209ENST00000637158 KIF15Q9NS87 1388 aa28.61■■■□□ 2.17
CTSD-209ENST00000637158 ARHGAP31Q2M1Z3 1444 aa28.6■■■□□ 2.17
CTSD-209ENST00000637158 ERBINQ96RT1 1412 aa28.6■■■□□ 2.17
CTSD-209ENST00000637158 RRP7BPQ9NSQ0 103 aa28.57■■■□□ 2.16
CTSD-209ENST00000637158 ABCC5O15440 1437 aa28.55■■■□□ 2.16
CTSD-209ENST00000637158 CEP152O94986 1710 aa28.55■■■□□ 2.16
CTSD-209ENST00000637158 PRDM15P57071 1507 aaPredicted RBP28.53■■■□□ 2.16
CTSD-209ENST00000637158 KANK1Q14678 1352 aa28.53■■■□□ 2.16
CTSD-209ENST00000637158 SCAF11Q99590 1463 aaKnown RBP28.53■■■□□ 2.16
CTSD-209ENST00000637158 EID1Q9Y6B2 187 aa28.52■■■□□ 2.16
CTSD-209ENST00000637158 UBR1Q8IWV7 1749 aa28.52■■■□□ 2.16
CTSD-209ENST00000637158 PTPN23Q9H3S7 1636 aa28.51■■■□□ 2.15
CTSD-209ENST00000637158 TXNDC2Q86VQ3 553 aa28.51■■■□□ 2.15
CTSD-209ENST00000637158 LRRC7Q96NW7 1537 aa28.5■■■□□ 2.15
CTSD-209ENST00000637158 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.5■■■□□ 2.15
CTSD-209ENST00000637158 DAPK1P53355 1430 aa28.5■■■□□ 2.15
CTSD-209ENST00000637158 CFAP65Q6ZU64 1925 aaKnown RBP28.49■■■□□ 2.15
CTSD-209ENST00000637158 SYNMO15061 1565 aa28.49■■■□□ 2.15
CTSD-209ENST00000637158 SLIT1O75093 1534 aa28.48■■■□□ 2.15
CTSD-209ENST00000637158 CROCC2H7BZ55 1655 aa28.48■■■□□ 2.15
CTSD-209ENST00000637158 ARHGAP23Q9P227 1491 aa28.48■■■□□ 2.15
CTSD-209ENST00000637158 LTKP29376 864 aa28.47■■■□□ 2.15
CTSD-209ENST00000637158 ANKRD30AQ9BXX3 1397 aa28.47■■■□□ 2.15
CTSD-209ENST00000637158 FGD6Q6ZV73 1430 aa28.46■■■□□ 2.15
CTSD-209ENST00000637158 STAG3Q9UJ98 1225 aa28.46■■■□□ 2.15
CTSD-209ENST00000637158 MED1Q15648 1581 aaPredicted RBP28.45■■■□□ 2.14
CTSD-209ENST00000637158 ALKQ9UM73 1620 aa28.43■■■□□ 2.14
CTSD-209ENST00000637158 STRCP1A6NGW2 1772 aa28.42■■■□□ 2.14
CTSD-209ENST00000637158 TMEM2Q9UHN6 1383 aa28.41■■■□□ 2.14
CTSD-209ENST00000637158 LMTK2Q8IWU2 1503 aa28.4■■■□□ 2.14
CTSD-209ENST00000637158 CHIC2Q9UKJ5 165 aa28.4■■■□□ 2.14
CTSD-209ENST00000637158 PHF23Q9BUL5 403 aaPredicted RBP28.38■■■□□ 2.13
CTSD-209ENST00000637158 IDI1Q13907 227 aa28.36■■■□□ 2.13
CTSD-209ENST00000637158 PIK3C2BO00750 1634 aa28.36■■■□□ 2.13
CTSD-209ENST00000637158 KDM5AP29375 1690 aaKnown RBP28.35■■■□□ 2.13
CTSD-209ENST00000637158 EFCAB6Q5THR3 1501 aa28.33■■■□□ 2.13
CTSD-209ENST00000637158 SLC52A1Q9NWF4 448 aa28.33■■■□□ 2.13
CTSD-209ENST00000637158 ADGRL2O95490 1459 aa28.28■■■□□ 2.12
CTSD-209ENST00000637158 NOS1P29475 1434 aa28.28■■■□□ 2.12
CTSD-209ENST00000637158 KCNA6P17658 529 aa28.28■■■□□ 2.12
CTSD-209ENST00000637158 SENP3Q9H4L4 574 aaPredicted RBP28.28■■■□□ 2.12
CTSD-209ENST00000637158 FAM50AQ14320 339 aaKnown RBP28.25■■■□□ 2.11
CTSD-209ENST00000637158 RPRD2Q5VT52 1461 aaKnown RBP28.23■■■□□ 2.11
CTSD-209ENST00000637158 FAM135BQ49AJ0 1406 aa28.23■■■□□ 2.11
CTSD-209ENST00000637158 ANKRD50Q9ULJ7 1429 aa28.23■■■□□ 2.11
CTSD-209ENST00000637158 HDGFP51858 240 aaKnown RBP28.22■■■□□ 2.11
CTSD-209ENST00000637158 SLC26A8Q96RN1 970 aa28.22■■■□□ 2.11
CTSD-209ENST00000637158 TMEM94Q12767 1356 aa28.22■■■□□ 2.11
CTSD-209ENST00000637158 TET3O43151 1660 aa28.21■■■□□ 2.11
CTSD-209ENST00000637158 ADGRB3O60242 1522 aa28.21■■■□□ 2.11
CTSD-209ENST00000637158 PROSER2Q86WR7 435 aaPredicted RBP28.2■■■□□ 2.1
CTSD-209ENST00000637158 BCANQ96GW7 911 aa28.2■■■□□ 2.1
CTSD-209ENST00000637158 XIRP1Q702N8 1843 aaKnown RBP28.19■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms