RNA–Protein interactions for RNA: ENST00000636157.1

SMARCA2-247, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 3,211 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-247ENST00000636157 PELP1Q8IZL8 1130 aaKnown RBP13.26□□□□□ -0.29
SMARCA2-247ENST00000636157 NISCHQ9Y2I1 1504 aa13.2□□□□□ -0.3
SMARCA2-247ENST00000636157 MYT1Q01538 1121 aa12.97□□□□□ -0.33
SMARCA2-247ENST00000636157 HRCP23327 699 aa12.66□□□□□ -0.38
SMARCA2-247ENST00000636157 TTBK1Q5TCY1 1321 aaPredicted RBP12.36□□□□□ -0.43
SMARCA2-247ENST00000636157 PPARGC1BQ86YN6 1023 aaKnown RBP12.35□□□□□ -0.43
SMARCA2-247ENST00000636157 SCAF1Q9H7N4 1312 aaKnown RBP12.32□□□□□ -0.44
SMARCA2-247ENST00000636157 CCDC180Q9P1Z9 1646 aa12.17□□□□□ -0.46
SMARCA2-247ENST00000636157 PCGF6Q9BYE7 350 aa12.11□□□□□ -0.47
SMARCA2-247ENST00000636157 PRKCSHP14314 528 aaPredicted RBP12.06□□□□□ -0.48
SMARCA2-247ENST00000636157 BCL11AQ9H165 835 aa11.98□□□□□ -0.49
SMARCA2-247ENST00000636157 ACIN1Q9UKV3 1341 aaKnown RBP11.85□□□□□ -0.51
SMARCA2-247ENST00000636157 CENPBP07199 599 aaPredicted RBP11.84□□□□□ -0.51
SMARCA2-247ENST00000636157 FAM9AQ8IZU1 332 aaPredicted RBP11.84□□□□□ -0.51
SMARCA2-247ENST00000636157 SLC24A1O60721 1099 aa11.82□□□□□ -0.52
SMARCA2-247ENST00000636157 ERICH6Q7L0X2 663 aa11.81□□□□□ -0.52
SMARCA2-247ENST00000636157 GTF3C3Q9Y5Q9 886 aa11.8□□□□□ -0.52
SMARCA2-247ENST00000636157 MYO15BQ96JP2 1530 aa11.78□□□□□ -0.52
SMARCA2-247ENST00000636157 NEUROD1Q13562 356 aa11.77□□□□□ -0.53
SMARCA2-247ENST00000636157 ZEB1P37275 1124 aaPredicted RBP11.72□□□□□ -0.53
SMARCA2-247ENST00000636157 DCAF1Q9Y4B6 1507 aa11.7□□□□□ -0.54
SMARCA2-247ENST00000636157 SUPT5HO00267 1087 aaKnown RBP11.66□□□□□ -0.54
SMARCA2-247ENST00000636157 CHIC1Q5VXU3 224 aa11.65□□□□□ -0.54
SMARCA2-247ENST00000636157 APLP2Q06481 763 aa11.65□□□□□ -0.54
SMARCA2-247ENST00000636157 SHROOM4Q9ULL8 1493 aa11.62□□□□□ -0.55
SMARCA2-247ENST00000636157 ANP32EQ9BTT0 268 aa11.55□□□□□ -0.56
SMARCA2-247ENST00000636157 TRIM26Q12899 539 aaPredicted RBP11.53□□□□□ -0.56
SMARCA2-247ENST00000636157 CSRNP3Q8WYN3 585 aa11.43□□□□□ -0.58
SMARCA2-247ENST00000636157 DIEXFQ68CQ4 756 aaKnown RBP11.31□□□□□ -0.6
SMARCA2-247ENST00000636157 LOC105371045A0A1W2PR82 267 aa11.31□□□□□ -0.6
SMARCA2-247ENST00000636157 ZCCHC6Q5VYS8 1495 aaKnown RBP11.29□□□□□ -0.6
SMARCA2-247ENST00000636157 NACADO15069 1562 aa11.28□□□□□ -0.6
SMARCA2-247ENST00000636157 YTHDC1Q96MU7 727 aaKnown RBP11.23□□□□□ -0.61
SMARCA2-247ENST00000636157 RB1CC1Q8TDY2 1594 aa11.19□□□□□ -0.62
SMARCA2-247ENST00000636157 TSHZ2Q9NRE2 1034 aa11.18□□□□□ -0.62
SMARCA2-247ENST00000636157 DAXXQ9UER7 740 aaPredicted RBP11.16□□□□□ -0.62
SMARCA2-247ENST00000636157 ANO8Q9HCE9 1232 aaPredicted RBP11.16□□□□□ -0.62
SMARCA2-247ENST00000636157 EIF5BO60841 1220 aaKnown RBP11.12□□□□□ -0.63
SMARCA2-247ENST00000636157 ABCC9O60706 1549 aa11.06□□□□□ -0.64
SMARCA2-247ENST00000636157 SUPT16HQ9Y5B9 1047 aaKnown RBP11.05□□□□□ -0.64
SMARCA2-247ENST00000636157 CLSPNQ9HAW4 1339 aa11.04□□□□□ -0.64
SMARCA2-247ENST00000636157 UBE2Q2Q8WVN8 375 aa11.03□□□□□ -0.64
SMARCA2-247ENST00000636157 PLEKHG5O94827 1062 aa11.02□□□□□ -0.64
SMARCA2-247ENST00000636157 CCER1Q8TC90 406 aaPredicted RBP11.02□□□□□ -0.64
SMARCA2-247ENST00000636157 TRIM41Q8WV44 630 aa11□□□□□ -0.65
SMARCA2-247ENST00000636157 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.98□□□□□ -0.65
SMARCA2-247ENST00000636157 UNC13AQ9UPW8 1703 aa10.96□□□□□ -0.66
SMARCA2-247ENST00000636157 SALL2Q9Y467 1007 aaPredicted RBP10.95□□□□□ -0.66
SMARCA2-247ENST00000636157 MIER1Q8N108 512 aa10.93□□□□□ -0.66
SMARCA2-247ENST00000636157 ZNF316A6NFI3 1004 aaPredicted RBP10.92□□□□□ -0.66
SMARCA2-247ENST00000636157 CCDC136Q96JN2 1154 aa10.92□□□□□ -0.66
SMARCA2-247ENST00000636157 MYT1LQ9UL68 1186 aa10.9□□□□□ -0.66
SMARCA2-247ENST00000636157 RBM19Q9Y4C8 960 aaKnown RBP10.87□□□□□ -0.67
SMARCA2-247ENST00000636157 ERICH6BQ5W0A0 696 aa10.86□□□□□ -0.67
SMARCA2-247ENST00000636157 DEKP35659 375 aaKnown RBP10.86□□□□□ -0.67
SMARCA2-247ENST00000636157 PKNOX2Q96KN3 472 aa10.81□□□□□ -0.68
SMARCA2-247ENST00000636157 BICRAQ9NZM4 1560 aa10.81□□□□□ -0.68
SMARCA2-247ENST00000636157 MSH5O43196 834 aa10.8□□□□□ -0.68
SMARCA2-247ENST00000636157 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.77□□□□□ -0.68
SMARCA2-247ENST00000636157 BCANQ96GW7 911 aa10.77□□□□□ -0.69
SMARCA2-247ENST00000636157 PODXL2Q9NZ53 605 aa10.74□□□□□ -0.69
SMARCA2-247ENST00000636157 DCAF8L2P0C7V8 631 aa10.69□□□□□ -0.7
SMARCA2-247ENST00000636157 WRNQ14191 1432 aaPredicted RBP eCLIP10.68□□□□□ -0.7
SMARCA2-247ENST00000636157 FANCIQ9NVI1 1328 aa10.67□□□□□ -0.7
SMARCA2-247ENST00000636157 RSF1Q96T23 1441 aaPredicted RBP10.67□□□□□ -0.7
SMARCA2-247ENST00000636157 RTN4Q9NQC3 1192 aaKnown RBP10.66□□□□□ -0.7
SMARCA2-247ENST00000636157 FKBP8Q14318 412 aa10.65□□□□□ -0.7
SMARCA2-247ENST00000636157 IL27Q8NEV9 243 aa10.63□□□□□ -0.71
SMARCA2-247ENST00000636157 EHMT2Q96KQ7 1210 aa10.61□□□□□ -0.71
SMARCA2-247ENST00000636157 NEFLP07196 543 aa10.59□□□□□ -0.71
SMARCA2-247ENST00000636157 ITGAEP38570 1179 aa10.58□□□□□ -0.72
SMARCA2-247ENST00000636157 NBR1Q14596 966 aa10.57□□□□□ -0.72
SMARCA2-247ENST00000636157 AEBP2Q6ZN18 517 aaPredicted RBP10.54□□□□□ -0.72
SMARCA2-247ENST00000636157 RTL5Q5HYW3 569 aaPredicted RBP10.51□□□□□ -0.73
SMARCA2-247ENST00000636157 GLIPR1L2Q4G1C9 344 aa10.5□□□□□ -0.73
SMARCA2-247ENST00000636157 CDK11AQ9UQ88 783 aaPredicted RBP10.5□□□□□ -0.73
SMARCA2-247ENST00000636157 CEP162Q5TB80 1403 aa10.49□□□□□ -0.73
SMARCA2-247ENST00000636157 PEG3Q9GZU2 1588 aa10.48□□□□□ -0.73
SMARCA2-247ENST00000636157 NOP58Q9Y2X3 529 aaKnown RBP10.46□□□□□ -0.74
SMARCA2-247ENST00000636157 KLHL34Q8N239 644 aa10.45□□□□□ -0.74
SMARCA2-247ENST00000636157 ZMYND15Q9H091 742 aa10.45□□□□□ -0.74
SMARCA2-247ENST00000636157 EIF4G1Q04637 1599 aaKnown RBP10.44□□□□□ -0.74
SMARCA2-247ENST00000636157 TNIKQ9UKE5 1360 aa10.44□□□□□ -0.74
SMARCA2-247ENST00000636157 VSIG10Q8N0Z9 540 aa10.42□□□□□ -0.74
SMARCA2-247ENST00000636157 TIMELESSQ9UNS1 1208 aa10.42□□□□□ -0.74
SMARCA2-247ENST00000636157 SCRIBQ14160 1630 aa10.41□□□□□ -0.74
SMARCA2-247ENST00000636157 SMARCA2P51531 1590 aa10.39□□□□□ -0.75
SMARCA2-247ENST00000636157 HMGXB3Q12766 1538 aa10.38□□□□□ -0.75
SMARCA2-247ENST00000636157 PAK3O75914 559 aaPredicted RBP10.37□□□□□ -0.75
SMARCA2-247ENST00000636157 RSPH6AQ9H0K4 717 aa10.37□□□□□ -0.75
SMARCA2-247ENST00000636157 CC2D2AQ9P2K1 1620 aa10.36□□□□□ -0.75
SMARCA2-247ENST00000636157 KCNH8Q96L42 1107 aa10.35□□□□□ -0.75
SMARCA2-247ENST00000636157 A0A0U1RQG5 324 aaPredicted RBP10.34□□□□□ -0.75
SMARCA2-247ENST00000636157 HNRNPUL2Q1KMD3 747 aaKnown RBP10.34□□□□□ -0.75
SMARCA2-247ENST00000636157 C11orf95C9JLR9 678 aaPredicted RBP10.33□□□□□ -0.76
SMARCA2-247ENST00000636157 EEA1Q15075 1411 aa10.33□□□□□ -0.76
SMARCA2-247ENST00000636157 NCBP3Q53F19 620 aaKnown RBP10.32□□□□□ -0.76
SMARCA2-247ENST00000636157 PDE4CQ08493 712 aa10.31□□□□□ -0.76
SMARCA2-247ENST00000636157 PDIA4P13667 645 aaKnown RBP10.29□□□□□ -0.76
SMARCA2-247ENST00000636157 CCDC88BA6NC98 1476 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms