RNA–Protein interactions for RNA: ENST00000636916.1

SMARCA2-255, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 111 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-255ENST00000636916 NISCHQ9Y2I1 1504 aa31.82■■■□□ 2.68
SMARCA2-255ENST00000636916 ABCC9O60706 1549 aa29.19■■■□□ 2.26
SMARCA2-255ENST00000636916 CCDC180Q9P1Z9 1646 aa28.72■■■□□ 2.19
SMARCA2-255ENST00000636916 DNAJC5BQ9UF47 199 aa27.94■■■□□ 2.06
SMARCA2-255ENST00000636916 RB1CC1Q8TDY2 1594 aa27.53■■■□□ 2
SMARCA2-255ENST00000636916 NACADO15069 1562 aa27.25■■□□□ 1.95
SMARCA2-255ENST00000636916 PABPN1Q86U42 306 aaKnown RBP eCLIP27.12■■□□□ 1.93
SMARCA2-255ENST00000636916 UNC13AQ9UPW8 1703 aa27.06■■□□□ 1.92
SMARCA2-255ENST00000636916 DCAF8L2P0C7V8 631 aa26.96■■□□□ 1.91
SMARCA2-255ENST00000636916 BICRAQ9NZM4 1560 aa26.89■■□□□ 1.9
SMARCA2-255ENST00000636916 MYO15BQ96JP2 1530 aa26.74■■□□□ 1.87
SMARCA2-255ENST00000636916 CC2D2AQ9P2K1 1620 aa26.37■■□□□ 1.81
SMARCA2-255ENST00000636916 CECR2Q9BXF3 1484 aa26.32■■□□□ 1.8
SMARCA2-255ENST00000636916 SHROOM4Q9ULL8 1493 aa26.32■■□□□ 1.8
SMARCA2-255ENST00000636916 ZCCHC6Q5VYS8 1495 aaKnown RBP26.27■■□□□ 1.8
SMARCA2-255ENST00000636916 DCAF1Q9Y4B6 1507 aa26.24■■□□□ 1.79
SMARCA2-255ENST00000636916 EIF4G1Q04637 1599 aaKnown RBP26.19■■□□□ 1.78
SMARCA2-255ENST00000636916 SCRIBQ14160 1630 aa26.15■■□□□ 1.78
SMARCA2-255ENST00000636916 DNAJC5Q9H3Z4 198 aa25.89■■□□□ 1.74
SMARCA2-255ENST00000636916 CUX2O14529 1486 aa25.31■■□□□ 1.64
SMARCA2-255ENST00000636916 NCAPD3P42695 1498 aa25.21■■□□□ 1.63
SMARCA2-255ENST00000636916 ERCC6Q03468 1493 aa25.14■■□□□ 1.61
SMARCA2-255ENST00000636916 ATAD2BQ9ULI0 1458 aa25.07■■□□□ 1.6
SMARCA2-255ENST00000636916 NESP48681 1621 aa25.01■■□□□ 1.59
SMARCA2-255ENST00000636916 HMGXB3Q12766 1538 aa24.95■■□□□ 1.58
SMARCA2-255ENST00000636916 SMARCA4P51532 1647 aa24.92■■□□□ 1.58
SMARCA2-255ENST00000636916 SMARCA2P51531 1590 aa24.9■■□□□ 1.58
SMARCA2-255ENST00000636916 THOC2Q8NI27 1593 aaKnown RBP24.83■■□□□ 1.57
SMARCA2-255ENST00000636916 BAZ1BQ9UIG0 1483 aaKnown RBP24.73■■□□□ 1.55
SMARCA2-255ENST00000636916 PEG3Q9GZU2 1588 aa24.7■■□□□ 1.54
SMARCA2-255ENST00000636916 BAZ1AQ9NRL2 1556 aaPredicted RBP24.67■■□□□ 1.54
SMARCA2-255ENST00000636916 LAMC3Q9Y6N6 1575 aa24.67■■□□□ 1.54
SMARCA2-255ENST00000636916 KIF21AQ7Z4S6 1674 aa24.65■■□□□ 1.54
SMARCA2-255ENST00000636916 MROH2BQ7Z745 1585 aa24.54■■□□□ 1.52
SMARCA2-255ENST00000636916 PDS5BQ9NTI5 1447 aa24.5■■□□□ 1.51
SMARCA2-255ENST00000636916 TRIM41Q8WV44 630 aa24.48■■□□□ 1.51
SMARCA2-255ENST00000636916 CADPSQ9ULU8 1353 aa24.39■■□□□ 1.49
SMARCA2-255ENST00000636916 MRC2Q9UBG0 1479 aa24.35■■□□□ 1.49
SMARCA2-255ENST00000636916 WDR62O43379 1518 aa24.35■■□□□ 1.49
SMARCA2-255ENST00000636916 WIZO95785 1651 aa24.24■■□□□ 1.47
SMARCA2-255ENST00000636916 CEP164Q9UPV0 1460 aa24.14■■□□□ 1.46
SMARCA2-255ENST00000636916 FANCD2Q9BXW9 1451 aa24.11■■□□□ 1.45
SMARCA2-255ENST00000636916 OSCARQ8IYS5 282 aa24.06■■□□□ 1.44
SMARCA2-255ENST00000636916 CFTRP13569 1480 aa24.04■■□□□ 1.44
SMARCA2-255ENST00000636916 URB2Q14146 1524 aaKnown RBP24■■□□□ 1.43
SMARCA2-255ENST00000636916 RIMBP3CA6NJZ7 1639 aa23.88■■□□□ 1.41
SMARCA2-255ENST00000636916 RIMBP3BA6NNM3 1639 aa23.88■■□□□ 1.41
SMARCA2-255ENST00000636916 RIMBP3Q9UFD9 1639 aa23.88■■□□□ 1.41
SMARCA2-255ENST00000636916 RSF1Q96T23 1441 aaPredicted RBP23.85■■□□□ 1.41
SMARCA2-255ENST00000636916 TOP2AP11388 1531 aaKnown RBP23.83■■□□□ 1.41
SMARCA2-255ENST00000636916 ZNF608Q9ULD9 1512 aaPredicted RBP23.79■■□□□ 1.4
SMARCA2-255ENST00000636916 PRDM2Q13029 1718 aa23.76■■□□□ 1.39
SMARCA2-255ENST00000636916 ARHGEF11O15085 1522 aa23.73■■□□□ 1.39
SMARCA2-255ENST00000636916 IFT140Q96RY7 1462 aa23.68■■□□□ 1.38
SMARCA2-255ENST00000636916 TOPBP1Q92547 1522 aa23.63■■□□□ 1.37
SMARCA2-255ENST00000636916 CCDC88BA6NC98 1476 aa23.61■■□□□ 1.37
SMARCA2-255ENST00000636916 EIF4G3O43432 1585 aaKnown RBP23.58■■□□□ 1.37
SMARCA2-255ENST00000636916 CYB5RLQ6IPT4 315 aa23.56■■□□□ 1.36
SMARCA2-255ENST00000636916 CHD1O14646 1710 aa23.52■■□□□ 1.36
SMARCA2-255ENST00000636916 ARAP1Q96P48 1450 aa23.49■■□□□ 1.35
SMARCA2-255ENST00000636916 TARBP1Q13395 1621 aaKnown RBP23.49■■□□□ 1.35
SMARCA2-255ENST00000636916 AQRO60306 1485 aaKnown RBP eCLIP23.49■■□□□ 1.35
SMARCA2-255ENST00000636916 DNMBPQ6XZF7 1577 aa23.47■■□□□ 1.35
SMARCA2-255ENST00000636916 ABCC8Q09428 1581 aa23.45■■□□□ 1.34
SMARCA2-255ENST00000636916 TRHP20396 242 aaPredicted RBP23.37■■□□□ 1.33
SMARCA2-255ENST00000636916 POLA1P09884 1462 aaPredicted RBP23.36■■□□□ 1.33
SMARCA2-255ENST00000636916 FBLN2P98095 1184 aa23.32■■□□□ 1.32
SMARCA2-255ENST00000636916 RAD54L2Q9Y4B4 1467 aa23.3■■□□□ 1.32
SMARCA2-255ENST00000636916 TDRD9Q8NDG6 1382 aaKnown RBP23.26■■□□□ 1.31
SMARCA2-255ENST00000636916 CLASP1Q7Z460 1538 aa23.24■■□□□ 1.31
SMARCA2-255ENST00000636916 SOGA1O94964 1423 aa23.21■■□□□ 1.31
SMARCA2-255ENST00000636916 SNAPC4Q5SXM2 1469 aa23.19■■□□□ 1.3
SMARCA2-255ENST00000636916 FGD5Q6ZNL6 1462 aa23.12■■□□□ 1.29
SMARCA2-255ENST00000636916 WDR97A6NE52 1622 aa23.11■■□□□ 1.29
SMARCA2-255ENST00000636916 SYNJ1O43426 1573 aa23.1■■□□□ 1.29
SMARCA2-255ENST00000636916 MAGI1Q96QZ7 1491 aaPredicted RBP23.08■■□□□ 1.29
SMARCA2-255ENST00000636916 CUX1P39880 1505 aa23.08■■□□□ 1.28
SMARCA2-255ENST00000636916 CHMP7Q8WUX9 453 aaPredicted RBP23.07■■□□□ 1.28
SMARCA2-255ENST00000636916 GRIN2BQ13224 1484 aa23.05■■□□□ 1.28
SMARCA2-255ENST00000636916 SYNJ2O15056 1496 aa23.03■■□□□ 1.28
SMARCA2-255ENST00000636916 AEBP2Q6ZN18 517 aaPredicted RBP22.98■■□□□ 1.27
SMARCA2-255ENST00000636916 GAPVD1Q14C86 1478 aa22.98■■□□□ 1.27
SMARCA2-255ENST00000636916 PBRM1Q86U86 1689 aa22.97■■□□□ 1.27
SMARCA2-255ENST00000636916 ERCC6L2Q5T890 1561 aa22.9■■□□□ 1.26
SMARCA2-255ENST00000636916 ABCA5Q8WWZ7 1642 aa22.87■■□□□ 1.25
SMARCA2-255ENST00000636916 ABCA10Q8WWZ4 1543 aa22.84■■□□□ 1.25
SMARCA2-255ENST00000636916 GRIN2AQ12879 1464 aa22.77■■□□□ 1.24
SMARCA2-255ENST00000636916 CEP170Q5SW79 1584 aa22.76■■□□□ 1.23
SMARCA2-255ENST00000636916 NUP160Q12769 1436 aa22.74■■□□□ 1.23
SMARCA2-255ENST00000636916 SHROOM2Q13796 1616 aa22.71■■□□□ 1.23
SMARCA2-255ENST00000636916 ADAMTS12P58397 1594 aa22.71■■□□□ 1.23
SMARCA2-255ENST00000636916 KIF13AQ9H1H9 1805 aa22.71■■□□□ 1.23
SMARCA2-255ENST00000636916 WRNQ14191 1432 aaPredicted RBP eCLIP22.6■■□□□ 1.21
SMARCA2-255ENST00000636916 FHAD1B1AJZ9 1412 aa22.59■■□□□ 1.21
SMARCA2-255ENST00000636916 BIVM-ERCC5R4GMW8 1640 aa22.57■■□□□ 1.2
SMARCA2-255ENST00000636916 TOP2BQ02880 1626 aa22.55■■□□□ 1.2
SMARCA2-255ENST00000636916 ERICH3Q5RHP9 1530 aa22.52■■□□□ 1.2
SMARCA2-255ENST00000636916 PRG4Q92954 1404 aaPredicted RBP22.52■■□□□ 1.2
SMARCA2-255ENST00000636916 JPH4Q96JJ6 628 aa22.47■■□□□ 1.19
SMARCA2-255ENST00000636916 ABCC10Q5T3U5 1492 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms