RNA–Protein interactions for RNA: ENST00000636916.1

SMARCA2-255, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 111 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-255ENST00000636916 CPS1P31327 1500 aa20.22■□□□□ 0.83
SMARCA2-255ENST00000636916 CCNB3Q8WWL7 1395 aa20.21■□□□□ 0.83
SMARCA2-255ENST00000636916 VWDEQ8N2E2 1590 aa20.21■□□□□ 0.83
SMARCA2-255ENST00000636916 TIAM1Q13009 1591 aa20.19■□□□□ 0.82
SMARCA2-255ENST00000636916 SCAF1Q9H7N4 1312 aaKnown RBP20.19■□□□□ 0.82
SMARCA2-255ENST00000636916 DHX29Q7Z478 1369 aaKnown RBP20.19■□□□□ 0.82
SMARCA2-255ENST00000636916 TOM1O60784 492 aa20.18■□□□□ 0.82
SMARCA2-255ENST00000636916 TNRQ92752 1358 aa20.17■□□□□ 0.82
SMARCA2-255ENST00000636916 RTEL1-TNFRSF6BF6WH68 1400 aa20.17■□□□□ 0.82
SMARCA2-255ENST00000636916 PZPP20742 1482 aa20.16■□□□□ 0.82
SMARCA2-255ENST00000636916 STRCP1A6NGW2 1772 aa20.16■□□□□ 0.82
SMARCA2-255ENST00000636916 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.15■□□□□ 0.82
SMARCA2-255ENST00000636916 MED14O60244 1454 aa20.13■□□□□ 0.81
SMARCA2-255ENST00000636916 DEPDC5O75140 1603 aa20.12■□□□□ 0.81
SMARCA2-255ENST00000636916 KDM5DQ9BY66 1539 aa20.12■□□□□ 0.81
SMARCA2-255ENST00000636916 MTUS2Q5JR59 1369 aa20.11■□□□□ 0.81
SMARCA2-255ENST00000636916 KIF3BO15066 747 aa20.11■□□□□ 0.81
SMARCA2-255ENST00000636916 ANKLE2Q86XL3 938 aa20.11■□□□□ 0.81
SMARCA2-255ENST00000636916 MIA2Q96PC5 1412 aa20.1■□□□□ 0.81
SMARCA2-255ENST00000636916 NPHP4O75161 1426 aaPredicted RBP20.09■□□□□ 0.81
SMARCA2-255ENST00000636916 UGGT1Q9NYU2 1555 aa20.08■□□□□ 0.81
SMARCA2-255ENST00000636916 FAM135AQ9P2D6 1515 aa20.08■□□□□ 0.81
SMARCA2-255ENST00000636916 NLRP1Q9C000 1473 aa20.07■□□□□ 0.8
SMARCA2-255ENST00000636916 THEMISQ8N1K5 641 aaPredicted RBP20.07■□□□□ 0.8
SMARCA2-255ENST00000636916 IQGAP1P46940 1657 aa20.07■□□□□ 0.8
SMARCA2-255ENST00000636916 CEP162Q5TB80 1403 aa20.06■□□□□ 0.8
SMARCA2-255ENST00000636916 LRRC7Q96NW7 1537 aa20.06■□□□□ 0.8
SMARCA2-255ENST00000636916 WASHC2CQ9Y4E1 1318 aa20.05■□□□□ 0.8
SMARCA2-255ENST00000636916 EHBP1L1Q8N3D4 1523 aa20.05■□□□□ 0.8
SMARCA2-255ENST00000636916 CCDC141Q6ZP82 1450 aa20.04■□□□□ 0.8
SMARCA2-255ENST00000636916 RGS17Q9UGC6 210 aaPredicted RBP20.03■□□□□ 0.8
SMARCA2-255ENST00000636916 CAMSAP2Q08AD1 1489 aa20.02■□□□□ 0.8
SMARCA2-255ENST00000636916 ZC3H13Q5T200 1668 aaKnown RBP20.02■□□□□ 0.8
SMARCA2-255ENST00000636916 PHF23Q9BUL5 403 aaPredicted RBP20.01■□□□□ 0.79
SMARCA2-255ENST00000636916 XIRP1Q702N8 1843 aaKnown RBP19.99■□□□□ 0.79
SMARCA2-255ENST00000636916 RNF17Q9BXT8 1623 aaKnown RBP19.99■□□□□ 0.79
SMARCA2-255ENST00000636916 SENP3Q9H4L4 574 aaPredicted RBP19.99■□□□□ 0.79
SMARCA2-255ENST00000636916 ABCC3O15438 1527 aa19.97■□□□□ 0.79
SMARCA2-255ENST00000636916 SYNMO15061 1565 aa19.97■□□□□ 0.79
SMARCA2-255ENST00000636916 NCOA2Q15596 1464 aa19.97■□□□□ 0.79
SMARCA2-255ENST00000636916 ARHGEF5Q12774 1597 aa19.96■□□□□ 0.79
SMARCA2-255ENST00000636916 CFAP65Q6ZU64 1925 aaKnown RBP19.96■□□□□ 0.79
SMARCA2-255ENST00000636916 MROH1Q8NDA8 1641 aa19.95■□□□□ 0.78
SMARCA2-255ENST00000636916 RSPH4AQ5TD94 716 aa19.95■□□□□ 0.78
SMARCA2-255ENST00000636916 UBR1Q8IWV7 1749 aa19.95■□□□□ 0.78
SMARCA2-255ENST00000636916 ERVK-7P63135 1459 aa19.94■□□□□ 0.78
SMARCA2-255ENST00000636916 LTKP29376 864 aa19.91■□□□□ 0.78
SMARCA2-255ENST00000636916 CEP152O94986 1710 aa19.9■□□□□ 0.78
SMARCA2-255ENST00000636916 ARHGAP23Q9P227 1491 aa19.89■□□□□ 0.77
SMARCA2-255ENST00000636916 MAST1Q9Y2H9 1570 aa19.88■□□□□ 0.77
SMARCA2-255ENST00000636916 SCAF11Q99590 1463 aaKnown RBP19.87■□□□□ 0.77
SMARCA2-255ENST00000636916 EIF2AK4Q9P2K8 1649 aaKnown RBP19.87■□□□□ 0.77
SMARCA2-255ENST00000636916 SLIT1O75093 1534 aa19.86■□□□□ 0.77
SMARCA2-255ENST00000636916 TSPY4P0CV99 314 aa19.86■□□□□ 0.77
SMARCA2-255ENST00000636916 TSPY10P0CW01 314 aa19.86■□□□□ 0.77
SMARCA2-255ENST00000636916 POTEAQ6S8J7 498 aa19.85■□□□□ 0.77
SMARCA2-255ENST00000636916 TXNDC2Q86VQ3 553 aa19.82■□□□□ 0.76
SMARCA2-255ENST00000636916 FAM135BQ49AJ0 1406 aa19.82■□□□□ 0.76
SMARCA2-255ENST00000636916 ARHGAP31Q2M1Z3 1444 aa19.78■□□□□ 0.76
SMARCA2-255ENST00000636916 PIK3C2BO00750 1634 aa19.78■□□□□ 0.76
SMARCA2-255ENST00000636916 MAP3K1Q13233 1512 aa19.76■□□□□ 0.75
SMARCA2-255ENST00000636916 ROBO1Q9Y6N7 1651 aa19.76■□□□□ 0.75
SMARCA2-255ENST00000636916 LRRC9Q6ZRR7 1453 aa19.76■□□□□ 0.75
SMARCA2-255ENST00000636916 PRDM15P57071 1507 aaPredicted RBP19.76■□□□□ 0.75
SMARCA2-255ENST00000636916 TMEM94Q12767 1356 aa19.75■□□□□ 0.75
SMARCA2-255ENST00000636916 DUOX2Q9NRD8 1548 aa19.75■□□□□ 0.75
SMARCA2-255ENST00000636916 TET3O43151 1660 aa19.75■□□□□ 0.75
SMARCA2-255ENST00000636916 TMEM2Q9UHN6 1383 aa19.74■□□□□ 0.75
SMARCA2-255ENST00000636916 SETD1AO15047 1707 aaKnown RBP19.72■□□□□ 0.75
SMARCA2-255ENST00000636916 KANK4Q5T7N3 995 aaPredicted RBP19.72■□□□□ 0.75
SMARCA2-255ENST00000636916 RBM33Q96EV2 1170 aaKnown RBP19.72■□□□□ 0.75
SMARCA2-255ENST00000636916 KCNA6P17658 529 aa19.7■□□□□ 0.74
SMARCA2-255ENST00000636916 EID1Q9Y6B2 187 aa19.7■□□□□ 0.74
SMARCA2-255ENST00000636916 KDM5AP29375 1690 aaKnown RBP19.7■□□□□ 0.74
SMARCA2-255ENST00000636916 IDI1Q13907 227 aa19.68■□□□□ 0.74
SMARCA2-255ENST00000636916 MYOM3Q5VTT5 1437 aa19.68■□□□□ 0.74
SMARCA2-255ENST00000636916 SLC26A8Q96RN1 970 aa19.67■□□□□ 0.74
SMARCA2-255ENST00000636916 KIF15Q9NS87 1388 aa19.67■□□□□ 0.74
SMARCA2-255ENST00000636916 EFCAB6Q5THR3 1501 aa19.66■□□□□ 0.74
SMARCA2-255ENST00000636916 NWD1Q149M9 1564 aa19.66■□□□□ 0.74
SMARCA2-255ENST00000636916 CROCC2H7BZ55 1655 aa19.66■□□□□ 0.74
SMARCA2-255ENST00000636916 ABCC5O15440 1437 aa19.66■□□□□ 0.74
SMARCA2-255ENST00000636916 ERBINQ96RT1 1412 aa19.66■□□□□ 0.74
SMARCA2-255ENST00000636916 PROSER2Q86WR7 435 aaPredicted RBP19.65■□□□□ 0.74
SMARCA2-255ENST00000636916 RRP7BPQ9NSQ0 103 aa19.64■□□□□ 0.73
SMARCA2-255ENST00000636916 PHLPP1O60346 1717 aa19.63■□□□□ 0.73
SMARCA2-255ENST00000636916 VPS8Q8N3P4 1428 aa19.63■□□□□ 0.73
SMARCA2-255ENST00000636916 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.63■□□□□ 0.73
SMARCA2-255ENST00000636916 LMTK2Q8IWU2 1503 aa19.62■□□□□ 0.73
SMARCA2-255ENST00000636916 NKTRP30414 1462 aaKnown RBP19.61■□□□□ 0.73
SMARCA2-255ENST00000636916 NOS1P29475 1434 aa19.6■□□□□ 0.73
SMARCA2-255ENST00000636916 SLAIN2Q9P270 581 aa19.6■□□□□ 0.73
SMARCA2-255ENST00000636916 CHD2O14647 1828 aaKnown RBP19.6■□□□□ 0.73
SMARCA2-255ENST00000636916 COL16A1Q07092 1604 aaPredicted RBP19.59■□□□□ 0.73
SMARCA2-255ENST00000636916 STAG3Q9UJ98 1225 aa19.59■□□□□ 0.73
SMARCA2-255ENST00000636916 ADGRB3O60242 1522 aa19.58■□□□□ 0.73
SMARCA2-255ENST00000636916 LRP6O75581 1613 aa19.58■□□□□ 0.72
SMARCA2-255ENST00000636916 MYO5BQ9ULV0 1848 aa19.58■□□□□ 0.72
SMARCA2-255ENST00000636916 JCADQ9P266 1359 aa19.57■□□□□ 0.72
SMARCA2-255ENST00000636916 PTPN23Q9H3S7 1636 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms