RNA–Protein interactions for RNA: ENST00000636157.1

SMARCA2-247, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 3,211 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-247ENST00000636157 DNTTIP2Q5QJE6 756 aaKnown RBP9.57□□□□□ -0.88
SMARCA2-247ENST00000636157 ZSCAN20P17040 1043 aaPredicted RBP9.57□□□□□ -0.88
SMARCA2-247ENST00000636157 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.57□□□□□ -0.88
SMARCA2-247ENST00000636157 PCF11O94913 1555 aaKnown RBP9.57□□□□□ -0.88
SMARCA2-247ENST00000636157 URB2Q14146 1524 aaKnown RBP9.56□□□□□ -0.88
SMARCA2-247ENST00000636157 FGD6Q6ZV73 1430 aa9.56□□□□□ -0.88
SMARCA2-247ENST00000636157 CHRM1P11229 460 aaPredicted RBP9.56□□□□□ -0.88
SMARCA2-247ENST00000636157 NAIPQ13075 1403 aa9.55□□□□□ -0.88
SMARCA2-247ENST00000636157 AQRO60306 1485 aaKnown RBP eCLIP9.55□□□□□ -0.88
SMARCA2-247ENST00000636157 OFD1O75665 1012 aa9.55□□□□□ -0.88
SMARCA2-247ENST00000636157 RRP1P56182 461 aaKnown RBP9.55□□□□□ -0.88
SMARCA2-247ENST00000636157 FMN1Q68DA7 1419 aa9.54□□□□□ -0.88
SMARCA2-247ENST00000636157 SKAP1Q86WV1 359 aa9.54□□□□□ -0.88
SMARCA2-247ENST00000636157 GTPBP4Q9BZE4 634 aaKnown RBP9.54□□□□□ -0.88
SMARCA2-247ENST00000636157 SLKQ9H2G2 1235 aaPredicted RBP9.54□□□□□ -0.88
SMARCA2-247ENST00000636157 LETM1O95202 739 aaPredicted RBP9.54□□□□□ -0.88
SMARCA2-247ENST00000636157 GRPEL1Q9HAV7 217 aa9.54□□□□□ -0.88
SMARCA2-247ENST00000636157 CUX1P39880 1505 aa9.54□□□□□ -0.88
SMARCA2-247ENST00000636157 PTPRKQ15262 1439 aa9.54□□□□□ -0.88
SMARCA2-247ENST00000636157 IRX3P78415 501 aaPredicted RBP9.53□□□□□ -0.88
SMARCA2-247ENST00000636157 TAF3Q5VWG9 929 aa9.53□□□□□ -0.88
SMARCA2-247ENST00000636157 TAOK2Q9UL54 1235 aa9.53□□□□□ -0.88
SMARCA2-247ENST00000636157 R3HCC1Q9Y3T6 440 aaKnown RBP9.53□□□□□ -0.88
SMARCA2-247ENST00000636157 FYCO1Q9BQS8 1478 aa9.53□□□□□ -0.88
SMARCA2-247ENST00000636157 HECW1Q76N89 1606 aa9.53□□□□□ -0.88
SMARCA2-247ENST00000636157 TOPBP1Q92547 1522 aa9.53□□□□□ -0.88
SMARCA2-247ENST00000636157 SPATA31E1Q6ZUB1 1445 aa9.53□□□□□ -0.88
SMARCA2-247ENST00000636157 KIF7Q2M1P5 1343 aa9.53□□□□□ -0.88
SMARCA2-247ENST00000636157 DHX29Q7Z478 1369 aaKnown RBP9.52□□□□□ -0.88
SMARCA2-247ENST00000636157 FAM161AQ3B820 660 aa9.52□□□□□ -0.88
SMARCA2-247ENST00000636157 CCDC94Q9BW85 323 aaPredicted RBP9.52□□□□□ -0.88
SMARCA2-247ENST00000636157 POLR3GLQ9BT43 218 aa9.52□□□□□ -0.89
SMARCA2-247ENST00000636157 UQCRHLA0A096LP55 91 aa9.51□□□□□ -0.89
SMARCA2-247ENST00000636157 UQCRHP07919 91 aa9.51□□□□□ -0.89
SMARCA2-247ENST00000636157 BECN1Q14457 450 aa9.51□□□□□ -0.89
SMARCA2-247ENST00000636157 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.51□□□□□ -0.89
SMARCA2-247ENST00000636157 MSNP26038 577 aaKnown RBP9.51□□□□□ -0.89
SMARCA2-247ENST00000636157 RGS22Q8NE09 1264 aa9.51□□□□□ -0.89
SMARCA2-247ENST00000636157 DENND4BO75064 1496 aaPredicted RBP9.51□□□□□ -0.89
SMARCA2-247ENST00000636157 E9PSI1 815 aa9.5□□□□□ -0.89
SMARCA2-247ENST00000636157 MAPK8IP2Q13387 824 aaPredicted RBP9.5□□□□□ -0.89
SMARCA2-247ENST00000636157 TPRNQ4KMQ1 711 aa9.5□□□□□ -0.89
SMARCA2-247ENST00000636157 ZSCAN30Q86W11 494 aa9.5□□□□□ -0.89
SMARCA2-247ENST00000636157 CASKIN1Q8WXD9 1431 aa9.49□□□□□ -0.89
SMARCA2-247ENST00000636157 SENP3-EIF4A1A0A087X0R7 540 aa9.49□□□□□ -0.89
SMARCA2-247ENST00000636157 DYNC1I1O14576 645 aa9.49□□□□□ -0.89
SMARCA2-247ENST00000636157 ZBTB22O15209 634 aa9.49□□□□□ -0.89
SMARCA2-247ENST00000636157 PNISRQ8TF01 805 aaKnown RBP9.49□□□□□ -0.89
SMARCA2-247ENST00000636157 ISY1Q9ULR0 285 aaKnown RBP9.49□□□□□ -0.89
SMARCA2-247ENST00000636157 VGFO15240 615 aaPredicted RBP9.49□□□□□ -0.89
SMARCA2-247ENST00000636157 BCCIPQ9P287 314 aaKnown RBP eCLIP9.49□□□□□ -0.89
SMARCA2-247ENST00000636157 CGNQ9P2M7 1197 aaKnown RBP9.49□□□□□ -0.89
SMARCA2-247ENST00000636157 LRPPRCP42704 1394 aaKnown RBP9.49□□□□□ -0.89
SMARCA2-247ENST00000636157 IGF1RP08069 1367 aa9.48□□□□□ -0.89
SMARCA2-247ENST00000636157 C8orf34Q49A92 452 aa9.48□□□□□ -0.89
SMARCA2-247ENST00000636157 RCAN3Q9UKA8 241 aa9.48□□□□□ -0.89
SMARCA2-247ENST00000636157 MIA2Q96PC5 1412 aa9.47□□□□□ -0.89
SMARCA2-247ENST00000636157 TRAK2O60296 914 aa9.47□□□□□ -0.89
SMARCA2-247ENST00000636157 MCM4P33991 863 aa9.47□□□□□ -0.89
SMARCA2-247ENST00000636157 L3MBTL2Q969R5 705 aa9.47□□□□□ -0.89
SMARCA2-247ENST00000636157 RNF216Q9NWF9 866 aaPredicted RBP9.47□□□□□ -0.89
SMARCA2-247ENST00000636157 TMC1Q8TDI8 760 aa9.46□□□□□ -0.89
SMARCA2-247ENST00000636157 GCC2Q8IWJ2 1684 aa9.46□□□□□ -0.89
SMARCA2-247ENST00000636157 FGD5Q6ZNL6 1462 aa9.46□□□□□ -0.89
SMARCA2-247ENST00000636157 CBX1P83916 185 aa9.46□□□□□ -0.9
SMARCA2-247ENST00000636157 CNKSR2Q8WXI2 1034 aa9.46□□□□□ -0.9
SMARCA2-247ENST00000636157 CFAP44Q96MT7 982 aa9.46□□□□□ -0.9
SMARCA2-247ENST00000636157 EIF4G3O43432 1585 aaKnown RBP9.45□□□□□ -0.9
SMARCA2-247ENST00000636157 CNPY4Q8N129 248 aa9.45□□□□□ -0.9
SMARCA2-247ENST00000636157 TEX14Q8IWB6 1497 aa9.45□□□□□ -0.9
SMARCA2-247ENST00000636157 EFCAB5A4FU69 1503 aa9.45□□□□□ -0.9
SMARCA2-247ENST00000636157 PBRM1Q86U86 1689 aa9.45□□□□□ -0.9
SMARCA2-247ENST00000636157 PDE3BQ13370 1112 aa9.44□□□□□ -0.9
SMARCA2-247ENST00000636157 KTN1Q86UP2 1357 aaKnown RBP9.44□□□□□ -0.9
SMARCA2-247ENST00000636157 ABCA10Q8WWZ4 1543 aa9.44□□□□□ -0.9
SMARCA2-247ENST00000636157 MYOM3Q5VTT5 1437 aa9.44□□□□□ -0.9
SMARCA2-247ENST00000636157 CARMIL1Q5VZK9 1371 aa9.44□□□□□ -0.9
SMARCA2-247ENST00000636157 RPRD2Q5VT52 1461 aaKnown RBP9.44□□□□□ -0.9
SMARCA2-247ENST00000636157 CCDC173Q0VFZ6 552 aa9.43□□□□□ -0.9
SMARCA2-247ENST00000636157 NBPF8Q3BBV2 869 aa9.43□□□□□ -0.9
SMARCA2-247ENST00000636157 CERS3Q8IU89 383 aa9.43□□□□□ -0.9
SMARCA2-247ENST00000636157 MAGI1Q96QZ7 1491 aaPredicted RBP9.43□□□□□ -0.9
SMARCA2-247ENST00000636157 AEBP1Q8IUX7 1158 aa9.43□□□□□ -0.9
SMARCA2-247ENST00000636157 ANTXR1Q9H6X2 564 aa9.43□□□□□ -0.9
SMARCA2-247ENST00000636157 BRD4O60885 1362 aaPredicted RBP9.43□□□□□ -0.9
SMARCA2-247ENST00000636157 DNAJC2Q99543 621 aaKnown RBP9.42□□□□□ -0.9
SMARCA2-247ENST00000636157 KDM2BQ8NHM5 1336 aa9.42□□□□□ -0.9
SMARCA2-247ENST00000636157 IRX5P78411 483 aaPredicted RBP9.42□□□□□ -0.9
SMARCA2-247ENST00000636157 FHOD3Q2V2M9 1422 aa9.42□□□□□ -0.9
SMARCA2-247ENST00000636157 CLASP1Q7Z460 1538 aa9.41□□□□□ -0.9
SMARCA2-247ENST00000636157 ROCK2O75116 1388 aaKnown RBP9.41□□□□□ -0.9
SMARCA2-247ENST00000636157 APPP05067 770 aa9.41□□□□□ -0.9
SMARCA2-247ENST00000636157 HDAC5Q9UQL6 1122 aa9.41□□□□□ -0.9
SMARCA2-247ENST00000636157 KCNJ4P48050 445 aa9.4□□□□□ -0.91
SMARCA2-247ENST00000636157 XPCQ01831 940 aaPredicted RBP9.4□□□□□ -0.91
SMARCA2-247ENST00000636157 CSPP1Q1MSJ5 1256 aa9.4□□□□□ -0.91
SMARCA2-247ENST00000636157 CENPQQ7L2Z9 268 aaPredicted RBP9.4□□□□□ -0.91
SMARCA2-247ENST00000636157 WWC1Q8IX03 1113 aa9.4□□□□□ -0.91
SMARCA2-247ENST00000636157 MTUS2Q5JR59 1369 aa9.4□□□□□ -0.91
SMARCA2-247ENST00000636157 SNAPC4Q5SXM2 1469 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms