RNA–Protein interactions for RNA: ENST00000635652.1

PTPN11-206, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 3

Gene PTPN11, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-206ENST00000635652 ZNF142P52746 1687 aaPredicted RBP19.82■□□□□ 0.76
PTPN11-206ENST00000635652 FBXO31Q5XUX0 539 aaPredicted RBP19.82■□□□□ 0.76
PTPN11-206ENST00000635652 MYOM3Q5VTT5 1437 aa19.82■□□□□ 0.76
PTPN11-206ENST00000635652 KDM5DQ9BY66 1539 aa19.81■□□□□ 0.76
PTPN11-206ENST00000635652 MIA2Q96PC5 1412 aa19.8■□□□□ 0.76
PTPN11-206ENST00000635652 PKD2Q13563 968 aa19.8■□□□□ 0.76
PTPN11-206ENST00000635652 TNRQ92752 1358 aa19.78■□□□□ 0.76
PTPN11-206ENST00000635652 A2ML1A8K2U0 1454 aa19.78■□□□□ 0.76
PTPN11-206ENST00000635652 PLA2R1Q13018 1463 aa19.78■□□□□ 0.76
PTPN11-206ENST00000635652 FAM135AQ9P2D6 1515 aa19.77■□□□□ 0.76
PTPN11-206ENST00000635652 LTBP4Q8N2S1 1624 aa19.77■□□□□ 0.76
PTPN11-206ENST00000635652 PZPP20742 1482 aa19.77■□□□□ 0.76
PTPN11-206ENST00000635652 MAST1Q9Y2H9 1570 aa19.77■□□□□ 0.76
PTPN11-206ENST00000635652 DNMT1P26358 1616 aaKnown RBP19.75■□□□□ 0.75
PTPN11-206ENST00000635652 TCOF1Q13428 1488 aaKnown RBP19.74■□□□□ 0.75
PTPN11-206ENST00000635652 ZNF335Q9H4Z2 1342 aaPredicted RBP19.74■□□□□ 0.75
PTPN11-206ENST00000635652 RNF17Q9BXT8 1623 aaKnown RBP19.71■□□□□ 0.75
PTPN11-206ENST00000635652 PTPN23Q9H3S7 1636 aa19.69■□□□□ 0.74
PTPN11-206ENST00000635652 EIF2AK4Q9P2K8 1649 aaKnown RBP19.69■□□□□ 0.74
PTPN11-206ENST00000635652 CFAP65Q6ZU64 1925 aaKnown RBP19.69■□□□□ 0.74
PTPN11-206ENST00000635652 THEMISQ8N1K5 641 aaPredicted RBP19.69■□□□□ 0.74
PTPN11-206ENST00000635652 RRP7BPQ9NSQ0 103 aa19.69■□□□□ 0.74
PTPN11-206ENST00000635652 IQSEC2Q5JU85 1478 aa19.68■□□□□ 0.74
PTPN11-206ENST00000635652 ABCC3O15438 1527 aa19.68■□□□□ 0.74
PTPN11-206ENST00000635652 DUOX2Q9NRD8 1548 aa19.68■□□□□ 0.74
PTPN11-206ENST00000635652 ABCC5O15440 1437 aa19.68■□□□□ 0.74
PTPN11-206ENST00000635652 NLRP1Q9C000 1473 aa19.67■□□□□ 0.74
PTPN11-206ENST00000635652 ANKLE2Q86XL3 938 aa19.67■□□□□ 0.74
PTPN11-206ENST00000635652 ZC3H13Q5T200 1668 aaKnown RBP19.67■□□□□ 0.74
PTPN11-206ENST00000635652 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.67■□□□□ 0.74
PTPN11-206ENST00000635652 KIF15Q9NS87 1388 aa19.67■□□□□ 0.74
PTPN11-206ENST00000635652 POLR1AO95602 1720 aaPredicted RBP19.66■□□□□ 0.74
PTPN11-206ENST00000635652 UGGT1Q9NYU2 1555 aa19.66■□□□□ 0.74
PTPN11-206ENST00000635652 CROCC2H7BZ55 1655 aa19.65■□□□□ 0.74
PTPN11-206ENST00000635652 FGD6Q6ZV73 1430 aa19.64■□□□□ 0.73
PTPN11-206ENST00000635652 SHANK2Q9UPX8 1470 aa19.64■□□□□ 0.73
PTPN11-206ENST00000635652 CEP152O94986 1710 aa19.64■□□□□ 0.73
PTPN11-206ENST00000635652 MROH1Q8NDA8 1641 aa19.63■□□□□ 0.73
PTPN11-206ENST00000635652 DAPK1P53355 1430 aa19.63■□□□□ 0.73
PTPN11-206ENST00000635652 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.63■□□□□ 0.736e-8■□□□□ 10.4
PTPN11-206ENST00000635652 CHIC2Q9UKJ5 165 aa19.63■□□□□ 0.73
PTPN11-206ENST00000635652 UBAP1LF5GYI3 381 aa19.62■□□□□ 0.73
PTPN11-206ENST00000635652 SPATA31D1Q6ZQQ2 1576 aa19.61■□□□□ 0.73
PTPN11-206ENST00000635652 NEURL4Q96JN8 1562 aa19.61■□□□□ 0.73
PTPN11-206ENST00000635652 ERVK-7P63135 1459 aa19.6■□□□□ 0.73
PTPN11-206ENST00000635652 ERBINQ96RT1 1412 aa19.6■□□□□ 0.73
PTPN11-206ENST00000635652 FAM50AQ14320 339 aaKnown RBP19.58■□□□□ 0.72
PTPN11-206ENST00000635652 ANKRD30AQ9BXX3 1397 aa19.57■□□□□ 0.72
PTPN11-206ENST00000635652 KANK1Q14678 1352 aa19.57■□□□□ 0.72
PTPN11-206ENST00000635652 NPHP4O75161 1426 aaPredicted RBP19.56■□□□□ 0.72
PTPN11-206ENST00000635652 DISP3Q9P2K9 1392 aa19.56■□□□□ 0.72
PTPN11-206ENST00000635652 PRDM15P57071 1507 aaPredicted RBP19.56■□□□□ 0.72
PTPN11-206ENST00000635652 DEPDC5O75140 1603 aa19.54■□□□□ 0.72
PTPN11-206ENST00000635652 MED14O60244 1454 aa19.54■□□□□ 0.72
PTPN11-206ENST00000635652 CPS1P31327 1500 aa19.53■□□□□ 0.72
PTPN11-206ENST00000635652 ARHGAP31Q2M1Z3 1444 aa19.52■□□□□ 0.72
PTPN11-206ENST00000635652 IQGAP1P46940 1657 aa19.52■□□□□ 0.71
PTPN11-206ENST00000635652 SCAF1Q9H7N4 1312 aaKnown RBP19.51■□□□□ 0.71
PTPN11-206ENST00000635652 UBR1Q8IWV7 1749 aa19.51■□□□□ 0.71
PTPN11-206ENST00000635652 VWDEQ8N2E2 1590 aa19.49■□□□□ 0.71
PTPN11-206ENST00000635652 TOM1O60784 492 aa19.49■□□□□ 0.71
PTPN11-206ENST00000635652 PIP4K2BP78356 416 aa19.49■□□□□ 0.71
PTPN11-206ENST00000635652 TXNDC2Q86VQ3 553 aa19.49■□□□□ 0.71
PTPN11-206ENST00000635652 STAG3Q9UJ98 1225 aa19.49■□□□□ 0.71
PTPN11-206ENST00000635652 LTKP29376 864 aa19.46■□□□□ 0.71
PTPN11-206ENST00000635652 EID1Q9Y6B2 187 aa19.46■□□□□ 0.71
PTPN11-206ENST00000635652 SCAF11Q99590 1463 aaKnown RBP19.46■□□□□ 0.71
PTPN11-206ENST00000635652 ADGRL2O95490 1459 aa19.45■□□□□ 0.7
PTPN11-206ENST00000635652 PIK3C2BO00750 1634 aa19.44■□□□□ 0.7
PTPN11-206ENST00000635652 LMTK2Q8IWU2 1503 aa19.44■□□□□ 0.7
PTPN11-206ENST00000635652 IDI1Q13907 227 aa19.43■□□□□ 0.7
PTPN11-206ENST00000635652 ANKRD50Q9ULJ7 1429 aa19.42■□□□□ 0.7
PTPN11-206ENST00000635652 SLIT1O75093 1534 aa19.42■□□□□ 0.7
PTPN11-206ENST00000635652 ARHGAP23Q9P227 1491 aa19.41■□□□□ 0.7
PTPN11-206ENST00000635652 ILDR2Q71H61 639 aa19.41■□□□□ 0.7
PTPN11-206ENST00000635652 STRCP1A6NGW2 1772 aa19.41■□□□□ 0.7
PTPN11-206ENST00000635652 HSPA1LP34931 641 aa19.4■□□□□ 0.7
PTPN11-206ENST00000635652 TMEM2Q9UHN6 1383 aa19.4■□□□□ 0.7
PTPN11-206ENST00000635652 PPARGC1BQ86YN6 1023 aaKnown RBP19.39■□□□□ 0.69
PTPN11-206ENST00000635652 EFCAB6Q5THR3 1501 aa19.39■□□□□ 0.69
PTPN11-206ENST00000635652 SYNMO15061 1565 aa19.37■□□□□ 0.69
PTPN11-206ENST00000635652 LRRC7Q96NW7 1537 aa19.37■□□□□ 0.69
PTPN11-206ENST00000635652 NOS1P29475 1434 aa19.36■□□□□ 0.69
PTPN11-206ENST00000635652 ITGAEP38570 1179 aa19.36■□□□□ 0.69
PTPN11-206ENST00000635652 SLC52A1Q9NWF4 448 aa19.36■□□□□ 0.69
PTPN11-206ENST00000635652 KDM5AP29375 1690 aaKnown RBP19.35■□□□□ 0.69
PTPN11-206ENST00000635652 BCANQ96GW7 911 aa19.33■□□□□ 0.68
PTPN11-206ENST00000635652 SENP3Q9H4L4 574 aaPredicted RBP19.33■□□□□ 0.68
PTPN11-206ENST00000635652 RPRD2Q5VT52 1461 aaKnown RBP19.33■□□□□ 0.68
PTPN11-206ENST00000635652 ADGRB3O60242 1522 aa19.31■□□□□ 0.68
PTPN11-206ENST00000635652 TET3O43151 1660 aa19.31■□□□□ 0.68
PTPN11-206ENST00000635652 SLC26A8Q96RN1 970 aa19.31■□□□□ 0.68
PTPN11-206ENST00000635652 ROCK1Q13464 1354 aa19.31■□□□□ 0.68
PTPN11-206ENST00000635652 ALKQ9UM73 1620 aa19.3■□□□□ 0.68
PTPN11-206ENST00000635652 UNC13BO14795 1591 aa19.28■□□□□ 0.68
PTPN11-206ENST00000635652 GCC2Q8IWJ2 1684 aa19.28■□□□□ 0.68
PTPN11-206ENST00000635652 SOCS7O14512 581 aa19.28■□□□□ 0.68
PTPN11-206ENST00000635652 CHGAP10645 457 aaKnown RBP19.28■□□□□ 0.68
PTPN11-206ENST00000635652 MYO5BQ9ULV0 1848 aa19.27■□□□□ 0.68
PTPN11-206ENST00000635652 PPP1R15AO75807 674 aaPredicted RBP19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 171.1 ms